Xiphias gladius (swordfish): 120793043
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Entry
120793043 CDS
T07311
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04510
Focal adhesion
xgl04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120793043 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120793043 (lamb1a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
DUF7822
Motif
Other DBs
NCBI-GeneID:
120793043
NCBI-ProteinID:
XP_039988565
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Position
LG8:31593816..31639770
Genome browser
AA seq
1799 aa
AA seq
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MLGLQLAVLLALQVRTCAQEGGTLVSGDLDDVSLPELSDVCTEGSCYPATGDLLIGRAHQ
LSSTSTCGLNRPEPFCIVSHLQEEKKCFVCNSAAPYDELTNQTSSHRIENVVTTFAPNRL
KTWWQSENGLENITIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKTWQVYRYFAY
DCETSFPYISQGPMQKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRINDPYSPRIQNML
KITNLRVRFTKLHTLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPIQGAGQ
KREGMVHGHCMCNHNTKGLNCEQCQDFYHDLPWRPAEGRNTNACKKCNCNQHSDSCHFDM
AVFVASGNVSGGVCDDCQHNTAGHKCEQCKPFYYQHPERDVRDPNICQPCNCDPLGSLNG
GICDRMTDVRAGLIAGQCRCKVNVEGERCELCKQAHYGLSDEPEGCKACACSPVGTIPGG
NPCDSETGSCFCKRLVTGRDCDQCVSEHWGLSNDMDGCRPCDCDLGGAVNNHCDQVSGQC
ICRDHMFGRRCDQVESGFYFIALDHYTYEAEDAKFGPGVTVVPRPHPHDRSPTWTGIGLV
NVPEGAFLEFSVDNIPHSMEYDILIRYEPQLPDQWEEVLMTVMRPGPIRADSRCVNTVPD
DDNQMISLHPGSRYVVLPRSVCFESGLNYTIRLSLPLYSALSDVQSPYTLIDSIVLMPHC
KNLEIFTSSEGGDSSGNSGWETFQRYRCLENSQSVVKTPMTDICRNFIFSISAMLHQGAK
ECQCDPQGSLSTVCDPSGGQCQCRPNVVGRNCDRCAPATFQFGPNGCRACACDPQGSQSP
FCDQLTGQCVCVSGAYGRQCDRCLLGHWGFPTCRPCSCNGHADNCDPNTGHCINCRDHST
GHSCDRCLDGYYGDPVLGSGDHCRPCMCPDGPGSQRQFAGSCYRGEDSQQAICVCNAGYR
GSRCDECSPGYYGNPGEPGGQCQPCQCNNNIDMSDPQSCNAQTGECLNCLYHSEGAACQN
CKLGYYGNALLQDCRKCVCNQLGSAPSSCPSSGDCHCDRSSGQCHCLLNVVGQHCDRCAS
DTWNMASGRGCQTCDCDPKHSYGTSCNEISGQCSCHPGFGGRTCSECRELFWGDPEIKCH
ACDCDPRGISEQQCDKVSGHCVCVDGVSGPRCDVCARGFSGTFPDCHRCHQCFADWDDTI
GQLTNQTHRLVNKVNAIKASGVSGPYKKSIDSMERSVADIQVLLNQNPASQPLTEIQHLL
QQASELMRALSLMLNHTEQTLVQVEDQDSTAETKMNYLMSDAQKLERTVQELLDQVELIK
NSDIRGATDSITKYFLQSQAAEARANASTIDAKSPVETSGALRQLTEDKLNQTSEGFLRR
HTEHAQRLDDLAGELQTLDLSGISHKTCGSPSPDQDLCWNSLCGSLGCVDSEGQTRCGGD
GCEGVVTTANNIWRKAQESEQEIISAMEEVEKLSKMVSETKLKADEAKLSARDVLMKTNR
TKQKVDQSNAELRSLIRQIRDFLTQDAADLESIELVANEVLAMQMPTTPAQLQNLTEEIR
QKVGELGQVETILQQSADDIQRAENLLDQARRASEEAADVKDSAEKVKQALEEAQRAQTA
ASSAIQQAAADIQNTNNLLSSVQSETAVAELKLNNATQRLQRLEQDVTLLRDKALNVSLS
SEQTNQDAASIRKIAEEVKKDLDSDLKDKYSRVGQLIGQKAGGVADAKKRAELLQQEAKE
LLLQASDKLQLLKDLEKSYKDNQRTLEVKVELLVDLEAAVKELLQEISHKVTVYSTCLF
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgttggggcttcagctcgcggtgctgctcgctctgcaggtgcgtacctgtgctcaagag
ggggggaccttggtgagcggtgacctggatgatgttagccttcccgagctcagtgacgtc
