Xiphias gladius (swordfish): 120794003
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Entry
120794003 CDS
T07311
Symbol
nrxn1a
Name
(RefSeq) neurexin 1a isoform X1
KO
K07377
neurexin
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120794003 (nrxn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120794003 (nrxn1a)
Membrane trafficking [BR:
xgl04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
120794003 (nrxn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
120794003
NCBI-ProteinID:
XP_039990443
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All DBs
Position
LG9:complement(7674338..7729410)
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AA seq
1476 aa
AA seq
DB search
MSVMAVCVWAAAPLLFLGLCLCSVGGQAQGEVLEFGGVSSQWGRFPVWNACCESVLSFSL
RTHSQEGLLLYLDDEGFCDFLELLLLHGHLRLRFSIFCAEPAELQSGVAVSDGRWHAVRV
KRDWRNTSLEVDGRLEGWAEVKSKRRDMTVFSHTFMGGVTPELHSSPLRLTSPSVREHPA
FRGWITAVSINASLVALDGSEGVTVMAGCGPDHQCQNGGVCSVVNDQAICDCSHTGYQGN
DCSEEQSYTPGLAHLMIGDQAREEYFATFKGSEYFCYDLSPNPIQSSSDEITLSFKTLQR
NGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLR
QVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKN
NDVRLELSRLAKQGDPKMKVSGVVSFKCESVATLDPVTFDTPESYVALSKWTAKKAGSIS
FDFRTTEPNGLMLFSHGKPRQQQRKDPRTPPTVKVDFFAIEMLDGHLYLLLDMGSGTTKT
KAIDRKVNDGEWYHVDFQRDGRSGTISVNSVRTAYTAPGDSEILDLDDTLYLGGLPEDRA
GLIFPTEVWTALLNYGYVGCIRDLFVDGQSKDIRRLAEAQRAVGVKPSCSREPPKQCLSN
PCQHNGICREGWNRYVCDCSGTGYLGRSCERDATILSYDGSKFMKVQLPVAMHTEAEDVS
LRFRSQRAYGVLMATTSRNSADTLRLELDGGRVRLTVNLDCIRINCTASKGPETIFAGSG
LNDNEWHTVRVVRRGKSLKLTVDDLQPVEGQMAGDHTQLEFHNVETGIVTEKRFIPAVPS
NFIGHLQGLTLNGMPYIDLCKNGDIDYCELNAVIGYKSIVADPVTFRSRSSFVTLPTLQA
YYSMHLFMQFKTTSPDGLILFNRGDGNDFIVIELVKGYLHYISDLGNGAHLIKGNSNSPL
NDNHWHNVHISRDTNNLHTVKIDTKVTTQTTMGAKNLDLKGDLYIGGVSKEMYRDLPKLV
HSREGFQGCLATVDLNGRLPDLLADALATMGQVERGCEGPSTTCQEDSCSNQGVCLQQWE
GFTCDCSMTSYAGPLCNDAGTTYIFGRDGGMVVYTWPPNERPSTRADRLALGFSTQQKHA
ILLRVDSASGLGDYLQLQIDKGNIRVVFNVGTDDINIEESSKFVNDGKYHIIRFTRSGGN
ATLQLDDLPVIERYPSGNIDNERLAIARQRIPYRLGRVVDDWLLDKGRQLTIFNSQTTVR
VGGGERGTGMFQGQLSGLYYNGLRILNMAAEGHPHIRVEGSARLVGDMPSSSITPQSSAA
AGGNRSDSAPSISDITTTTATNRKQGATQQSADDLLVASAECPSDDEDIDPCDPSSARPP
LPELKVFPGPSEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRN
YISNSATQPNGSAKDKPLGIAKISKNKKNKDKEYYV
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgatggcggtgtgtgtttgggcggcagcccccctgctcttcctggggctgtgc
ctgtgcagcgttgggggccaggcccaaggggaggtcctggagtttggaggtgtttccagc
cagtggggacggttccctgtgtggaacgcctgctgtgagagtgtgttaagcttcagcctg
cggactcacagccaggagggcttgctgctctacctggatgatgagggcttctgcgacttc
ctggagctgctgcttctgcatggccacctccgcctgcgtttctcaatcttctgtgctgaa
ccagccgagctgcagtcaggcgtggcggtgagtgacgggcgttggcacgcagtgcgtgtc
aagcgggactggaggaacacctcgttggaggtggatgggcggctggagggatgggcggaa
gtgaagagcaagagaagagacatgacagtattcagccacaccttcatgggtggggtaacg
ccagagcttcactcctcgcccttgcgcctcacctccccttcagtgcgggaacaccccgcc
ttccgtggctggatcacggcggtgagcatcaacgcctcactggtggcactggatggctca
gagggcgtcactgtaatggccggctgtgggccggaccaccagtgccagaacggaggggta
tgcagcgtggtcaacgaccaggccatctgtgactgctcccacactggttaccaaggcaac
gactgcagcgaagagcaaagctacactccaggtctggcacacctgatgatcggcgaccaa
gctcgtgaggagtattttgccactttcaagggttctgagtacttctgctatgacctgtcg
cccaaccccatccagtctagcagcgatgaaatcacgctctccttcaagacactgcagcgc
aacggcctgatgctgcacaccggcaagtcagccgactatgtcaacctggcactgaagaac
ggtgctgtgtcacttgtcatcaacctcggctctggggccttcgaggccttggtggagccc
gtcaacggcaagttcaacgacaacgcctggcacgacgtcaaggtcacccgcaacctgaga
caggtgaccatctctgtggacggcatcctgaccaccacaggctacacccaggaggactac
