Xiphias gladius (swordfish): 120793721
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Entry
120793721 CDS
T07311
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xgl00535
]
120793721 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
xgl00537
]
120793721 (gpc6a)
Proteoglycans [BR:
xgl00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
120793721 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
xgl00537
]
Others
120793721 (gpc6a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Glypican
SpoIVA_C
Serglycin
Motif
Other DBs
NCBI-GeneID:
120793721
NCBI-ProteinID:
XP_039990005
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Position
LG1:22967417..23182014
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AA seq
560 aa
AA seq
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MYAMWRLQVALCTLSLLSLSSAGESKARSCSEVRQAYNAKGFSLVNVPHQEISGEHLRVC
PQGYTCCTSEMEDKLNQQSKLEFENLVEESSHNMRTTFVSRHKKFDEFFLELLDNSEKSL
NSMFTRTYGKLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWSRLLERMFQLLNSQY
HFTDDYLECVSKYTDQLKPFGDVPRKLKAQVTRAFIAARTFVQGLMVGREVANRVAKVNV
VPACVRALTKMLYCPYCRGMPGLKPCHNYCHNVMRGCLANQADLDPEWNFFIDAMLLVAG
RLEGPFNIEAVIEPIDIKISEAIMTMQDNSMQVSAKVFQGCGQPKPSGIGRSARGISDVF
SARFRPYTPEERPTTAAGTSLDRLVTDIKEKLKESRKFWSNLPDDICAKGKLTESNEEQC
WNSHTKGRYFPEVVKEGLTNQVNNPEVDVDITRPDTLIRQQIMALRVMTNKLKNAYNGND
IYFQDSSDEGSSSGSGSGCSDGCTTEFVFVGTEAPVIGADRSDERAAAAAAGKSLSRGPS
LLLVIAALTLPLWATQTQWR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcgatgtggagactgcaagtcgccttatgtactctgtcgttgctgtccctgtca
tctgctggtgaaagcaaagcgcggagctgtagcgaggttaggcaagcttataacgctaaa
ggattcagcctcgtcaatgtgccccatcaggaaatatcaggtgagcacctgcgtgtctgt
cctcagggatacacctgctgcacgtccgagatggaggacaaactcaaccagcagagcaaa
ctggagtttgagaacttggtcgaggagagcagccacaatatgaggacgacatttgtctcg
aggcataaaaagtttgatgagtttttcttggagcttctggacaattctgagaagtctctc
aacagtatgttcacacggacatacgggaagctgtatatgcagaactcagaggtgttccag
gacctgttcactgagctaaagcgatactacacggggggcaacgtcaacctggaagagatg
ctgaatgacttctggtccaggctgctggagcgcatgttccagttactcaactcccagtac
cacttcacagacgactacctggagtgcgtcagtaaatacacagatcagctaaagcccttt
ggggacgtgcccaggaaactcaaggcccaggtcaccagggccttcatcgctgcacggacc
tttgtccaggggctaatggtgggtcgggaggttgcaaacagggtcgccaaggtgaatgta
gttccagcatgtgtcagagccttgaccaagatgctgtactgtccatattgtcgtgggatg
cctgggctgaaaccctgtcacaactactgtcacaacgttatgagaggatgtctagcgaac
caggcagacctagatcctgaatggaacttcttcatcgatgctatgttactggtggcagga
agactggagggacccttcaacattgaagcagttatagagccaattgacatcaagatctct
gaggctatcatgaccatgcaggacaacagcatgcaagtgtcagccaaggtttttcaaggg
tgtggccaaccaaagccatcaggaataggcaggtctgcacgtggcatttcagatgtgttc
agtgctcgcttcagaccctacacccctgaagagaggccaaccacagcagctggaacaagc
ctggatagactggtgactgacatcaaagagaagttgaaggagtccaggaagttctggtcc
aacctgccagatgacatctgtgccaagggcaagctcacagagtctaacgaggagcaatgc
tggaacagccacactaagggcagatattttcccgaagtggtgaaggagggtctaaccaac
caagtgaacaacccagaggtggatgtggatataaccaggcctgacacactgatccggcag
caaatcatggctcttcgtgtcatgaccaacaagctaaaaaatgcctacaatggaaatgac
atctacttccaggactccagtgatgagggcagtagttctggcagtggcagcggctgctct
gacggctgcacaacagagtttgtttttgttggaacagaggctcctgtaatcggagctgac
aggagtgatgaacgcgcagcagcagcagccgcaggcaagtcgctttcccgtggaccctcc
ctactgctggtgattgctgccctcacactcccactctgggcaacgcagactcagtggaga
taa
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