Xiphias gladius (swordfish): 120793050
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Entry
120793050 CDS
T07311
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xgl03036
]
120793050 (chd9)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120793050 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
HTH_CHD1_Hrp3
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
120793050
NCBI-ProteinID:
XP_039988593
LinkDB
All DBs
Position
LG1
Genome browser
AA seq
3028 aa
AA seq
DB search
MDFFDDPSLFVGGLEGLDEDGFPSAPSLVDELNLSADFEPLQVEPLGPGKHQDIMPPVST
QQLMPTYSQQMGHYIGIKAQNPTGQAFSGPGCTGGGGGGMMPEQHGQYHNTAMGQVPQSN
GLFCNSSSPMWGNQDQNGNMYQPMSQQQQHQQQQLCHQQQQLHNQQLHVRQQQIQQQQQH
PCHHQQEQQHRMRQQQLQQQQSHQQQLLNQCQHQQINTQTMSLQQQQHHNFSFHQGSQSQ
SQQQVHHSQQRVQHQLTVGAPRFQSRALPSKSYLDNQNASLSGTCLQQHQQQQQQHSSYQ
LTRGGQAFSGPGPEDPNLPFPMHSSSMVHSLPTCSVSSTTAYQPPQYPAYPGEPEIPSID
QQSLSSSSVSGPTTTTTAPLTSTVPELSGPVCQFPSTGVMSLQHTRIPVSQAEECPFRAL
RCSGETQGNCRSSEMFGESMSCYPSMTSQMPSEQSQSCGAINTNGYQALEDSLLTSEAQD
GDLEGLESPDLLPDLLPQLEAALSQQDESSCSWADSSLERGHEHRKPPPVEYKEEKPRKN
ANGPGSQVRVLSPPVKSSSSSSSSSSSSSSSSSSSSEKRTPRRTHHQMESTSQDKQEKAN
RIISEAIAKARQRGEKNIPRVMSPESFPSSSSQYKTHRDREHKGNGKARPKEKACRKACI
VPSSKPKQKAKIGKIVIKIGKKKKRKTESSEEESDDDPPPRHTSKEDDSKRRSNRQVKRK
KYAEELEARLSDEEVKVIVKAKKTNAAASKEPAVQLFVENPSEEDAAVVDKIMSSRIIKK
EVTPGVVVEVEEFFVKYKNYSYLHCEWATEQQLEKDKRIQQKIKRFKMKQAQRALFFADM
EEDPFNPDYVEVDRVLEVSYCEDKDTREEVVYYLVKWCSLPYEDSTWELKDDVDQSKIEE
FEQLQAAKPDSRRVERPPANLWKKREQSRKYRNGNSLRDYQLEGVNWLLFNWYNRRNCIL
ADEMGLGKTIQSITFLEEIYRVGIKGPFLIIAPLSTIANWEREFRTWTHLNVIVYHGSMV
SRQMLQQYEMYFRDAQGRVMRGAYRFQAVITTFEMILGGCPELNAIEWRCVIIDEAHRLK
NKNCKLLEGFKLMSLEHKVLLTGTPLQNTVEELFSLLHFLEPARFPSENTFMQEFGDLKT
EEQVQKLQGILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLAK
GAGQANMPNLVNTMMELRKCCNHPYLIKGAEDKILEDFREVYSPTAIDFHLQAMVQSAGK
LVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDR
FSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKV
YRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSLGGGAGGGAVQQQLSKKEIEDLL
RRGAYGAIMDEEDEGAKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDIA
LDDPNFWDKWAKKADIDMDMVNGRNSLVIDTPRVRKQTRPFSATKDELAELSEGESDSDD
TKPKLRRNHDRLNSYGRTECFRVEKNLLVYGWGRWKDILNHGRFKKQLTEWDVESICRAL
LAYCLVHYRGDDKIKSFMWDLIAPSEDGRTKELQNHLGLSAPVPRGRKGKKMKTQSSSFD
IHKAEWLRKHNPEHMLQDDGYKKHLKHHCNKVLLRVRMLYYLKQEVIGNQAQKVLDGSDS
SEIKIWVPEPDHSELPALWWDAISDKCLLLGVYKHGYEKYNTIRADPTLCFLDRVGRPDE
KAIAAEQRGNDFMDGDVDDPEYKPAPALLKDDMEDDASSPGDLVVTDNAGDAVPVTEGET
AYWPSSSVLTARLRRLITASQRYTKSRQILHIHQAQSQSQQTMILSAPLCPLPPTLKDTL
NPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPNLGRFDWTKFRAMARLHKKTDESLQ