accatgctgggctctgatgacttcttctatgtgggagggagccccagcaccgctgacctg
cccggttctccagtcagcaataacttcatgggctgtctcaaagaggtggtgtacaagaat
aatgatgtacggttggagctgtctagactggctaaacagggagacccaaagatgaaggta
agtggggtggtgtcctttaaatgtgagagtgtggccacgctggaccccgtgacctttgac
accccagagtcttacgtggcactgagcaagtggacagcgaagaaggcaggatccatctca
ttcgacttcaggaccacagagcccaatgggttgatgcttttcagccatggaaaaccccga
cagcagcaacgcaaggacccacgcacacctcccacagtcaaggtggatttctttgccatt
gagatgctggatggacacctgtacttgctgctggacatgggctcgggaaccaccaaaacc
aaggccatcgacaggaaggtcaatgatggagaatggtaccatgttgactttcagagggac
ggacgctcaggaacaatctcggtgaacagtgtaagaacagcatacacagctccgggggac
agtgagatcctggacctggatgacaccttgtacctcggaggactacctgaggaccgtgct
gggctgatcttccctacagaggtgtggacagcgctgttgaactatggttacgtgggctgc
atcagagacctgtttgtagacgggcagagcaaagacatccggcggctggccgaggcccag
agggcagtgggggtgaagccctcgtgctctagagagccacccaaacagtgcctttccaac
ccctgccagcacaacggcatctgcagggagggctggaatcgctacgtctgcgactgctct
gggactggctacctgggacgctcctgtgagagagatgcgactatcctgtcatatgacggc
agcaagtttatgaaggtgcagttgcctgttgcgatgcacactgaggcggaggacgtctcc
ctacgctttcgctcccagcgggcgtatggcgtcctcatggcaactacgtctcgtaactcc
gcagacacccttcgtctggaacttgatgggggccgtgtccgacttacagtcaacctagac
tgtatcaggataaactgtacagccagtaaaggcccagagaccatctttgcggggtcgggc
ctcaatgataatgagtggcacacagtgagggtagtccggcgtggcaagagcctcaaactc
accgtggatgacctgcagcctgttgaaggtcagatggcaggcgaccacacccagctggag
ttccacaatgtggagaccggtatagtgacggagaaacgcttcatacctgccgtaccctcc
aatttcatcggccacctccagggcctgacgctgaatggcatgccctacatcgacctgtgc
aagaacggcgacatcgactactgtgagctcaatgctgttatcggctataagagcatcgtg
gcggaccctgtcaccttccgctcgcgctccagtttcgtcacgctgcccacgctgcaggcc
tactactccatgcatctcttcatgcagttcaagacaacgtcccccgacggccttatactc
ttcaatagaggagacggcaatgacttcatagtgatagagctggttaaaggctacctgcac
tacatttctgacctgggcaatggggcacacctgatcaagggcaactctaacagtcctcta
aatgacaaccactggcacaatgtgcacatatcccgagacactaacaatctccacacagtc
aagattgacaccaaagtcaccacgcagaccaccatgggtgccaagaacctcgacctaaag
ggtgacctgtacattgggggcgtctccaaagagatgtaccgagacctgcctaagctggtc
cactcccgtgagggatttcagggttgcctagcaacagttgatctaaatggccggctccct
gaccttttggctgatgccttggcaaccatgggacaagtggagagaggctgtgaaggtccc
agcactacatgtcaggaagactcctgctcaaatcagggagtttgtttgcagcagtgggag
ggcttcacctgtgactgcagcatgacttcgtatgctgggccactatgcaatgatgctggg
accacttatatctttgggcgtgatggaggcatggtggtttacacgtggccccctaatgaa
cgtcccagcaccagggcagaccggctcgcccttgggttcagcacccaacagaaacatgcc
attctgcttagggtggacagcgcatctggcctgggggactaccttcagctgcagatagac
aagggcaacattagagtagtgtttaatgttggcactgatgacatcaacatcgaggagagc
tccaagtttgtcaacgatgggaagtaccacataattcggttcacccgcagcggaggcaat
gcaaccctccaactggacgacctgccggtcatagagcgctatccctcaggcaacattgat
aacgagcgcctggccatcgccagacagcgaatcccctatcggctcggtcgagtagttgac
gattggctactcgacaaaggccgccagctgaccatcttcaacagccagacgacagtgcgt
gttggtggaggcgagcgaggtacaggcatgttccagggtcagctgtctggcctctactac
aacggcctccgcatcctcaacatggccgccgaggggcacccacacatcagagtggagggc
agcgcacgattggtcggcgacatgccctcctcctccatcaccccgcagtccagtgctgca
gctggaggcaaccgctccgactctgccccatccataagtgacatcacaaccaccacggcc
accaaccggaagcagggcgccacacagcagtcagcagacgacctgctggtggcatcagct
gagtgtcccagtgatgacgaagacattgatccctgtgaccccagttcagcccgccctccc
ctgccagaactgaaggtgttccctggtccatctgaggtggtgcgagagagcagcagcacc
acaggcatggtggtgggcatcgtggcggccgccgccctctgcatcctcatcctcctctat
gccatgtacaagtaccgcaaccgcgacgaaggctcctaccacgtggacgagagccgcaac
tacatcagcaactcggccacacagcccaacggcagcgccaaggacaagccactgggcatc
gccaagatctccaagaacaagaagaacaaagacaaggagtactatgtctga
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