Xiphias gladius (swordfish): 120793226
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Entry
120793226 CDS
T07311
Symbol
amfra
Name
(RefSeq) autocrine motility factor receptor a
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04137
Mitophagy - animal
xgl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120793226 (amfra)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120793226 (amfra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120793226 (amfra)
Enzymes [BR:
xgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
120793226 (amfra)
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120793226 (amfra)
Multi subunit type E3
ERAD complex
120793226 (amfra)
LMBR1L-GP78-UBAC2 complex
120793226 (amfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
G2BR
zf-C3HC4_2
CUE
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-RING_11
zf-RING_16
zf-RING_5
zf-C3HC4_4
zf_RING_Vps8
Prok-RING_4
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
120793226
NCBI-ProteinID:
XP_039989030
LinkDB
All DBs
Position
LG8:29856558..29873123
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AA seq
627 aa
AA seq
DB search
MPFLFLERFPWPSLQTYAALSAALLAGTVLTACSSDSRPQSSPEEVHSSRISRCITDGGQ
YLRAGYGDVAADVLLYLLTDSVFVWVMVNTACCVLLLIAKLIQCVVFGPLRVSEKQQLKD
KFWNFIFYKFIFVFGVLNVQTVEEVVMWWLWFAVLVFLHLLVQLCKDRFEYLSFSPATPL
SSHARVLLLLVVLLLCCGGLATLCSRVARSQGRHTAAFMAAECMLVTVKTTHVVFRYSIH
LWDVNQEGSWENKSSCVYYTDLLMVLLLLGLDLLHHIHMLLFSNIWLSMASLVIFMQLRF
LVQEVQKRIRRHHNYLRVLRNMETRFSVASADELAANNDDCAICWDVMSSARKLPCGHLF
HSSCLRSWLEQDTSCPTCRMSLNIDEGGEGRVERETREAVPVNMAAGPGTDVPPHLNQLN
HFFHFDGSRIASWLPSFSVEVMATTNFLGIAPTNPSQINTMAQQIQEMFPQVPLQLILQD
LEITQSLEVTSDNILEGRVQTAAPPLAMEHPLIQVTPPPEDEREASSESEQEDEEEDEDV
VERRIAVEDKKDEDEQKVEVRFCTSAEERQKLLLQRKEELLQRARRDYLTRNTRSDTGNP
DGSDLRSREPAKRSVSGGGGTTATETY
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcttgttcctggagcggttcccctggcccagtctacagacctacgcggcgctg
agtgctgccctgctggccgggaccgtcctgaccgcctgctcctccgactcccgcccacag
tccagcccggaggaggtccacagctccaggatcagccgctgcatcacggacggcggacag
tacctgagggcagggtatggagatgtggctgcagacgtcctgctgtacctgttgaccgac
agtgtctttgtttgggtgatggtaaacacagcctgctgtgtcttgctgctgattgccaaa
ctcatccagtgcgttgtgttcgggccgctccgtgtcagcgagaaacagcaactgaaggac
aagttctggaactttatcttctacaagttcatcttcgtgtttggcgtcctgaacgtccag
acggtggaggaggtggtgatgtggtggctctggttcgcagtcctggtcttcctccatctc
ctggttcagctctgcaaggaccgctttgaatatctgtccttctctccggccactcctctg
tccagccacgcgcgggtgctgctgctgttggtggtgctgctgttgtgctgcgggggtctg
gctacactttgcagccgggtggcacgcagtcagggccgccacaccgccgcattcatggct
gcagagtgtatgctggtgactgtcaagaccacacacgtcgtgtttcggtactccattcac
ctgtgggacgtgaaccaggagggcagctgggagaataaatcctcctgcgtttactacacc
gacctcctgatggtgctgctgttactgggcctcgacctgctgcatcacatccacatgctg
ctcttcagtaacatctggttgtccatggcgagtctggtcatcttcatgcagcttcgtttc
ctcgttcaggaggttcagaagagaatccgccgccaccacaactacctgcgagtgctccgc
aacatggagacccggttttctgtggcgtctgcagacgaactggcagccaataacgatgac
tgtgcgatctgctgggacgtgatgagttcagctcggaaactgccctgtggtcacctcttc
cacagctcgtgtctgcgctcctggctcgagcaggacacgtcatgtccaacatgtcggatg
tccctcaacatcgacgaaggaggtgaaggtcgcgtggagagggagaccagggaggccgtc
cccgtcaacatggctgccggacctggaaccgacgttccgccgcacctcaaccagcttaac
cacttcttccactttgatggttctcgtattgccagctggctgcccagtttctcggtggag
gtcatggccaccaccaacttcctgggcatcgcaccaactaacccgtctcagatcaacacc
atggctcagcagatccaggagatgtttcctcaggttcctctccagctgatcctgcaggac
ctggagatcactcagtccctggaggtcaccagcgacaacatcctggagggacgagtccag
accgccgccccaccactggccatggagcacccgctcatacaggtgactcctccacccgag
gacgagcgcgaagccagcagcgagtcagagcaggaggacgaggaagaggacgaagatgtg
gtggagaggcggattgctgtggaggacaagaaggatgaagatgagcagaaggtggaggtt
cggttttgtacgtcggcggaggaacgacagaagctgctgctgcagaggaaggaggagctg
ctgcagcgagcacgcagggactatctgaccaggaacaccaggtccgacacaggaaacccg
gacggctcggacctccgatcccgtgaacctgcgaagagaagcgttagcggcggcggcgga
acgacggcgacagagacgtactga
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