KYLCAFTAMCRRVCRLPPKEGDSAVDPSLNIQPITEERASRTLYRVELLRQVREQVLRHS
LLYERLSLCQMSSDLPVWWEAGTHDRDLLIGAAKHGVSRTDYHILRDPELSFMAAHRNYS
QTKAAQQQSRTSTPHLQPQHQATSSVLTGSPLPLAAQRETEPCGVVPKVEPTSEGEESRE
KGGESWSPPRVPATPTGLEEKPVSETRDNERQMVAARTKPLTPNSSERKPKKASKRGRRE
ARRGSESNSDGSSSSSSSRSSSSSSSSSSSSSHSGSSSSSSSSSCSSGSSSSSSSSSSSS
EDSESEGEEGKKKVPAATSVKGFDEDSVASLSTTQDETQDTHVAENGITNSTSHPLQGGG
YMLAASYWPKDRVIINRLDSICQAVLKGKWPGTRRVYEPGGAVASFYTTKLLDSANSLCE
DPSASPQGSKVTKHVAENKEFSVKLNDQEGGLKLTFQKQGLPLKRPLESEEGPQAQQQYL
ARLHELQSASDTGLADITKPQCSFQTGLTGQMRLNGVLDGQPVVKKRRGRRKNVEGMDLL
FMNRGRAPAVPDQVPPGWGGIGQVGMAVAPAPGYSQSSSQVPADTESRVPVINLKDGTRL
AGDDAPRRKDLEQWLKEHPGFVADTGAFIPGVNKMQMQFHFQDGRPKQKRHRCRNPNKID
VNSLTGEERVQIINRRNARKVGGAFAPPLKDLCRFLQENPEYGVPPEWADVVKQSGYLPE
SMFDRILTGPIVPEEVSRRGRRPKNPLAKAAAAAAAAAPNTAASALGLNPLLANGLLSGM
DLTSLQAFQQNLQSLQSLQLTAGLMALPSDASNLAASNLAAMFPMMLSGMAGLPNLLGMS
SLLGKPAQEGAGGSEEKTKGTASGATGEPSASEAPSHTSDTKGERTEGLNTTPSSTSSSS
SSATAPQSASAASAASSHPLSLNPLLLSSMLYPGMLLTPGLNLPVSAAQPQSSNSDPTLA
PAPHPPLPAASKSLPQETERPAAEKDGEEEEEALDEALDEALDEEEEEESAEQKENSGPE
GSRKAESSSSESGSSSSSSDDSDSSDED
NT seq
9087 nt
NT seq
+upstream
nt +downstream
nt
atggacttctttgatgatcccagcctctttgttggtggtttggaaggtctggatgaggat
gggtttccctctgcaccatcacttgtggatgagctaaacctcagtgccgactttgagccc
ctccaagtggagcctctaggcccagggaagcaccaagacataatgccaccagtttctacc
caacaactcatgcccacttatagtcagcaaatgggtcactacattggcattaaggctcag
aatcctacagggcaggcattctctggtcctgggtgcacaggtggtggagggggtggcatg
atgccagaacaacatggccagtaccacaacaccgccatgggccaagtacctcaatctaat
gggctgttctgtaacagtagtagtccaatgtggggcaaccaagaccagaatgggaatatg
taccagcccatgtctcaacagcagcaacatcagcaacaacagctttgtcatcagcagcag
caactgcacaaccagcaacttcatgtcagacaacaacaaatacaacagcagcaacagcac
ccctgtcatcatcaacaggagcaacagcacagaatgcggcaacagcagctgcaacaacag
caaagtcatcagcaacagctgttaaaccagtgccagcaccaacaaattaacacgcagact
atgtccctgcagcaacagcagcatcacaatttctcctttcaccagggaagtcagtctcag
agccaacagcaagttcaccatagtcagcaacgtgttcagcaccaactaaccgtaggagca
ccaaggttccaatcaagggctctgccaagtaagtcctatttggataatcagaatgcttct
ctgagtggaacttgcttacagcaacatcagcagcagcagcagcagcatagtagctaccag
ttgaccaggggaggccaagccttctctgggcccgggccggaagacccgaacctgcccttc
cccatgcattcatcatctatggttcactccctgcccacatgctcagtcagttctaccact
gcttaccaaccacctcagtaccccgcttaccctggagagccagaaatacccagtatcgat
cagcagtctttgtcctcatcctcagtgtctgggcccaccaccaccaccactgctcccctc
acttccacagtgcctgagctctcagggccagtttgtcagtttccatccacaggggttatg
agtctgcagcacaccaggatcccagttagccaggcagaagaatgtcctttccgggcccta
cgttgttctggagaaacccagggaaactgcaggtcatctgagatgtttggtgaatctatg
agctgctaccccagcatgaccagccagatgccctctgagcagtctcagagctgcggggcc
atcaacactaatggataccaggctttggaagatagtctcctgacatcagaggctcaggat
ggagacttggagggactggagtctcctgacctcttgcctgacctactgccccagctcgag
