Xiphias gladius (swordfish): 120793126
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Entry
120793126 CDS
T07311
Symbol
cftr
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator isoform X1
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl02010
ABC transporters
xgl04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120793126 (cftr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120793126 (cftr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xgl02000
]
120793126 (cftr)
Enzymes [BR:
xgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
120793126 (cftr)
Transporters [BR:
xgl02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
120793126 (cftr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
AAA_21
SMC_N
RsgA_GTPase
DUF87
AAA_29
AAA_16
nSTAND3
MMR_HSR1
T2SSE
AAA_23
FtsK_SpoIIIE
NB-ARC
Dynamin_N
Zeta_toxin
MeaB
nSTAND1
AAA_30
Motif
Other DBs
NCBI-GeneID:
120793126
NCBI-ProteinID:
XP_039988800
LinkDB
All DBs
Position
LG8:27736352..27785946
Genome browser
AA seq
1511 aa
AA seq
DB search
MQKSPVEDANFFSKYFFWWTTPLLRKGFRKKLELTDVYKAPSFDLADNLSERLEREWDRE
VVSAKNKPRLMRALARCFFGPFAFFGVLLYLGEASKTVQPQLLGRIIASFDPFHAPERGQ
GYFLALGLSLLFTARFLLLQPAIFGLHHLGMQIRIALFSLIYKKTLKLSSRVLDKISTGQ
LVSLMSAHLNKLDESLGLAHFVWITPLQCILCVGLIWELIEVNSFCALAALTLLGIIQAW
LSQKMGPHRVKRAGMISRRLALTSEIVENIHSVKAYGWEEVMETIIKNIRQDEMTLTRKI
GSLRYFYSASYFFSAILVIVSAIVPHALSKGIILRRIFTTASYCMVLRMTLTRQLPGSIQ
MWYDTLALVTKIEEFLMKEEYRVLEYNLTTTELELVNVSASWDEGIGELFEKIKQESKAN
GHPNGDAGLFFTNLYVTPVLRNISLYLERGKMLAVAGSTGSGKSSLLMMILGELVPTEGK
IRHSGRISFSPQTSWIMQGTIRDNILFGLTYDEYRYTSVIKACQLEEDFALLPEKDKTLL
IEGGVTLSGGQRARLGLARAVYKDADLYLLDAPFTHLDIVTEKEIFEKCVCKLMASKTRI
VVTSKLEHLKRADKILLLHNGDCYFYGTFSELQAQRPNFSSLLLGLEAYDNMNAERRSSI
LTETLRRVSIDETASFRGPEPIRQSFRQPPPPIIVSGSQGHPVGDGYPEKRKQSLILSPL
AAARKFSLIGNTQQTNTPQSTTIEDGVHELSERKFSVVPEDDQVEEVLPRGNLYHHGLHH
LNGQRRQSVLAFITSAQGQERREQVQSSFRRKLSITPQCDVASELDIYARRLSKDSVYDI
SEEVDEEDMEQCFADERENIFETTSWSTYLRYVTTNKSLVYVLIFIVFVFVIEVAGSVIG
IFLITDTIWRDGANPSAPNYISEQHPNASSPPVHLAVIVTPTSAYYIIYIYVATSESMLA
LGFFRGLPLVHTLLTVSKRLHEQMLTAVLRAPMAVLNTMKTGRIMNRFTKDMATIDDMLP
LVLFDLIQLTLIVTGAIFTVSIMRPYIFIAAIPLAVIFAILRKYFLRTGQQLKLLEAEAR
SPIFSHLIISLKGLWTIRAFGRQTYFEMLFHKALNTHTATWFHYLATLRWFLFRCDIIYV
LFFSAAAFIAVGTNQDKPGEIGIIVALAMLILGTFQWAVITSITVDGLMRSVDRVFKFID
LPSEEPLLGKSGGKGGPDLVIDNPHAHDCWPNRGQMDVRGLTVKYTEAGRAVLSDISFSL
EGGQSVGLLGRTGSGKSTLLSALLRLASTDGEISIDGVSWSSVSLQTWRKAFGVVPQRVF
ILTGTFRMNLDPHGRYSDEELWRVAEEVGLKSVIEQFPDKLDFQLEDRGNVLSNGHKQLL
