Xiphias gladius (swordfish): 120793675
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Entry
120793675 CDS
T07311
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xgl03036
]
120793675 (tdrd12)
Enzymes [BR:
xgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
120793675 (tdrd12)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Gene silencing
piRNA pathway
120793675 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
Helicase_C
CS
Motif
Other DBs
NCBI-GeneID:
120793675
NCBI-ProteinID:
XP_039989880
LinkDB
All DBs
Position
LG8:29762820..29791887
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AA seq
1461 aa
AA seq
DB search
MLKISILKVENPSCLWGRVVRGVGGDTEMTEQYDSLLAQMNLFYRDVAQDLHKLKPTSLE
EGQVCVVYWSVMRSWCRAVVESIIMDSVSCKARCLLVDHGERFVVASDQIRVAVQHFLQL
PFWMRRFHLAGIKPTTLRVSIYKEKAELIPSTQWDSSATLYLHNLLQASTWTEAVLLESE
SDSTSIALYLTLGNIKICVNDDLVAKKFAYYSRESTESSRLDEVDQFPVMLSSSILTQTV
STISNEPTAQTQPPPVISRGLVAGGAGDSLMAPSLPQSQQHEPKTFDGDSRSKITEEQPS
PGSQSRNGSDPAAAESDSSDDTDSSLAAALTKNLSLFKFLKFLNPGSSYQQVARSVSQHE
ELKDCESKETTEASSDCTGQEVSTSLHNSGPVKPVNEELHMSGKSGDSGLDSSEVEYLAV
EDESSSSRSVESGPVDAEKTWRSEEDWACSRLLEWLNPEPLNSDPDAVDDEVPSDPRRSG
ILVHSALPVEPCTSLDDAPITDALRWVLRRKQYSTLSPADRYSWPAVARGCNTVIVSHNS
DQPLSYLAPLLTHIQLNSIFSPLTSSAGPIAVLLCPGWERVQAVYDLLEESKIAQNLHPL
IVLLGVGKDEAKTLRIPKNCLLLVTTPFTLVRLLSCHCFMFLRLYHLVLDGADQLFTLAP
DQMATILQHFQKVTSSEEKASCPQQLVAVAKRWTSHMEALLTNHMPYPCIVMTIPEEAAL
YGNVQQVILMTSESSKISELLGALDFNPDVGQKTLIVANSAQEVEDVFKAVSNKSAFCLK
SHEGFTHQFDDVIQQWRKNIGPGTHVILVTTNNCLKCFGIIDATCVVHYGFPTSPRLFGS
RLFCMSENFRNLSERDQTQSCPRVTRSVLLISERNARHVIGVLRYLGRTSAPLPPELLSF
AKGVRVAREDQKTDRPLCSYLKSLGVCRDSRSCPDRHRFISQLDQSDLPASGVIEVVPLY
IKTASVFYGRIVRKEDRGFDDLASEMASYYADKKPGAKGVLEGGLYAVQEDNVFHRVKIL
SVPERGDSLFFRVFVRFIDVGKEEEVKSYQILQLPEQFHSLPSQALEIIVCRVKPADAEM
DWHPKVNRAISQKVRGLQHRARAVLSLGNTVFVDPMVRVTQVPGMKTVINEYNVQSEILS
TGKGVSNPEHLDLLRALCQESEVSSSKEAGHISGFGGVSVSLEVRIKAEEEVLAEVFRAA
EVRKLADRPQLEPCEPLSPVSSMKQTPVPEPPAPELHLGPVFDQRSPSDIRAANEQRNNH
ISDLQSVEQKTRSRGGGKLCPTTGQAACLHTCDNGFPAGDDQSNSQQVSISTNGTDNDDS
TKSFHPQVRWYQTSDSVIVTVKLINPESQRCDFYQDRVIYSGRVNGRSYRADLELQADIA
ADRCCWEMKSNEPVLKLVKQQHGYWEKLLRNKNIFVSYDMEHIEEEEDRAPNGLWFVEDT
GEDNRMTVPPSTGGGGHRVDR
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaatatcaattctgaaggttgagaacccgtcctgcctctggggccgggttgtt
cggggtgtgggcggcgacacagagatgacagaacagtacgacagtctgctggctcagatg
aacctcttctaccgtgacgtcgctcaggacctgcacaagctgaagcccacatcattagag
gaaggacaggtgtgtgtggtgtactggtcagtgatgaggtcgtggtgtcgggcagtggtg
gagtcgatcatcatggactcggtgtcctgtaaagcccgctgcctcctggtcgaccacgga
gaacggttcgtcgtcgcctcagaccagatccgagtcgctgtacaacacttcctccagctg
cctttttggatgaggaggttccacctggcaggaatcaaaccaacaaccctgcgagtgtct
atttacaaggagaaggcagagcttattccgtccactcagtgggacagctcagctacactc
tacctgcacaaccttctacaagcgtcgacgtggacagaggctgtgttgcttgagtctgag
tcagactccacctccatcgccctctacctgactctcgggaacatcaagatctgtgtgaac
gacgaccttgtcgccaagaagtttgcgtattacagcagagagtcgactgaaagcagcaga
ttggacgaggtggaccaatttcccgtcatgttgtcctccagcatcttaacccaaaccgtc
tccacgatttcaaacgagccgacagcacaaacccaaccacctcctgtgatctcacgaggt
ctggttgcaggcggagcaggtgattcgctgatggcaccctctctacctcagagccaacaa
catgagccgaagacctttgatggagacagcaggtcaaaaatcacagaagaacaaccgtct
ccaggcagccaatcaaggaatggctctgaccctgctgctgcagagagtgactcctcagat
gacacagactcctctctggccgcagctctgaccaaaaacctcagtctgttcaagttcctg
aagtttctgaatcctggcagcagctatcagcaggtggctcgtagtgtcagtcagcacgaa
gagctgaaagactgtgaatctaaagagacgactgaagcctccagcgactgcacaggacag