gctgctctcagccaacaggatgaatccagctgttcctgggccgattctagcctggaaagg
ggacatgagcacaggaaaccaccgcctgttgagtacaaagaagagaagccccgaaagaac
gctaatggtcccggtagccaggtacgggtcctcagtcccccagtgaagagcagctcatcg
tcctcctcctcttcctcatcgtcttcgtcctcatccagctcctcatcggagaagaggacg
ccacggaggacgcatcatcagatggagtcaacttcgcaggacaagcaggagaaggccaat
aggataatatcagaggctattgcaaaggcccggcagcgtggggagaagaacatcccccga
gttatgagccccgagagcttccccagctcgtcctctcagtacaagacccaccgtgaccgc
gagcacaaaggaaacggcaaggcacggcccaaagagaaggcttgtcggaaggcctgcatt
gtaccctcctccaagcccaagcagaaggccaagatagggaaaattgtcatcaagattgga
aagaagaaaaagcgaaagacggagtcttcagaggaggagtcggatgatgacccaccccct
cgacacacttctaaagaagacgactctaagaggagatctaatcgccaggtgaagagaaag
aagtacgctgaggagctggaggccaggttgtcagacgaggaagtcaaggttattgtcaaa
gccaagaaaaccaacgctgcagcatccaaggagcctgctgttcaactgtttgtagagaat
ccaagtgaggaggatgccgctgttgttgacaaaatcatgtcttctcgtatcattaagaag
gaggtcactccaggagtggtggtcgaagtggaagagttttttgtaaaatacaaaaactac
tcctacctacactgtgagtgggccacagagcaacagctggagaaggacaagaggattcag
cagaagatcaaacgcttcaagatgaaacaagcacagagggcactcttctttgcagatatg
gaagaggatccctttaaccctgactatgtagaggtagacagagttctggaggtgtcgtat
tgtgaagacaaagacacgagagaggaggtggtgtactacttggtgaagtggtgctctctg
ccttatgaggacagcacctgggagttgaaggacgacgttgatcagagcaagattgaagag
tttgagcagctgcaggcagccaagccagactcgcgcagggtggagcggcctccagccaat
ctgtggaagaagagagagcagtcaaggaaatacaggaatggcaacagcctcagggactac
cagctagagggagtcaactggcttctcttcaattggtacaacagacggaactgcatccta
gcagacgagatgggcctgggaaagaccatccagtccatcacattcctagaggagatctat
cgtgtgggcatcaaggggccattcctcattattgctccgctctccaccattgccaactgg
gagcgtgagttccgtacttggacccacctcaatgtaatcgtctaccatggaagcatggtc
agcaggcagatgctccagcagtatgagatgtatttcagggatgcacagggccgtgtgatg
cgaggtgcctacaggttccaggctgttatcaccacgtttgagatgatcctgggaggctgc
cccgaactcaacgccatagagtggcgctgtgttatcatcgatgaagcccaccgcctcaag
aacaagaactgcaagctgctggagggcttcaagctcatgagcctggagcacaaggtcctg
ctgacgggcactcctctccagaacacagtggaggagctcttcagcctgctccactttctg
gagcctgcacgcttcccctcagaaaacaccttcatgcaggagtttggagacctcaagact
gaagagcaggtgcagaagcttcagggtatcctgaagcccatgatgctgcgccggttgaag
gaggatgtggagaagaagttggctcctaaagaggaaaccattatcgaggttgagctcaca
aatattcagaagaaatactaccgcgccatcctagagaaaaacttctctttcctggctaaa
ggagctggccaagcaaatatgcccaatctggtcaacaccatgatggagctgagaaagtgc
tgcaaccacccctacctcatcaaaggggcagaagacaagatcctagaggacttcagggaa
gtatatagccccactgccatcgactttcacctgcaggccatggtgcagtctgccgggaag
ctggtccttattgacaaactgctgcctaagatgaaggctggagggcacaaggtcctcatc
ttctcccagatggtgcgctgcctggacatcttggaagactacctcattcagagaaggtac
ttgtatgagcggatagatggacgtgttcgtgggaatctgcgacaggccgccatcgaccgc
ttcagtaagcccgactcggaccgcttcgttttccttctgtgtacaagagcgggtggcctg
