Xiphias gladius (swordfish): 120793997
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Entry
120793997 CDS
T07311
Symbol
psmc5
Name
(RefSeq) 26S proteasome regulatory subunit 8 isoform X1
KO
K03066
26S proteasome regulatory subunit T6
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120793997 (psmc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
xgl03051
]
120793997 (psmc5)
Proteasome [BR:
xgl03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
120793997 (psmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_5
AAA_22
AAA_16
AAA_lid_PRS2_C
PRS7_OB
RuvB_N
nSTAND3
TIP49
AAA_3
AAA_28
Mg_chelatase
NPHP3_N
AAA_33
AAA_18
AAA_14
Parvo_NS1
ATPase
AAA_17
IstB_IS21
PhoH
AAA_24
AAA_7
FapA
DUF815
AAA_25
AAA_11
APG6_N
Sigma54_activat
ABC_tran
bpMoxR
DUF5906
RNA_helicase
Zeta_toxin
AAA_19
TsaE
DivIC
HR1
Motif
Other DBs
NCBI-GeneID:
120793997
NCBI-ProteinID:
XP_039990432
LinkDB
All DBs
Position
LG9:complement(12193279..12198023)
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AA seq
430 aa
AA seq
DB search
MCAFILNKILCRIRPISSGCRNFKMEVDGIDHMEMGESKGGSGLRQYYLSKIEELQLTVN
EKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRVMDKKKVLVKVHPEGKFV
VDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDK
QIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG
SELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLEL
LNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM
NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE
KNMSIKKLWK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgcttttattttaaataaaatactctgccggatacgtccgatctcaagcggatgc
agaaatttcaagatggaggtagacgggattgatcatatggagatgggagagagtaaaggt
ggctcaggtctccggcagtactacttgtctaagatagaagagttacagttgacagtgaat
gaaaagagccagaatctcagacgtctgcaggcacagaggaatgagcttaatgccaaagtg
cgtctccttcgtgaggagctgcagttactgcaggagcagggatcctacgtaggtgaagtg
gttagagtcatggacaaaaagaaagtgctggttaaggtgcatccagaaggaaaatttgtc
gtggatgtggacaagaacatcgacatcaatgatgtgactccaaactgccgtgtggctctg
cgcaacgacagctacaccctgcacaagatcctgcccaacaaggtggaccctctggtatcc
ctcatgatggtggagaaggtgccagactccacctatgaaatgattggtggcctggataag
cagatcaaggaaatcaaggaagttattgagctgcctgtcaagcacccggagctgtttgag
gctttaggcattgcacagcctaagggtgtgctgttgtacggtcccccaggtacagggaag
accctgctggccagagctgtggcccaccacactgactgtaccttcatcagggtttccggc
tctgagctggtccagaagttcatcggagagggtgcccgcatggtgcgcgagctgtttgtc
atggctagagagcacgctccctccatcatcttcatggatgagatcgactccattggctcg
tctcgcctcgagggcggctcaggtggtgacagtgaggtgcagaggacaatgttggagctg
ctcaatcagcttgacggcttcgaggcaactaagaacatcaaggtcattatggctaccaac
cgtattgacattctggactctgctctgctcagaccaggcaggatcgacaggaagattgag
tttccccctccaaatgaagaggcccgtttggacatcctgaagatccactccaggaagatg
aatctgacacgtggcattaacctgaggaagattgcggagctgatgcctggagcctcgggt
gctgaggttaagggtgtttgcacagaggcaggcatgtatgctctgagagagagaagagtt
cacgtcacccaggaggattttgagatggctgtggcaaaggtgatgcagaaagacagtgag
aagaacatgtcgatcaagaagctgtggaagtaa
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