tgcactgagggcagctgttaccctgcaacaggagacctactgattggccgagcccaccag
ctgtcgtccacctccacctgtggtctgaaccgacctgaaccgttctgcattgtcagccac
ttgcaggaagagaagaagtgttttgtgtgcaactcggcggcaccctatgacgagttgacc
aatcagacgagcagccatcgcattgagaatgttgtaacaacattcgctccgaacagactg
aagacatggtggcagtccgagaacggtctggagaacattaccatccagctaaacctggag
gctgagtttcactttacacacctcatcatgaccttcaagacgtttcgtcctgctgcgatg
gtgatcgagcggtcagctgacttcgggaagacgtggcaggtttatcgttattttgcctac
gactgtgagacgtccttcccctacatttcccagggtccaatgcagaaggtcgatgatgtc
atctgtgactcgcgttactcagacatcgagccatccactgagggagaggtgattttcaga
gttctggacccggcgttcaggatcaacgacccctacagccccagaatccagaacatgttg
aaaatcaccaacctgcgggtgaggttcaccaaactgcacacgcttggagacaatctgctg
gactctcgaatggagatcaaagagaagtattactacgccatctacgacatggtggtgcga
ggaaactgcttctgctatggacacgcctctgagtgtgcccccatccagggagctggacag
aaaagggagggtatggttcatggtcactgcatgtgtaaccataacactaaaggtctgaac
tgtgaacagtgtcaggatttctaccacgaccttccctggagaccagccgagggacgcaac
accaacgcctgcaagaagtgtaactgtaaccagcattcggactcatgtcacttcgacatg
gccgtgttcgtggcttcaggaaatgtcagtggaggtgtttgtgatgactgtcaacacaac
acagccggacacaaatgtgagcagtgtaaaccgttttactaccaacatccagagagagat
gtcagagaccccaacatctgccaaccctgtaattgtgaccctctgggctctctgaatgga
ggaatatgtgaccggatgacagacgttcgagctggtctaattgccggccaatgtcgctgt
aaagtcaatgtggagggagaacgctgcgagctctgcaaacaggcacattacggactgagt
gacgagcccgaaggctgtaaagcgtgtgcctgcagccctgtgggaacaattcctggagga
aatccctgtgacagtgaaacaggaagttgtttctgtaaacgtcttgtgactggacgagat
tgtgaccagtgtgtgtctgaacactggggtctcagtaatgatatggacggctgcagacca
tgtgactgtgatctaggaggagctgtcaacaaccattgtgatcaggtgagtggtcaatgc
atctgcagagatcacatgttcggtcgacgctgcgatcaggtcgagtctggattctacttc
atcgctctggatcactacacctacgaggctgaggatgccaaatttggaccaggagtgaca
gtggtgccaaggccccaccctcatgaccgtagtcccacctggacaggtattggcctggtc
aacgtcccagagggggccttcctggagttctctgtggataacatccctcactccatggag
tacgacatcctaatccgctacgagcctcagctgcctgaccaatgggaggaggtcctgatg
acagtgatgaggcctggaccaatcagagcagacagccgctgtgttaacactgtacctgat
gatgacaaccagatgatctctcttcaccctggctcacggtatgtggttcttcccagatcg
gtttgttttgaatctggtctgaactacaccatccgcctcagcctaccgctgtactcggcc
ctcagtgatgtccaatctccatacacactcatcgactcgatcgtgttgatgccgcactgt
aagaacctggagatctttacgtcctcagagggaggagactccagtgggaacagtggctgg
gaaactttccagcgttatcgttgtctagagaacagccagagcgtcgttaagacgccaatg
acagacatctgcagaaacttcattttcagcatctccgctatgttgcaccagggagctaaa
gaatgccagtgtgaccctcagggctccctcagcaccgtgtgtgaccccagtgggggtcaa
tgtcagtgtcgccccaacgtggtcggccggaactgtgacagatgtgctccagccacgttc
caatttggacccaatggctgcagagcatgtgcatgcgaccctcagggttcacagagtccg
ttttgtgatcagctcaccggtcagtgtgtttgtgtttcgggagcgtatggtcgacagtgt
gatcgctgtcttctgggtcactggggttttcccacctgccgaccctgctcctgcaatgga
catgccgacaactgtgaccccaacaccgggcactgcatcaactgtagggaccacagcacc
ggacacagctgtgacaggtgtctggatgggtactacggtgacccagtgttggggtcaggt
gatcactgtcgtccctgcatgtgtcccgacggccccggcagccagcggcagtttgcagga
