Xiphias gladius (swordfish): 120793736
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Entry
120793736 CDS
T07311
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120793736 (lrrc4ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xgl04515
]
120793736 (lrrc4ca)
Cell adhesion molecules [BR:
xgl04515
]
Immunoglobulin superfamily
NGL family
120793736 (lrrc4ca)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
DUF7617
Ig_6
Sp38
DUF4293
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
120793736
NCBI-ProteinID:
XP_039989992
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All DBs
Position
LG8:12784638..12787376
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AA seq
648 aa
AA seq
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MLNKMTSSQQQQMMRGPRWNRALSDPLFVLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRKIELGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVRLDELEMSGNQLSVIRPGSF
KGLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPAHHKGRYIGELDQNYFHCYAPVIVEP
PTDLNVTEGSAAELKCRASSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETIETPHNEGFTTTVQQKVGP
TPSAGTWESVSPTSTTTTTFRTPLATRATEKTYTIPVTEVGGEGSLNGLDEVMKTTKIII
GCFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPGMEGHLTLPP
LEHEHLNHYNTYKTAYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacaagatgacctcctctcagcagcagcagatgatgcgaggtcctaggtggaac
cgggccttgtccgaccctttgtttgtgctgcttctggccctccagctgctagtggtggca
gggctggtacgtgctcagacgtgcccctctgtctgctcctgtagtaaccagttcagcaaa
gtcatctgcacccgccgaggcctgcgggatgtccctgatggcatctctaccaacactcgc
tacctgaatctgcaagaaaatctcattcaggtcataaaggtggacagcttcaagcaccta
agacatctggagatcctgcagctgagcaaaaaccacatacgcaaaattgagctgggcgcc
ttcaatggactggccagcctcaataccttggagctttttgataaccgcctcaccaccatc
ccaaacggggcatttgagtacctgtcaaaactgaaggagctttggttgaggaataacccc
atagagagcattccctcctatgctttcaacagagtgccctcattacggcgcttggacctt
ggggagctcaaacggctctcctacatatctgaaggggcttttgaagggctgagcaatctg
cgctacttaaatctgggaatgtgcaatctgaaggaaattcccaaccttattcccctggtg
aggctggatgaactggagatgtcggggaaccaactatctgttatccgacctggctctttt
aaagggctcatccatttgcaaaagctatggatgatgcatgcccagatccagaccatagaa
aggaactcttttgatgacctgcagtcactagtggagctcaatctagcccacaacaacctt
accctcctgccccatgatctcttcactcctttacatcacctggagagggtacacttgcat
cacaacccttggaattgtaactgtgacatcctctggctaagctggtggcttaaggagatg
gtaccagcaaacaccagctgctgtgcccgctgcagctcacctgctcaccataagggacga
tacattggcgagctggaccagaattactttcactgttatgctcctgttattgtggagcct
cccacagacctaaatgtgacagagggaagtgctgcagagttgaaatgcagagccagctct
ttgacttcagtaagctggattacacccaatggttccatcatgacacatggtgcatacaag
gtcaggatctctgtgctgaatgacggcactctgaacttcactaatgttaccatgcaggac
acaggcacatacacatgtatggtcagtaattctgcaggtaacacaacagcatctgccacg
ctcaatgtgtcctctacagagaacagcagcttcagctacttcaccacagtgacagtggag
accatagaaacgccacataatgaaggcttcaccactactgtgcaacagaaggtgggcccc
accccctccgctggtacttgggagtctgtttcacccacctctacaactaccaccacattt
cggaccccactcgccacccgtgccacagaaaagacttacacaattccggtcacggaggtg
ggtggggagggctctctaaacggcttggatgaagtgatgaagacaaccaagatcatcatt
ggctgctttgttgcaatcacactcatggcagctgtcatgctgattatcttctacaagatg
cgcaaacagcaccaccagcagaaccaccacgcacccacacgcactattgagatcattaat
gtggatgaggactgtgtaacaggaggcccaggcatggagggccacctgactctgcctcct
ctcgagcatgagcacctcaaccactataacacctacaagactgcatacaaccatgcctcc
actatcaactccatacacagctcagcgcatgaacctttgttaatccgggccagctcaaaa
gacaatgtacaagagacccaaatctaa
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