Xiphias gladius (swordfish): 120793101
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Entry
120793101 CDS
T07311
Symbol
nedd1
Name
(RefSeq) protein NEDD1 isoform X1
KO
K16547
protein NEDD1
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xgl03036
]
120793101 (nedd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xgl04812
]
120793101 (nedd1)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
120793101 (nedd1)
Microtubules and associated factors
gamma-tubulin ring complex
120793101 (nedd1)
Cytoskeleton proteins [BR:
xgl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
120793101 (nedd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_RFWD3
EIF3I
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
Beta-prop_LRRK2
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_VPS8
Cytochrom_D1
PQQ_3
KNTC1_N
PQQ_2
Motif
Other DBs
NCBI-GeneID:
120793101
NCBI-ProteinID:
XP_039988725
LinkDB
All DBs
Position
LG8:30635527..30648250
Genome browser
AA seq
678 aa
AA seq
DB search
MEEVTRLVSTGDCVKIWDAVSMAPLEQFNPHSISHPVAQACWSSNNHYLVSASSSGDKLV
VSSLKSTPVPVVELAEGKKQTRVCLSSSSQFLVSGGLDHCVHIWDLKTKRLHRSLKDHKE
EVTCVSFNANDSYIASGSSSGDLVLHSLTTNLSSKAFGHGSNQPIHDLRLSMLKRSLLGS
VSDSGTVVLWDSNTQKELHVFDGAHKAPGSGLAFSPASELLVVSVGLDKKIVCYDTASKI
VLKSIRVDSPLTSVDFTLDGTGLVVGSTQGKIYQYDLRNSSAPTRITVAHKTSVTCLRLQ
SHPSRLKSIKPASTKLASSKRSSTKVSSNQPDPAPSTGPAPHRQVTGTGGAGAEVMSREA
EGQQGTEQPPAAEKFSGVGRNSLDVFSPAREALPSVPDSRTQGTTGDTPFGRTHVTSLEK
LSREGEGQQVIGRASLDVFSPVREDSHSGANYHRKTPVGTPLGTPLVATAGRCYSPLSFI
QTPPPIKEEEPIVAAAAEPCDSRKSDKASSSSLEGEGQTTPTSSQQTNHSQPAPPFFTPE
PSLRRANGVHAQLSYDSPVLGAPPAAAAVPSVSSGPALSSAVSSSLSQNIAEVVGQGGAA
PLTSLQIHFIQNMIHETLEDFRDACHRDVVNLQVEMVRQFYIQLNEIHGLIEKYSVNESL
VEEIEKLREENRRLRTNY
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtgacccgcttggtgtcgacaggggactgcgtgaagatctgggatgcggtt
tccatggcgccactggagcagtttaacccacacagcatcagccaccctgtcgcacaggcc
tgctggagctccaacaaccattacctggtcagtgccagcagcagcggggacaaactggtg
gtttccagtctcaagtcgactccagttccagtggtggaactggccgaggggaaaaagcag
acacgtgtgtgtctgagttcatcgtctcagtttctggtcagtggaggtctggatcactgt
gttcacatttgggacctgaagaccaagagactgcaccgctccctcaaggaccataaagaa
gaggtgacctgcgtgtccttcaatgccaacgacagctacatcgcctccggatcctccagt
ggagatctggtcctccacagtctgaccaccaacctgtccagcaaagctttcggccacggc
agcaaccagcccatccacgacctgaggctgtccatgctgaagcgctccctgctgggcagt
gtgtctgacagtggcactgtggtcctgtgggactccaacacccagaaggagctccatgtt
tttgacggtgcccataaggccccgggctccggcctggccttctcccctgccagtgagctg
ctggtggtcagcgtcggtctggacaagaagatcgtctgctatgacaccgccagcaagatt
gtcctgaagtccatccgggtggacagtcctctgacctcggtggactttactctggacggt
accggtctggtggtcggatccactcagggtaagatctaccagtacgacctgaggaactcc
agcgcccccaccaggatcacggtggcacataaaacctcagtgacctgccttcgcctccag
agccaccccagcagactcaagtccattaaaccggcctccaccaagctcgccagttctaaa
aggtcttcaaccaaagtgtccagcaaccagccagaccccgcccctagcacaggccccgcc
ccccacagacaggtgacgggcacagggggcgccggtgcagaggtgatgtcccgggaggcc
gagggtcaacaggggacagagcagcctcctgctgcggagaagttcagcggcgttggacga
aacagtctggatgtcttctctcctgcacgggaagctcttccctctgtcccagactcgagg
acacaggggacgactggagacacaccgtttggaagaacacacgttaccagtttggagaag
ttatccagagaaggggagggtcagcaggtcatcggtcgggccagtctggacgtcttctcc
cctgtcagagaggactctcattcaggtgccaactaccatcgtaagacccccgtgggaacc
cccctgggaacccccctggtagccactgccggtcgatgctacagcccgctgtccttcatc
cagacccccccaccaatcaaagaagaagagcccatcgtcgctgcagccgctgagccgtgt
gactccaggaagtctgacaaggccagcagctccagcctggagggggaggggcagaccaca
cccacatcgtcccagcagaccaatcacagccagccggccccgcccttcttcactccagag
cccagcctccggagagccaatggtgttcatgctcagctgagctacgactcacctgtcctc
ggagctccgcccgctgcagcggcagttccgtccgtgtcttcaggtccagcgctgtcgtcg
gcggtgtcctcctctctctcccagaacatcgcggaggtggtcggacagggtggagctgct
cctctcacctccctgcagatccacttcatccagaacatgatccatgaaaccctggaggac
ttcagggacgcctgtcaccgagacgtcgtcaacctccaggtcgagatggtccgacagttt
tacatccagctgaacgagatccacgggctgatagagaaatactctgtgaacgagtctctg
gtggaggagatcgagaagctgagagaggagaaccgcagactgaggaccaactactga
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