Xiphias gladius (swordfish): 120793183
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Entry
120793183 CDS
T07311
Symbol
roraa
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120793183 (roraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xgl03310
]
120793183 (roraa)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120793183 (roraa)
Nuclear receptors [BR:
xgl03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
120793183 (roraa)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120793183
NCBI-ProteinID:
XP_039988926
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Position
LG8:17669299..17853298
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AA seq
519 aa
AA seq
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MESPPDPASDPGNSASEPATPVRETPVNLETLRKADHPAPVRRQTCSSTNRGISVTKKTH
TSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRNR
CQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQPGEAEPLTP
SYGLSANGLTELHDDLSGYMDGHTPDGSKPDSAVSSFYLDIQPSPDQSGLDINGIKPEPI
CDFAPGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQAFL
QEEVESYQNKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVV
FVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSIFEFGKNLCSMHLSEDEIALFS
AFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCSRH
TEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVDG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccctccagatccagcgagcgacccgggcaacagcgcctcggagccggctacc
ccggtcagggaaaccccggtaaacctggagacgctccggaaagcggaccatccagccccg
gttcgaaggcagacctgctccagcaccaaccgaggtatctcagtaacaaagaagacacat
acctctcaaatcgaaataattccctgcaagatctgtggagacaaatcatcaggcatccat
tatggcgtgataacatgtgaaggctgtaagggcttcttcaggaggagtcagcagagcaat
gcagcctactcctgcccccgtcagaagaactgcctgatcgaccgcaccagccgcaaccgc
tgccagcactgccggctgcagaagtgcctggcagtgggcatgtcacgagatgcggtgaag
tttggccgcatgtcgaagaagcagcgagacagcctgtatgctgaggtccagaagcaccgg
ctgcagcagcaacagcgcgaccaccaacaacagcctggagaggcggagccactcacgcct
agctatggcctctcagccaatggcctcacagagctccatgacgacctcagcggctacatg
gatggtcacacccctgatggcagcaaaccagactctgcagtcagcagcttctacctggac
atccagccatctcctgaccagtcaggcctggacatcaacggcatcaagccggagcccatc
tgcgactttgccccgggctctggcttcttcccttactgctccttcaccaatggagaaacc
tcccccaccgtgtccatggctgaactagagcacctggcccagaacatctccaagtcacac
atggagacatgtcagtacctgagggaggagctgcagcagatgacctggcaggccttcctg
caggaagaggtggagagctaccagaacaagccccgggaagtcatgtggcagctgtgtgct
atcaaaataacagaggccattcagtatgtggtggagttcgccaagcgcatcgacggcttc
atggagctgtgtcagaacgatcagatagtgctgctgaaagcaggctctttggaagttgtg
tttgtcagaatgtgccgtgcctttgactcgcaaaacaacacagtctattttgatggaaaa
tatgccggaccggatgtgttcaagtcattaggctgtgacgacttgatcagctccatcttc
gagtttgggaaaaacttgtgttctatgcacctgtctgaggatgagatcgccctgttctct
gcctttgtgttgatgtctgctgaccggtcctggctccaggagaaggtgaaggtggagaaa
ctccagcagaagatccagctggcccttcaacacgtcctgcagaagaaccacagagaggat
ggtatacttacaaagttgatatgcaaagtgtcgacactgcgagcactgtgcagtaggcat
acagagaagcttacagctttcaaagcaatatacccagacattgtgcgtgcccacttcccc
cccttatacaaggagctgttcggatcagactttgagcagtccatgcccgttgacgggtag
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