CLARSILSKARILLLDEPSAYLDPITLQVLRKTLKQAFSGCTVILSEHRVEPLLECQSFL
MIEGSSMKSYDSIQKLLNETSHMKQAMSAADRLRLFPTLHRLNSSKRAAPQTAKISSLPE
EAEDEVHDTRL
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagtcacctgtggaagatgcgaacttcttctccaagtatttcttctggtggacg
acaccgctgctgaggaagggcttcagaaagaagttggagctgacagatgtctacaaggct
ccttcgtttgatctggcggacaacctctccgagagactcgaaagagaatgggacagagag
gtggtgtcagccaagaacaagcccaggctgatgcgagcgctggcccgctgcttcttcggc
ccttttgccttcttcggtgtcctcctctatctcggggaggcttccaagacagtgcagcct
cagcttttgggtcgtatcatcgcctcctttgacccgttccacgctccagagcggggccag
ggatacttcctggccctgggcctctccctcctcttcaccgcccgcttcctcctgctgcag
cctgccatctttggcctgcatcacctgggcatgcagatccgcatcgccctcttcagcctc
atatacaagaagaccctgaagttatccagccgagtcttggataagatcagcactggtcag
ctggtcagtctgatgtccgcccacctcaacaagctagatgagagcctgggtctggcccac
tttgtatggatcacccccttgcagtgcatactgtgtgtgggtctgatatgggaactgatc
gaggtgaacagcttctgcgccctggcagctctgaccctgctgggcatcatccaggcctgg
ctctcacagaagatgggacctcaccgggtgaagcgagccgggatgatcagccgccgcctg
gctctcacctcggagattgtggagaacatccactctgtgaaggcgtatggatgggaggag
gtgatggagaccatcatcaagaatatcaggcaggacgaaatgacactgacgaggaagatc
ggttctctgcgttacttctacagcgcctcctacttcttctccgccatcctggttatcgtg
tcagccattgtgcctcacgcactcagtaaaggcatcatcctgcgtcgaatcttcaccaca
gcctcctactgcatggttctgaggatgacgctgacccgccagctgccaggatccatccag
atgtggtacgacacgctggcattggtcacgaagatagaggaattcttgatgaaggaagaa
tacagagtgctggagtacaatctgaccactacggaactggaactggtcaatgtgtctgca
tcctgggatgagggcatcggtgagctgtttgagaagatcaagcaggagagcaaagcaaat
ggacaccccaacggtgacgccggcctcttcttcaccaacctctatgtcacacctgtcctc
agaaacatcagcttgtacctggaaaggggcaagatgctggcggtggctgggtccactggc
tcggggaagagttccctgctcatgatgatccttggagagttggtgccgacagagggtaaa
atcagacacagcggtcgcatctccttctcaccacagacttcctggatcatgcaggggacg
atccgtgacaacatcctgtttggcctgacctatgacgagtaccggtacacctccgtgatc
aaggcctgtcagctggaagaggactttgccctgctgcccgaaaaagacaagacgctcctc
atcgaaggaggagtgaccctcagcggcggtcaaagggctcgcctcggcctggccagagct
gtgtataaagatgccgacctctacctgttggatgcaccttttacccacctggacatcgtg
acagagaaagagatctttgagaaatgtgtctgtaaacttatggcctccaagactcgtatt
gtggtcaccagcaagttggagcatctcaaacgagcagacaaaatccttctgctgcacaat
ggtgactgctacttctacggcaccttctcagagctgcaggcccagcgccccaacttcagc
tccctcctcctcggccttgaagcttatgacaacatgaacgcagagcgacgcagctccatt
ctcacggaaactctccgcagggtctccattgatgaaaccgccagcttccgaggaccagag
ccaattcgacagtcgttccgccagccgccgcctccaataatcgtttctggatctcaaggc
catcctgtaggggatggctacccagaaaaacgcaaacagtcactcatccttagtcccctg
gcagccgcccgcaagttctccttaattggaaacacccagcagacaaatacaccccagtcc
