Xiphias gladius (swordfish): 120793314
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Entry
120793314 CDS
T07311
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04115
p53 signaling pathway
xgl04120
Ubiquitin mediated proteolysis
xgl04137
Mitophagy - animal
xgl04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120793314 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120793314 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120793314 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
120793314 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120793314 (siah1)
Enzymes [BR:
xgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120793314 (siah1)
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
120793314 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
120793314
NCBI-ProteinID:
XP_039989206
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All DBs
Position
LG8:complement(7171310..7200750)
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AA seq
312 aa
AA seq
DB search
MSFYKNFISVKQCNRFCLKLYHNTSLLLPEMSRQTATALPTGTSKCPPSQRVPTLSGTTA
SNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKV
ANSVLFPCKYASSGCEVTLPHTDKTEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMH
QHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQ
LIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAEN
GNLGINVTISMC
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttacaaaaactttatatctgtgaaacagtgcaataggttctgcttaaaactt
tatcacaatacctccctcttgttaccagaaatgagtcgccagactgccaccgcgctgccc
acaggaacctccaaatgccccccctcccaacgcgtgcccaccctgtcaggcaccacagcc
tccaacagtgacctggccagcctgtttgagtgccctgtctgcttcgactatgtcctaccc
ccaatcctgcagtgtcagtccggacacctggtatgctccaactgccggcccaagctcacc
tgctgccccacctgccgaggccctctgggctccatcaggaacctggccatggagaaggtg
gccaactctgtcctcttcccctgcaagtacgcctcttcgggctgcgaagtcaccctgcct
cacaccgacaagacggagcatgaagagctgtgcgagtttcggccgtactcctgcccctgc
cctggtgcctcctgcaagtggcagggctccttggacgctgtcatgcctcacctgatgcac
cagcataagtccattaccacattgcagggggaagacattgtgttcctggccacggacatc
aacctgcctggcgcagtggactgggtaatgatgcagtcctgcttcggcttccacttcatg
ctggtgctggagaagcaggagaagtacgacggccaccagcagttctttgccattgtgcag
ctcatcggtactcgcaagcaggccgagaacttcgcctaccggctggagctcaacgggcac
cggcgccgcctgacctgggaggccacgccacgctcaatccacgagggcatcgccaccgcc
atcatgaacagcgactgcctggtgttcgacacgtccatcgcacagctttttgccgaaaac
ggcaacctcggcatcaacgtcaccatctccatgtgctaa
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integrated database retrieval system
