Xiphias gladius (swordfish): 120793996
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Entry
120793996 CDS
T07311
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120793996 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xgl03021
]
120793996 (smarcd2)
03036 Chromosome and associated proteins [BR:
xgl03036
]
120793996 (smarcd2)
Transcription machinery [BR:
xgl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120793996 (smarcd2)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120793996 (smarcd2)
PBAF complex
120793996 (smarcd2)
GBAF(ncBAF) complex
120793996 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
120793996
NCBI-ProteinID:
XP_039990428
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All DBs
Position
LG9:complement(12198703..12209411)
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AA seq
509 aa
AA seq
DB search
MHRAEKMASRGGFTGPPMNPNMNPMNVGHSAGMRMPGMPQPSAGYPRSMNSAAQYLQRPG
MPPSRVGGPMGSMAGQLPGPSYGGGNMPMRPGMGPPSMDASRKRFLHQHQHQQQDALGGG
LRRGAKRRKMADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPIMQ
KRKLRIYISNTYTPSKPEGEEAEKVSSWELRVEGKLLEEPGKQKRKFSSFFKSLVIELDK
ELYGPDNHLVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLG
VHTQTRASIMQALWLYIKNNKLQDGHEKEYINCNRYFRQIFGCPRMRFSEIPMKLAGLLQ
HPDPIIINHVISVDPTDQKKTACYDIDVEVDDPLKGQMNSFLSSTTNQQEIAALEMKIHE
TIEYINQLKTERDFMLSFSNNPQDFIQDWLKSQSRDLKLMTDVTGNPEEERRTEFYQAPW
VPEAVGRYIYSKVQQRRQELEQVLGIRLT
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgggccgagaagatggcatcaagaggaggcttcacgggtcccccgatgaatccg
aatatgaaccccatgaatgttgggcattcagcgggcatgaggatgccaggaatgccgcaa
ccttcggcgggatacccccggagcatgaacagcgctgctcagtacctccagcgcccaggg
atgcctcccagtagggtggggggccccatggggtcaatggcgggccagctgcctggtccc
tcttacggtggtgggaacatgcccatgcggccaggcatggggcctccaagcatggacgcc
tcgaggaagcggtttcttcatcagcatcaacatcagcagcaagacgcattgggaggaggc
ctcagacgaggagcaaaaagacgcaagatggcagacaaggttctcccacagcggatcaga
gacctggtcccagagtcccaggcctacatggacctcttggcctttgagaggaaactggat
cagaccatcgcccgaaagcgtatggagattcaggaagccatcaagaagcccattatgcaa
aaacgcaaactcaggatctacatttccaacacatacacacccagcaagcctgagggcgag
gaggcagagaaggtgtcctcctgggagctgagagtggagggcaaacttctggaggaacct
ggcaagcaaaagaggaagttctcatctttcttcaagagcctggtgattgagctagataag
gagctctatggacctgacaaccacttagtagagtggcatagaatgcccaccactcaggag
acagatggtttccaggttaaaagacccggtgacgtgaatgttaaatgcaccctattgctc
atgcttgaccaccagccccctcaatacaaactggacccgcggctggctcgtcttctgggt
gtgcacacgcagacacgggccagcatcatgcaagctctctggctctatatcaagaacaac
aagctgcaggacggtcatgagaaggagtacattaactgcaaccgctatttcagacaaatc
ttcggctgtcctcgcatgaggttctccgagattcccatgaaactggcgggcctgctgcag
caccctgaccccatcattatcaatcatgtcattagtgtggaccccacagatcagaagaag
acagcttgttacgacatcgatgtggaggtggatgacccactgaagggccaaatgaacagt
tttttgtcctcaacaaccaaccagcaggaaattgctgctctggagatgaagatccacgag
acgattgagtacattaaccagctaaagactgagagagactttatgctgagcttcagcaat
aatccacaggacttcattcaggactggctcaagtctcagagcagagatcttaagttgatg
acagatgtgacaggaaacccagaggaagaaaggaggactgagttctaccaggcaccctgg
gtacccgaggcagtgggcagatacatttactccaaagtgcaacagagaagacaagagttg
gagcaggtgttgggtatccgactcacctaa
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