agttgttaccgtggcgaagactcccagcaggctatatgtgtctgcaacgccggatacaga
ggttctcgttgtgacgagtgctcaccgggttactatggaaaccctggtgagccggggggg
cagtgtcagccctgtcagtgcaacaacaacattgacatgtcggacccacagtcttgtaat
gctcaaaccggcgagtgtctgaactgcctgtaccacagtgagggtgccgcctgccagaac
tgcaaactgggttactacggcaatgctctgctgcaggactgcaggaagtgtgtttgtaac
cagttgggcagcgctccctccagctgtccatcatccggcgactgtcactgcgaccgcagc
agcggtcagtgtcactgcctcctgaatgtagttggccaacactgtgaccgctgtgcgtct
gacacctggaacatggcgagcggccgtggctgtcagacctgcgactgcgaccccaaacat
tcgtatgggacatcctgcaatgagattagcggtcagtgttcatgtcacccgggtttcgga
ggtagaacatgcagcgagtgtagagagctgttctggggagacccagagatcaaatgtcac
gcgtgtgactgtgatcctcgtggtatctccgagcagcagtgtgacaaagtcagcggtcac
tgcgtctgtgtggatggagtgtccggaccgcgctgtgatgtctgtgcccgtggattctca
ggaaccttccctgactgccaccgctgccaccagtgcttcgctgattgggacgacaccatt
ggtcagctgaccaatcagacacaccgccttgtcaacaaggtcaacgccatcaaagccagt
ggagtcagtggaccgtacaagaagtcaattgacagcatggagagaagcgtagccgacatc
caggtcctcctaaatcagaacccggcctcgcaaccgctgactgagatccagcacctgctg
caacaggccagtgaactgatgagggccctgagcctgatgttgaaccacacggaacagact
ctggtccaggtggaggatcaggactcaacagcagagactaaaatgaactatctgatgtca
gatgctcagaaactggagcgaaccgttcaggagctgctggatcaggtcgagttaatcaaa
aactctgacatcagaggggcgacggacagcatcactaagtacttcctgcagtctcaggca
gctgaagctcgagccaacgcctccaccatcgatgccaagagccccgtggaaacttctggg
gctctacggcaactcacagaggacaaactgaaccaaaccagcgaggggttcctgaggaga
cacactgagcatgctcagagactggacgacctagcaggggagctgcaaactctggaccta
tcagggatcagccataagacctgtggcagtccatcaccggatcaggatttgtgctggaac
tctctctgtggaagtctaggctgtgtggactctgagggtcagaccaggtgtggaggtgac
ggatgtgagggcgtggtgacgacagccaacaacatctggagaaaggctcaagaatcggaa
caggaaatcatcagcgccatggaggaagtggaaaaactgtccaagatggtgtcagagacc
aagctgaaggcagacgaagcaaagctgagcgctcgtgacgtcctgatgaagaccaacaga
accaaacagaaagtcgaccagagcaatgcggagctgagaagtctcatcagacagatcaga
gactttctaacacaggatgctgcggacctggagagcatcgagctggtggctaatgaggtt
ctggctatgcaaatgccaaccacaccggctcagctgcagaacctgactgaagaaatccgg
cagaaggtgggagaactgggacaagtggagaccatcctgcagcagagtgccgacgacatc
cagagagccgagaacttgctggaccaggcccgtcgagccagtgaggaggcagctgatgtt
aaggactctgcagagaaggtgaagcaagctctggaagaagctcagagagctcagacagct
gccagcagtgccatccagcaggctgccgccgacatccagaacaccaacaacctgctgtcc
tccgtgcagtcagagacagcagttgcagagttaaagttgaacaatgccacccagaggctg
caaaggctcgagcaggatgtaacgctgctgagagacaaagctctgaatgtctctctgagc
tccgaacagaccaatcaggacgcagcaagcatcagaaagatcgctgaggaggtgaagaag
gatctggactcagacctgaaggataagtattccagagtgggtcagctgattggtcagaag
gcaggaggtgtggctgatgccaagaagagggcagagttactgcagcaagaagccaaagag
ctgttgttgcaggcaagcgacaagctgcagctgctgaaagatctggagaagtcgtacaaa
gacaaccagcggactctggaggtgaaggtggagctgctagtggaccttgaggccgctgtg
aaggagctgctgcaggagatcagccacaaggtcaccgtttatagtacctgtctgttctag
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integrated database retrieval system