ggaatcaacctcacagcagcagacacctgcatcatctttgactctgactggaacccacag
aacgacctgcaggcccaggctcgctgccaccggatcggtcagaacaaggcagtgaaggtg
taccgtctgatcaccaggaactcgtacgagcgggaaatgtttgatcgcgccagtctcaag
ctgggccttgacaaagcagtgttgcagagcatgagcggccgagataacagcctgggagga
ggcgccgggggaggggcagtgcagcagcagctgtctaaaaaggagattgaggatctgttg
cgacgtggtgcttacggggccatcatggatgaggaggatgaaggggccaaattctgtgag
gaggacatcgaccagatcctccaacgcaggacaaagaccatcaccattgaatctgaggga
cgaggatccacctttgctaaggccagttttgtggcatccggaaaccgcacggacattgct
ctggatgaccccaacttctgggacaagtgggccaaaaaggctgacattgatatggatatg
gtcaatggcagaaacagtttggtgatcgacacccctcgtgtcagaaaacagacgaggccg
ttcagcgccaccaaggatgagctggcagagctttcagagggcgagagcgacagtgacgac
actaaacctaagctcaggcgaaaccacgaccgcctcaacagctacggacgcacagagtgc
ttcagagtagagaagaacctgcttgtatatgggtggggtcgttggaaggatatcctcaac
catgggcgttttaagaagcagctaacagagtgggatgtagagtcaatctgcagggcactg
ctggcctactgcctggtccattaccgtggagatgacaaaatcaaaagcttcatgtgggac
ctgattgccccttctgaggatggacgcaccaaggagctacagaatcacctcggtttgtct
gcccccgtccctcggggtagaaagggtaagaagatgaagacacagtccagctcttttgac
atccacaaagctgagtggctcaggaaacacaacccagagcacatgcttcaggacgacggc
tacaagaaacacctcaaacaccactgcaacaaggtgctgctcagggtcagaatgctgtac
tacctgaaacaagaggtgataggaaaccaggcccagaaagtgctagacggctcggactcc
agtgagataaagatttgggtgccagagcctgaccattcagagctgccagccttgtggtgg
gatgccatctccgacaagtgtctactgctaggtgtatataagcatggttatgagaagtac
aacactattcgtgcagaccctaccctgtgcttcctagaccgtgtggggcgaccggatgag
aaggccattgctgccgaacagagaggcaatgattttatggatggggatgtggatgatcca
gaatacaagcctgctccagccctgctgaaggacgatatggaggatgatgcctcctctcct
ggagacttggttgtcactgacaacgctggagatgcagttccagtgacagaaggtgaaact
gcctactggccctcctcctccgtgttgacagccaggctgagacgtctgatcacagcctcc
cagcgctacaccaaaagccggcagatcctccacatccaccaggctcagtctcagtcccag
cagaccatgatactgtctgctccactctgcccgctgccccccacactcaaagacaccctt
aaccccaagatggctgcaaagattgaacgccagcaaagatggaccagacgagaagaagct
gacttctaccgggtggtctccacttttggtgttgtttttgacccaaaccttggccgcttc
gactggaccaagttcagggccatggctcggctgcacaagaagactgacgagagcctgcag
aaatacctgtgtgctttcaccgccatgtgccgacgggtgtgccgcctgccacccaaagag
ggagactctgcagtggacccgtctctgaacattcagcccattacagaggagcgagcatct
cgtaccctctacagagtagagctgcttcgccaggtgagggaacaagtccttcgacattcg
ttactctatgagcgcctctcgctttgccagatgagctctgacttacccgtctggtgggaa
gctggtacccatgaccgtgacctgctaattggtgctgccaagcacggcgtcagccgcaca
gattaccacattctgagagacccagagctcagcttcatggctgcccaccgcaactacagc
caaacaaaagctgctcagcagcaatcacgcacatccaccccacacctacaacctcagcac
caggccaccagctctgtgttgacaggctctccgctgcctctggcggcccagagagagaca
gagccctgtggggttgtgcccaaagtggaaccaacctcagagggggaagagagcagggag
aaagggggcgagagctggagcccccctcgagtgccagctactccaacaggtctggaagag
aagcccgtttctgagacgagggacaatgagaggcagatggtggcagcacgaactaaaccc
