Xiphias gladius (swordfish): 120793553
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Entry
120793553 CDS
T07311
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03420
Nucleotide excision repair
xgl04115
p53 signaling pathway
xgl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120793553 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
120793553 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
120793553 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120793553 (ddb2)
03400 DNA repair and recombination proteins [BR:
xgl03400
]
120793553 (ddb2)
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120793553 (ddb2)
DNA repair and recombination proteins [BR:
xgl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
120793553 (ddb2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
EIF3I
ANAPC4_WD40
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_TEP1_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
120793553
NCBI-ProteinID:
XP_039989676
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All DBs
Position
LG8:18891103..18897180
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AA seq
493 aa
AA seq
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MKSKPRKSDASDSKAKARKRPAENSAPTLSKKLRDKKDGETSKAGPPPKSAGVQRRGGHG
SILHYIYKSTLGQSLHSQMRQCLQEPFVRSLSSYHFHSASSPFDRRITSLEWHPTHRTTL
AVGSKGGDIYLWDFEVPTNKTFIQGNGAGDFIGGMKFCPMDVSRVYVASGEGTLTMQSFE
GRTPTILSRTQDCGHDHHNVCYWYCCVDVSVSRQMLVTGDNMGQLLLLGLDGQKIFSNKL
HKAKVTHAEFNSRCDWLLATASVDHTVKLWDLRNIKDKKSFLHEMPHERAVNSAFFNPLD
CSKLLTTDQYDQIRVYSSPDWSKPQHIIQHPHRQFQHLTPIKATWHPVYDLIVAGRYPDE
RVCSGDQRTIDIFDSNTAELVCQLHDPTASGIKSINKFNPMGDVIGSGMGVTVLVWDRNE
SLISDRQTVHEDSPTSVDSLRGRRSQQRSSRDRRRPAVDAKLKKKLASLEESETKTKTKT
DCTKQKQVQMRKK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaaacccaggaagtcggacgcgtcggattcaaaggctaaggcgaggaaaaga
cccgcggagaactctgctccaactctttcaaaaaaactacgagacaagaaagatggagaa
acatccaaagcagggcctcctcccaagtctgcgggagtccagaggagaggtgggcatggg
agcatcctgcactacatttacaagagcaccctgggacaaagtcttcactcgcagatgaga
cagtgtctgcaggagccgttcgttcgctctctgtcgtcctatcatttccacagcgcttcc
agccccttcgaccgccgaatcaccagcctggagtggcatcccacccaccgcaccactctg
gctgtggggtccaagggtggagacatttatctgtgggactttgaggtccccacaaataaa
acttttattcaggggaatggtgcgggagacttcattggagggatgaagttttgccccatg
gacgtttcaagagtctatgtggcctctggcgagggcacactgaccatgcagagctttgag
ggccgcacacccaccatactgtccagaacccaagactgtggccatgatcaccacaatgtt
tgttattggtactgctgtgtggatgtgtctgtgagccgacagatgcttgtgacaggagac
aatatgggacagctcttactcctgggcttggatggacaaaagattttcagtaacaagctg
cacaaagccaaagtgacccatgcagagttcaactcccgatgtgattggttgttggcgacg
gcctcagttgaccacacggtgaagctttgggacctgaggaacataaaagacaagaagagc
ttcctgcatgaaatgcctcacgagagagctgtcaactcagccttcttcaacccgctggac
tgctccaagttgctcacaacagatcagtacgaccagatccgcgtctactcgtcccctgat
tggtcgaagcctcaacatatcattcaacatccacacagacagtttcagcatctcacaccc
attaaggccacatggcacccggtatatgacctgattgttgctggccgctaccctgatgaa
cgtgtttgctccggcgatcagaggaccatcgacatctttgattccaacacagcagagctc
gtgtgtcagctgcacgatcccactgcttcggggatcaaatctatcaacaaattcaatccg
atgggtgatgtgattggatccggcatgggtgtgactgtgctagtctgggacaggaacgag
tcattgatcagcgatcggcagacagtgcatgaggacagcccgacctcggtggacagtcta
agagggcggaggagtcagcagcgctccagtagggaccggaggcgtcccgctgtggatgca
aagctcaagaagaaactggcttctctggaagaatctgagaccaaaaccaagaccaagact
gactgtacaaaacaaaaacaagtgcagatgaggaagaagtga
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