Xiphias gladius (swordfish): 120794072
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Entry
120794072 CDS
T07311
Symbol
trim65
Name
(RefSeq) tripartite motif-containing protein 65 isoform X1
KO
K12031
tripartite motif-containing protein 65
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120794072 (trim65)
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120794072 (trim65)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-B_box
zf-RING_5
Prok-RING_4
U-box
Motif
Other DBs
NCBI-GeneID:
120794072
NCBI-ProteinID:
XP_039990622
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Position
LG9:18991727..18998719
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AA seq
530 aa
AA seq
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MLCANVSVEVVSGLSSEMESQNSNLICAICLERFRIPVTIPCGHTFCQKCITIHWDTKSK
ADIGPHCPFCNEEFDTRPVLKRNVSLSVLTEAANSSGPSCRESLMRGSEGARAMLLCDRH
KKPLVYYCRQDKMSVCCECGISECLAHEKVLLETERENQELLLERKSKEVGKLVEETQKS
MNDLAENINQAKVTLQQTSAWVSVKFSTLMSILAEKQKATELFIDEQKEVAITEAEARLA
ELEEHSQRLKESQNQIAALHNLPDTELIKESTLIEVPRFKDIPTDVTPSLQDRLNGVTDV
LSRASKLLCEDLEKAVSTAVGQDKDGSPQDKRPILAVVPSPAAPCHPGGKEGLSAYRCSL
TFDPRTANGHLFLSQENRKAEHLTSGPRPVPAHEARFDHTWQVLCFQGFTHGQHYWELEV
SKPWAYLGVTYEAIPRKEKGKKCMVGMNELSWSLQLDEHQLSAWHNGRRETLAGHSQHSR
IGMLLDYEAGTLTYYGDGQTRLHAFHCAFTQELFPACWIGEGVSITLCST
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgctatgcgcgaatgtatctgttgaagtggtgtctggtctttcttcagagatggagtct
cagaattccaacctgatctgcgccatatgcctggagcgcttccggatccctgtaaccatc
ccctgcgggcacaccttctgtcaaaagtgcatcaccattcactgggacaccaagagcaag
gctgatatcggacctcactgccctttctgcaatgaagagtttgacaccaggcccgtcctc
aagcgcaatgtgtccctgtcagtcctgaccgaggctgcaaacagcagcggcccctcctgt
agagagtcgctcatgaggggaagtgaaggggcgagagccatgctgctgtgcgatcgccat
aaaaagcccctggtttattattgcaggcaggataaaatgtccgtgtgctgcgagtgtggt
atttcagaatgcctggcccatgagaaggtcctgttggagacagaaagagaaaatcaagag
ctgctgctggaaaggaagagtaaagaggtggggaaactcgttgaagagacgcagaaaagt
atgaatgacttggctgagaatatcaatcaagcgaaggtgactcttcaacagacttcagcc
tgggtcagtgtcaagttctccaccctgatgagcatcctggctgagaagcagaaggctaca
gagctcttcattgacgagcagaaggaggtggccatcactgaggcagaggcacggctagct
gaacttgaggagcactcccagagactgaaagagagccaaaaccagatagcagctcttcat
aacctccctgacacagagctcatcaaggaatcgacgctcatagaagtgccacgttttaag
gatattcccacagatgtaacccctagccttcaagatcgattgaacggcgtcacagacgtg
ctgtcccgggcctccaagctgctgtgtgaggacctggagaaagctgtgagcacggctgtg
ggtcaggacaaagacggttctcctcaggataagaggcctatcctagctgtggttcccagt
ccagctgctccctgccaccccggtgggaaagagggccttagcgcttaccgatgctctctg
acctttgacccccgtacggccaacgggcacctgtttctgtcccaggagaaccggaaggcg
gagcacctgacgtctgggccgcggcccgtcccggctcatgaagcccgcttcgatcacacc
tggcaggtgctctgctttcagggcttcacccacgggcagcactactgggagctggaggtg
tccaagccctgggcctacctcggggtaacctacgaggccatccctaggaaggagaaaggc
aagaagtgcatggtgggtatgaacgaactgtcctggagcctgcagctggacgagcatcag
ctcagcgcctggcacaacggccggcgggagaccctggccggccactcccagcacagtcgc
atcggcatgctgctggactacgaggcggggacgctcacctactacggagacgggcagacc
aggctccacgccttccactgtgccttcacccaagagttgttccccgcctgctggatagga
gagggggtcagcatcactctctgctccacatga
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