acgacgatagaggatggggttcatgaactttcagagagaaaattctctgtagttcccgag
gatgatcaagtagaggaggtgctccccaggggtaacctgtaccaccatgggttgcaccat
ctcaacgggcagaggcgccagtccgtcctggcattcatcaccagtgctcagggccaagag
cggagagagcaggtgcagtcatccttcagaagaaagctgtccatcaccccgcagtgcgac
gtggcatctgagttggacatttacgcccgccgcttatccaaggacagtgtttatgacatt
agtgaggaggtggatgaagaagacatggagcaatgcttcgcagatgaacgtgagaacatc
tttgaaactacctcatggagcacttacctacgctacgtcaccacaaataagagcttagtc
tacgtcctcattttcatcgtctttgtcttcgtcatagaggttgctggttcagtcattggc
attttcctcattactgacaccatctggagggacggcgccaacccttcagcacccaactac
atcagtgagcagcaccccaacgcctcgtcgccccccgtccacctggcagtcatcgtcaca
ccgaccagtgcttactacatcatctatatctacgtggccacatcggagagcatgctggcc
ttggggttcttcaggggtctcccattagtgcacacattgctcactgtgtccaaaagactg
catgaacagatgcttaccgctgtgctacgagcccccatggctgtgctcaacacaatgaag
acaggccggatcatgaacagattcaccaaggacatggccaccatagatgacatgctgcct
ctggttctgtttgacctcatacagctgacattgattgttaccggtgccatcttcactgtg
tccatcatgcggccgtacatcttcattgctgccatcccactggctgtcatctttgctatc
ctgaggaagtacttcctgcgaactggacagcaactcaaactgctggaggccgaagctcgt
agccccatcttctcccacctcatcatctcacttaaaggtttatggacaatacgagcgttt
gggcgtcagacctacttcgaaatgctcttccacaaggcgctgaacactcacacagccacc
tggttccactacctggcaacactgcgatggttccttttccgctgcgacattatctacgtc
ctgtttttcagtgctgctgccttcatcgccgtgggaactaaccaagacaaaccaggggag
atcggcatcatcgtggccctggccatgctcatcctggggactttccaatgggctgtcatc
accagcatcactgttgacggactgatgcgatcggtggatcgggtgttcaaattcatcgac
ctgccatccgaggagccgctgctggggaaatctggtggtaaaggaggccccgacctcgtc
atcgacaaccctcacgctcatgactgctggcccaaccgcggccagatggatgtccggggc
ctcaccgtcaaatacacagaggctggacgcgccgtcctcagcgacatctccttctctttg
gaggggggccagagtgtgggtctgctgggtcgaacaggctcagggaagagcacgctgctg
tccgccctgctgcgcctcgcctccacggatggagaaatctctattgacggtgtctcctgg
agctccgtctccctgcaaacctggaggaaggccttcggagtggtgccccagagagtcttt
attctgactggaactttccggatgaatctggacccacacggacgttacagcgatgaggag
ctgtggagggtggccgaggaggtgggtctgaagtcagtgatcgagcagtttccagacaag
ctggactttcagctggaggacagaggcaacgtgctgagcaacggacacaaacagctgctg
tgtctcgcacgttccatcctcagcaaggcccgcatcctgctgctggacgaaccctccgcc
tacctcgaccccataacgctacaggtcctgaggaagacgctgaagcaggcgttctccggc
tgcactgtcatcctatcagaacacagagtagagccgctgctcgagtgtcaatcattcctg
atgatcgagggcagctccatgaaaagctacgactccatccagaagctcctgaacgagacg
agtcacatgaaacaggccatgagcgccgccgaccggctccgcctcttcccgacgcttcac
cgcctcaactccagcaagagggcggcgccgcagaccgccaagatctcgtccctgccagag
gaagctgaggacgaggtccacgacactcgtctctaa
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integrated database retrieval system