gaagtatcaaccagtttacacaacagtgggcctgtaaaaccagtgaacgaagagctccat
atgagtggaaaaagtggagattcaggtcttgacagcagtgaggtggaatatcttgcagtt
gaagacgaaagcagctccagtagatcagtagagtcaggaccagtagatgcagagaagaca
tggaggagcgaagaggactgggcctgttcacggcttctagagtggttgaacccggagcct
ctgaactctgatccagacgctgtagacgatgaggttccaagtgatcccaggaggagtggg
attctggtgcactctgccctcccagttgagccctgcaccagcctggatgatgcccccatc
actgatgctctccgctgggtgctgcggaggaagcagtacagcactctgtctccagctgac
cgttacagctggccagccgtggctcgaggatgcaacacagtcatcgtctcccacaactct
gaccagccgctcagctacctcgccccactcctcacccacatccagctcaactccatcttc
agccccctcacctccagcgctgggcccatagcggtgctgctgtgtcctggctgggagagg
gtccaggcggtgtatgacctgctggaggagagcaagatcgcccaaaacctccacccgctc
atcgtgctgctgggtgtagggaaggacgaggccaagactctcaggattccaaaaaactgc
ctgctgttagtgaccactcccttcactctggtccgactgctgtcctgtcactgcttcatg
ttcctgcgtctgtaccacctggtgctggacggggctgaccagctatttactcttgctcca
gaccagatggcgaccatcttgcagcattttcagaaggtgacctccagcgaggagaaggct
tcctgtccccagcaacttgttgctgtggcgaagcgatggaccagtcacatggaggctttg
ttaaccaatcacatgccctacccctgcattgtcatgaccatccctgaagaagctgctctt
tatggtaacgttcagcaggtcatcctgatgacttcagaaagcagtaagatctcagaactg
ttgggcgcgttggatttcaacccagacgtcggccagaagactctgattgtagccaactct
gctcaggaagttgaagacgtgttcaaggccgtgagcaacaaatcagcgttctgcctcaag
agccacgaggggtttacacaccagtttgacgatgtcatccagcagtggaggaaaaacatc
ggccctggcactcatgtaattctggtgaccaccaacaactgtctgaagtgttttgggatc
atagatgcaacttgtgtcgtccactacggcttccccacttctcccagactgtttggcagc
cgactcttctgcatgtctgaaaacttcagaaacctctcagaacgagatcaaacgcagagc
tgccctcgtgtcaccaggtcggtgctgctgatctcagagaggaacgcccgtcacgtcatc
ggggttctgcgttacctgggacgaacaagcgccccactgccccctgagctgctgtccttc
gccaagggtgtccgtgtggcccgggaggaccagaagacagacaggcctctctgcagctac
ctgaagagccttggagtctgcagagacagccgttcatgtcccgaccgtcacagattcatt
tcccagcttgatcagagtgaccttcctgcctctggagtcatagaagttgtacctctttac
atcaagacggcatcagtcttctacggtcgtattgtcaggaaagaggacagaggttttgat
gacttggcatctgagatggcttcctactacgctgataagaaaccaggagccaaaggggtg
ttggagggaggcttatacgccgtgcaggaggacaacgtcttccacagggtgaagatcctc
tctgtccccgaaagaggtgacagcctgtttttcagggtcttcgttcggttcattgatgta
ggaaaggaggaggaggtgaaatcctatcagatcctccagctgccggagcagtttcactct
ctgcccagccaggccttggagatcatcgtctgccgagtcaaaccggctgacgccgagatg
gactggcacccaaaggtcaacagagccatcagccagaaggtccgaggtctgcagcaccgg
gccagagcagtcctcagtctgggaaacaccgtctttgttgatcccatggtccgggtgacc
caggtgccaggtatgaaaaccgtcatcaatgaatacaacgtccagtctgagatcctgagt
actgggaagggagtcagcaacccagagcatctggacctcctgagggcgctgtgccaggag
agcgaggtcagcagcagcaaggaggcgggccacatttctgggtttgggggtgtgtcagtg
tctctggaagtcaggatcaaagctgaggaagaagttctggctgaagtcttcagagcagcc
gaggtcaggaagctcgctgaccgtccgcaactcgagccatgtgagccattaagtccagta
tcttcaatgaaacagaccccggtcccagaaccaccggcacctgaactccacttgggccca
gtgtttgatcagagatccccgtcagatatcagggctgcaaatgaacagagaaacaatcac
atttctgatctgcagtcagttgaacagaagacgaggagcagaggtggaggaaaactttgc
cccacaaccggccaggctgcttgtctccacacctgtgataatggttttcctgcaggtgac
gatcaaagcaacagccagcaggtcagcatcagcactaatggaacagacaatgatgactcc
acaaaaagttttcatccccaggtccgttggtaccagacatccgactctgtgattgtaacg
gtgaaactgatcaacccagagagtcagcgctgtgacttctaccaagacagagtcatctac
agtggcagagtgaacggtcggtcctacagagccgacctcgagcttcaggccgacattgct
gcggaccgctgctgctgggaaatgaagtccaatgagccagtcctcaaactggtcaaacaa
cagcacggatactgggaaaaactgctcaggaataagaatatttttgtgagttatgatatg
gagcacatcgaagaggaagaagacagagcaccaaatggtctttggtttgtggaggacaca
ggagaggataaccggatgacagtgcccccatccacagggggggggggtcaccgagtggat
agatga
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integrated database retrieval system