ctcacacccaactcctcagagaggaaacccaagaaggccagcaagaggggccgcagggag
gccaggcgtggctcagagtctaactcagatggctcctcctcaagctcctcttcgcgctcc
tcctcttcttcgtcatcttcctcttcttcctcctcacattctgggtccagctcctcctcc
tcttcttcgtcttgctcctctgggtcttcatcatcatcatcctcctcctcctcatcttct
gaagacagcgaaagtgagggagaggaagggaagaagaaagtccctgcagcaacaagtgtg
aagggctttgatgaagacagtgtggcatctctgagcactacacaggatgaaacacaagac
acccatgtggctgagaatggcatcaccaacagcacctcgcatcctctccagggaggagga
tacatgcttgctgcttcctactggccaaaggatcgcgtgattatcaaccgcctggacagc
atctgccaggcagtgctaaagggcaagtggccaggaacacgtcgggtctacgagcctgga
ggtgcagtggcctccttctacaccaccaagctgctggacagcgccaacagcctgtgcgag
gacccctctgcctcgccacaggggtcaaaggtgaccaagcatgttgcagaaaacaaggag
ttctcagtaaaactcaacgatcaggagggaggtctgaagttgaccttccagaaacagggt
ctacctctgaagaggcccctagagtctgaggagggcccccaggcccagcagcaataccta
gcccggcttcatgagctgcagagcgcctcggacacaggcctggctgatatcaccaagcct
cagtgcagcttccagactggtctgactggacagatgaggttgaatggagtactggacggc
caaccggtggttaagaagcgaaggggaaggaggaagaacgtagaggggatggacctgctc
ttcatgaacaggggtagagcccctgctgttcccgatcaggtgcctccagggtggggtggt
attggccaggtgggcatggctgtggcccctgcaccaggctacagccagagctccagtcag
gtgcctgcggacacagaaagcagggtccccgtcatcaacctcaaagatggcacccggctt
gctggggacgacgctcccaggaggaaagatctagaacagtggctaaaagagcaccccggc
ttcgtcgcagacacaggagcctttattcctggggtaaataagatgcaaatgcagttccac
ttccaggacggtcggcccaagcagaagaggcaccgctgtaggaacccaaacaagatcgat
gtcaacagcctgacaggagaggaaagggtccaaatcatcaacaggagaaatgcacgcaag
gtcggcggggcctttgctcctcctctgaaggatctgtgccggttccttcaggagaacccc
gagtacggagtcccacctgaatgggcggatgtggtcaaacagtcgggttacctcccagag
agtatgtttgacaggatcctgacaggacccattgttcccgaggaggtgagccggcgtgga
cgtcgacccaagaatcctctggccaaggcggcggcggcggcggcagcagcagcgcccaac
acagcagcctctgccctcggtctgaaccccctgctggccaacggccttctctctggaatg
gacctcaccagcctgcaggccttccagcaaaaccttcagagcttacagtccctgcagctc
accgcgggcctgatggcgctgccgtccgacgctagcaacctggctgcgagcaacttagct
gccatgtttcccatgatgctgtctggcatggctggattgccaaacctgcttggcatgagc
agcttgcttgggaagcctgctcaggagggcgcaggaggctccgaggaaaagacaaaggga
accgccagcggcgcaacaggagagccgtctgcctctgaagccccttctcacacctcagac
accaaaggagaaaggacagagggcttgaacacgactccttcctcaacttccagctcctct
tcctctgctaccgccccacaaagtgcttcagctgcctctgcagcctccagtcacccactg
tccctgaaccccttgttactctccagtatgctttacccagggatgcttctcactccaggc
cttaaccttcctgtgtctgccgcacagccgcagagctcaaacagtgaccccacccttgct
cctgctcctcatcctcctctgcctgcagcctccaagtcgttgccacaggagacggagcgg
ccggcggcagagaaggacggagaggaggaggaagaggcgttggacgaggctttggacgag
gctttggacgaagaagaggaggaggagtcggcagaacaaaaagagaacagtggtcctgaa
ggttcaaggaaagccgagtcatcttcatcagagtctgggagctcttcctcatcctcagac
gattcagactccagtgatgaggactga
DBGET
integrated database retrieval system
