Xiphias gladius (swordfish): 120792904
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Entry
120792904 CDS
T07311
Symbol
acanb
Name
(RefSeq) aggrecan core protein
KO
K06792
aggrecan 1
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xgl00535
]
120792904 (acanb)
00536 Glycosaminoglycan binding proteins [BR:
xgl00536
]
120792904 (acanb)
04091 Lectins [BR:
xgl04091
]
120792904 (acanb)
Proteoglycans [BR:
xgl00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
120792904 (acanb)
Glycosaminoglycan binding proteins [BR:
xgl00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
120792904 (acanb)
Lectins [BR:
xgl04091
]
C-Type lectins
Group 1: Proteoglycan core proteins
120792904 (acanb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
EGF
Ig_3
PGDH_inter
I-set
Motif
Other DBs
NCBI-GeneID:
120792904
NCBI-ProteinID:
XP_039988234
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All DBs
Position
LG8:25309178..25321352
Genome browser
AA seq
1347 aa
AA seq
DB search
MTPLLLLCVSLPLISATILFEDLDDLDGTFRVSIPLEMPLRPLLGDKVVVPCYFQDNTVN
DPGAPNNALLSHRIKWSYVTKEKVTTILVASEGKVQVETEYLDRVTMVNYPLVANDATLE
ITELRSKDSGTYRCEVIHGIEDNYDSMDIQVQGIVFHYRAISTRYTLTFEKAKAACIQNS
ATIATPAQLQAAYDDGYHQCDAGWLSDQTVRYPIHEPRERCYGDKENFPGVRTYGVRDVN
ETYDVYCFAEKMSGRVFYSMSVEKFSFYEAGDQCAKLGARLATTGELYLAWKAGMDVCNA
GWLADRSVRYPINIARPQCGGGLLGVRTVYLFPNQTGYPYPDSHYDAICFQAGEYEAVVP
VRTTPFPDVIRITPAPGVYPGLTPLPGGEEIRGGEVDTLSPLPVPPSVTDTYTKVTPVVH
EPGLDLTGIDAAMGPTGVVFHYRPITGRYTLTFLEAQQACQSIGAVIASPQQLQAAFEKG
LHQCDAGWLRDQTVRYPIVSPRDNCAGNLPHLPGVRSYGLRPASELYDVFCYVEHLQGEV
FFTSDYDSFSYEEAVQHCQKLNTTLATTGQLYAAWNQGFDKCRPGWLLDRSVRYPITTPR
SHCGGGQVGVHIIYAYPNQTGFPDEHSRYDAYCFKAEVPAVDTETETFVNLTIETVDVIN
KTTVTVDHFAPTVETTVVYNETETSINITDTEVFINKTTITTHHVAPTVSSTLPPVPVDV
SGSGSADHSASGEISGESGTSSTSGDASGSGQGITYSGHTDIFSGDQSASGGLQEAEGGS
AVIFTSGELGSASGSGEGISGQQSGFSISGSGFTSGSGDISGSGDLMIIMVDGKMVEVSK
THGQPDEQVLGEGGIKIFESSTSGSGSTSGSGSGGFSGISFIDHSGIDATVQLSGEQEVS
GYRPSGSGGFSSGFPSGFSSGFPSGFPSGFPSGFPSGVSGSGSASGDTFQQRGDVIYVTD
EEMIEVTVPPLVRYPQQGRGVVEVSGSGSGSGIHHEFSGTLEQSLHVSGSGALHENPTAE
RLSVALPPGSTMTYSEYNDSPGQSGHGEEEQEGRTVEVVTPDAAYTSPTTAPSVSLASPV
VVEQPEVVEASADPCDPNPCGSGSCSAQGELAVCQCPKGFTGEDCSTPVQGCAEGWLEFM
GSCYLHFAERYTWSDAEQRCQELNAHLVSVGSQEEQEFVNSNGQDYQWIGLNDRDVQSEF
RWTDNSPLTFVNWRPNQPDNYFNSEEDCVVMIWHEGGQWNDVPCNYHLPFTCKTGPVMCG
APPEVEHGRPMGSTRERYPINSIVRYQCDAGYTQRHLPVIRCMPDGQWGEPQVECTEAGA
NSNRLHKRSLRRRSKGVSSQQEQRKLL
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atgacacccttgcttctgctgtgtgtgtccttgcccctcatctcagcaacaatattattt
gaagatcttgacgacttggatggcacgttccgtgtcagcatccctctggagatgcctctc
cgtcctctgctgggagacaaggtagtggtaccttgttacttccaggacaacaccgtcaac
gaccccggagccccaaataacgccctgctctcccaccgcatcaaatggtcctacgtcacc
aaggagaaagtcaccaccatcctggtggcgtcagagggaaaagttcaggtggagacagag
tatttggacagagtgacaatggtcaactaccccctggtggccaatgacgccaccttggag
ataacagaactgagatccaaagactctggcacctaccgctgcgaggtgatacacggtatc
gaggataactacgactctatggacatccaggttcagggtattgtgttccactaccgagcc
atctccacccgctacaccctgacgtttgagaaggccaaggcagcctgtatccagaacagt
gccaccatcgccacaccagcccagctccaggctgcctatgacgatggataccaccagtgt
gatgctgggtggctctctgatcaaactgttaggtaccccatccatgagccccgtgagcgc
tgctatggagacaaggagaactttccaggcgtgagaacctatggagtgagagacgtcaac
gagacctacgacgtgtactgttttgctgagaagatgtcaggcagggtcttctactccatg
tctgtagagaagttttctttctatgaagcaggggatcagtgtgccaaactcggcgcccgg
cttgctaccaccggagaactttacctggcctggaaggccggcatggatgtgtgcaatgct
