Xiphias gladius (swordfish): 120794329
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Entry
120794329 CDS
T07311
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04137
Mitophagy - animal
xgl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120794329
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120794329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120794329
Enzymes [BR:
xgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
120794329
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120794329
Multi subunit type E3
ERAD complex
120794329
LMBR1L-GP78-UBAC2 complex
120794329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-rbx1
zf-RING_UBOX
zf-RING_11
zf-ANAPC11
zf-RING_16
zf-RING_5
Prok-RING_4
zf_RING_Vps8
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_Vps41
MRAP
Motif
Other DBs
NCBI-GeneID:
120794329
NCBI-ProteinID:
XP_039991243
LinkDB
All DBs
Position
LG1:13368806..13379018
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AA seq
622 aa
AA seq
DB search
MPLLFLERFPWPSLRTYTVLSVALLAGSIFSAYTIVTDPGFGVLETDETPAPSELDLEHL
NNDISNTELATTVLWYLVTDSLFVWVLVNTFCCSLMIIAKMIQYVVFGPLRVSEKQHLKD
KFWNFIFYKFIFIFGILNVQTVEEVVMWCLWFSALVFLHLMVQLCKDRFEYLSFSPSTPM
SSHVRVLCLLVSLLLDCLGMAVVCGLLGASHGMHTLSFMAAECLLVTVRTGHVIMRYSIH
LWDLNHPGTWESKGTYVYYTDFIMELSVLFLDLIHHIHMLLFGNIWLSMASLVIFMQLRY
LFHEVQRRVRRHKNYLRVINNMEARFAVATAEELAANDDDCAICWDTMLTARKLPCGHLF
HNSCLRSWLEQDTSCPTCRTSLNINGDGGQARGQQQGAGLEGNIGPVGAAPEARPHINQH
NHFFHFDGSRIASWLPSFSVEVMHTTNILGIAQANNSQLMAMAHQIQEMFPQVPSYLVMQ
DLQLTRSVEVTTDNILEGRIQVPFPTQAIERAPIQVSPAADEQAGPSGAAEQGLSEPDNM
EVRGGRFSKSAEERQKMLRQRKEELLQQARRRYLNKSPEDQDEDLPGLEEDTVPELDSTV
LRRRTVAAAAERRMQNQQDPSP
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgctgtttttggagaggtttccttggcccagcctgcgtacttacacagtactg
agtgtggctttgctggctggcagcatcttcagtgcctacaccattgtgactgatccaggc
tttggggtcctggaaactgatgaaacaccagctccttctgaattggatcttgaacatctg
aacaatgatattagtaacacggaactggcaaccactgtcctgtggtatcttgtcacagac
agtctctttgtatgggtgttagtcaacacattctgctgctctttgatgataattgcaaaa
atgattcagtatgtggtgttcggcccacttagagtcagtgagaagcagcatctgaaagat
aagttctggaacttcatcttctacaagttcattttcatctttggcatattgaacgtgcag
acagtggaggaggtggttatgtggtgtttgtggttctctgccctggtctttctccacctc
atggttcagctctgcaaagaccgatttgaatatctgtcattctccccctccactcccatg
agcagccatgtgcgagtgctttgtttgctggtctcccttctgttggactgcttgggcatg
gctgtggtctgtggtctgttgggagcttcccatgggatgcacaccctctcctttatggca
gcagagtgtctactggtgactgtacgcactgggcatgtcataatgcggtactccattcat
ctgtgggatctaaaccatccagggacttgggagagtaagggaacatatgtctactacaca
gacttcatcatggagctatctgtcttgtttctggacctcatacaccatatccatatgctg
cttttcggtaacatctggctgtccatggcaagcttggttatcttcatgcagctgcggtat
ctgttccatgaggtccagcggcgcgtccgccgacacaagaactaccttcgtgtcatcaac
aacatggaggccaggtttgctgttgctactgcagaggagctcgcagctaatgacgatgac
tgtgccatctgctgggataccatgttgacagcacgcaaactaccctgcggccatctcttc
cacaactcttgtttgcgctcatggcttgagcaggacacctcgtgcccaacatgccggaca
tccctgaacattaatggggatgggggccaggcgagaggccagcagcagggcgcaggtttg
gaaggcaacatcggccctgtaggagccgctccagaggctagaccacatatcaaccaacac
aaccacttcttccactttgatggatctcgcattgccagctggctgcccagtttctcagtg
gaagtaatgcacaccaccaatatcttgggcattgctcaggcaaacaactcccagctcatg
gccatggcccatcagatccaggagatgttccctcaggtgccctcctacctggtcatgcaa
gacctgcagttgacccgctctgtggaggtcaccactgacaacatcctggagggacgcatc
caggtgcctttcccgacacaggccatagaacgtgcccctatacaggtgagccctgcagcg
gatgagcaggcagggcccagtggagcagctgagcagggcctcagtgagccagataacatg
gaggtcagaggaggtcgcttctctaagtcggctgaagagaggcagaagatgctaaggcag
aggaaagaagagttgctccagcaagcacgcaggagatacctgaacaaaagtccggaggac
caggatgaggatttgcctggactggaagaggacactgtcccagagttggactcaactgtg
ctgaggcgtagaaccgtggcagcagctgcagagagacgcatgcaaaaccagcaagaccct
tcaccctga
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