ggctggctggcagacaggagcgtgcgctaccccattaacatcgccaggcctcagtgtgga
ggggggcttctgggagtgagaactgtctacctgttccccaaccagacaggatacccctac
ccggactctcactacgacgctatctgcttccaagctggtgagtatgaagctgtcgtgcct
gtgaggaccacccctttcccagacgtcatccgcataacacccgcccctggcgtgtaccca
ggcctcactcccctacctgggggtgaagagatcaggggtggagaagtggacaccctctcc
ccgctgcccgtcccacccagtgtgacggacacatacactaaagtgactcctgttgtacat
gagcctggactcgatctgacaggcatagatgctgccatgggtcccacaggtgtggtgttc
cactaccgacccatcactggtcggtacactctgaccttcctggaggctcagcaggcctgc
cagagtattggggcggtcattgcgagcccccagcagctgcaggcagcctttgagaaaggc
ctgcaccaatgcgacgccggctggctccgtgaccagactgtcaggtatccaatcgtgtca
cccagagataactgtgcaggtaatctgccacaccttccaggagtcaggtcctatggcttg
aggccagccagtgaactttacgatgtgttttgttatgtggaacatctgcaaggtgaggtc
ttcttcaccagtgactatgacagtttctcctatgaggaggctgtgcagcactgccagaaa
ctgaacaccaccctggccaccaccgggcagctgtacgccgcctggaaccaagggtttgac
aagtgccgtccaggctggctgttggaccgcagtgtccgctaccccatcaccacccccagg
tcccactgtggaggcggccaggtgggggttcacatcatctacgcctaccccaaccagaca
ggattccctgatgagcactcacgctatgacgcatactgtttcaaagccgaagttccagct
gtcgacactgaaactgagactttcgtaaatctgacaatagagactgtggacgttatcaac
aagacaacagtcacagtcgatcactttgctcccactgttgaaaccactgtagtctacaat
gaaaccgagaccagtataaatataactgatacagaggtgtttatcaacaagacaaccatc
acaactcaccacgttgctcctactgtgagttccactttacccccagtccctgttgatgtc
tcaggctctggttcagctgatcattcagccagcggggagatctcgggagagtctggcact
tccagtaccagtggtgacgccagtggttcaggacagggcatcacctacagcggacacact
gacatcttctccggagaccagtctgcctctggaggtctccaggaggcagaggggggaagt
gctgtcatcttcacatctggagaactgggtagtgcttccggatctggggaggggattagt
ggacaacagtctggcttcagcatttcaggatcaggttttaccagtggaagtggggatatc
agtggcagcggagacttgatgatcatcatggtcgatggaaagatggtggaggtgtcgaaa
acccacggacaacctgatgagcaggtgttaggcgagggaggcatcaagatatttgaatca
agtacatccggatcaggaagtacatcagggtcaggctctggtggattttctggcatctca
tttatcgaccacagtggcattgacgcgacagttcagctatccggtgagcaggaggtgtcc
ggatatcgtccttctggatcaggtggcttttccagcggctttcccagtggcttttccagc
ggctttcccagcggctttcccagcggctttcccagcggctttccatccggtgtttcaggg
agcggctctgcctctggagacacttttcagcaacgtggcgatgtcatctacgtaacagat
gaagagatgattgaagtgaccgtaccgccgctggtgcgctaccctcagcagggccggggg
gtggtggaggtaagcgggtcaggaagtgggtcagggatccaccatgaattcagcggcact
ttggagcaaagcttgcacgtctcaggaagcggggcccttcatgaaaacccaactgctgag
aggctttccgtcgccctgccacctggatcaacgatgacttactcagagtacaatgacagt
cctggtcaatcaggacatggggaggaggaacaggaaggccgcacagttgaagttgtgact
cccgacgcagcctacaccagcccaaccacagcaccgtctgtgtcattggcatcccctgtc
gtagtggagcagcctgaagtagtggaagcctctgcagacccttgtgatccaaacccctgc
ggttcaggatcctgctctgcgcagggagagcttgctgtatgccagtgtcccaagggcttc
actggtgaagactgctcaacaccggtacagggctgtgccgaaggctggctggagttcatg
ggcagctgttaccttcactttgcggagagatatacctggtctgatgctgagcagcgctgt
caggagctcaatgctcacctggtcagcgtcggctcccaggaggagcaggaatttgtcaac
tccaatggtcaggactaccagtggattggacttaatgacagagatgtgcagagtgagttc
cgctggacagacaacagtcctctgacctttgtgaactggaggcccaaccagccggataac
tacttcaactctgaggaggattgtgtggtgatgatctggcatgagggcggacagtggaat
gacgtgccctgcaactaccaccttcccttcacctgcaagaccggcccagtcatgtgcgga
gctccccccgaggtggaacatggccggccgatgggcagcaccagagagcgctaccccatc
aactctatagtccgctaccaatgtgatgcaggctacacacagcgccacctgcctgtcata
cgctgtatgccagacggacagtggggggaaccacaagtggaatgtacagaagccggcgcc
aacagtaaccggctacacaaaagatccctcaggagaagaagtaaaggggtcagcagccaa
caggaacagaggaagctgctctga
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integrated database retrieval system
