Xiphias gladius (swordfish): 120794426
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Entry
120794426 CDS
T07311
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04020
Calcium signaling pathway
xgl04080
Neuroactive ligand-receptor interaction
xgl04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120794426
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120794426
04082 Neuroactive ligand signaling
120794426
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xgl04040
]
120794426
Ion channels [BR:
xgl04040
]
Ligand-gated channels
Glutamate (ionotropic)
120794426
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
120794426
NCBI-ProteinID:
XP_039991445
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All DBs
Position
LG9:complement(6666830..6709237)
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AA seq
1392 aa
AA seq
DB search
MAIPRGQPPPSLWPPLFLLFLISSPLPLQARPLLLHPSINVAVVFSGSSYQNEVRGRLSG
ENFVDLPVVVSPVTVLVNDTNPRDLLTRLCDTMAMERLHGVVFEDDVGSSAGVQVAEVAQ
ILDFLSTQTALPIVGISGGSAVVIPYKAEGSSFLQMGASLEQQIVCMFKLMEEYDWGEFA
VITSLLPGYDTFVDIVQSYTDTSYFLWNLQDILTLEMSVGANDVKTKRMLQQVDSQVLLA
YCSYEEAQYLFHQAAEVGLLGPGYIWILPSLAVGNPDSPPPVSFPVGVIGVITDQWRKSL
RQRVREGVAIVAKGAESFKKRYGFIPEGHGDCNKPAKHSDNNTLFRHMLNVTWERRDLSF
NNQGFRSNPSMVFIALDRERLWDKVGTYARGILQVRYPVWPRYGNFLEHVSDDRHLTVAT
LEEHPFVMVENVDPGTGTCVRNTVPCRRQANHTESIIGHSESYTKLCCKGFCIDILKKLS
RTIKFSYDLYLVTNGKHGKLVRGIWNGMIGEVVYRRADMAIGSLTINEERSEIIDFSVPF
VETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSL
VSAKAPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTAN
LAAFMIQEQYIDTVSGLSDKKFQKPHEHYPPFRFGTVPNGSTERNIRSNYPDMHTHMMKY
NQKGVEEALESLKNGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKD
SRWKRPIDLALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAM
GLSLLVFAWEHLLYWKLRHSLHKSHKLDFLLAISRGIYSCFNGVEDPGRSSGLAKPDLTS
NYAQANMLKMLRTAKDLVSTANVESSLDNATKTIEQLSRHGGSLPVRVPQVTTEAAPGGF
AYVTENHSSLPQHSLTPPMTAVNALKQQRGVTRPTPLRYTLPTRSSSCLYDRPLPVSSLS
SPHLAVSEPLPYQHPHHYQTTGRLYVDTHPHSPFVPYADLQLPDIYTSHPVSSPQNQHVQ
AGFSRRKRRSKSFQCEDGDVERRQHRDQEKNGKSPVCLSELKANHLQDNHISAPSVESTY
SGEGPRVENYSSWPPEDLVLRGRRRHRRPSFLKATWGSEQIRQLDESQSSLSSQSPSTLP
DLFPCILTPTTPAKAYNPAHLRNNLCLPRNQAYLHIREDQRRPNGRKGQRLRYSHSTHLP
TYGEAVRHGTGLGRGMVRRATSLLSRQYAHYLNSYPGLPLYHGPLDLQHHSQASNGHPSP
SPVCQLLACGGGRCGGQRALLYQDSVYGAYGVYQGSQTGSETQACQGAGSQHAGSPCVLR
PWRRVSSLESEV
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggccattcccagaggacaacctcctccttctctttggcctccactcttcctcctcttc
ctcatctcctccccgctccccctgcaggcccggccactccttctccacccgtccatcaac
gtggcggtggtgttcagcggctccagctaccagaatgaggtcaggggtcgcctcagcggg
gaaaactttgttgacctgcccgtggtggtcagccctgtcaccgtgctggtcaacgacacg
aacccccgcgacctgctgacacgtctctgcgataccatggcaatggagaggctgcatggt
gtggtgtttgaggatgatgtgggctcgagtgctggtgttcaggtggcagaagtggcccag
atcctggacttcctctccactcagacagcactgccaatcgtgggcatcagtggtggctct
gcagttgtcataccatacaaggcagagggatcatccttcctgcagatgggagcatctctg
gagcagcagatcgtctgtatgttcaagctcatggaggagtatgactggggcgagtttgcg
gtgatcaccagcttgctgccgggatatgacacctttgtggatatagttcagtcttacaca
gatacctcctatttcctgtggaatctacaggatattttgactctggaaatgtctgtcggg
gctaatgatgtgaagaccaagcgcatgctgcagcaggtggattctcaggtcctgctggcg
tattgctcctatgaggaggcacagtacttgtttcatcaggcagctgaggtgggcctgctg
gggcccggctacatctggatcctccccagcctggccgtgggcaaccccgacagtcctcca
cctgtcagcttccctgttggtgtgatcggcgtgataacggaccagtggaggaaaagcttg
cggcagagggtgagggagggtgtcgccatcgtagccaaaggggccgagagctttaagaag
cggtatggttttattcctgagggacatggtgactgcaacaagccggctaaacactcagac
aacaataccctgttcaggcacatgctgaatgtgacgtgggaaaggagagatctgtcgttc
aacaaccaaggcttccgctcaaacccttccatggtcttcattgctttggaccgggagcga
ctctgggacaaggtgggtacgtacgctcgggggatcctccaagtccgctaccctgtctgg
cctcggtatggcaacttcctggagcacgtgtctgatgatcgtcacctgactgtggcaacg
ctggaggagcatcccttcgtcatggtcgagaacgtggacccgggcaccggcacatgtgtc
cgcaacacggtaccctgcaggcgccaggccaatcacacagagagtattattggccactca
gagtcctacaccaaactttgctgtaagggcttctgcatagacatcctgaagaagctgtcc
cgcacaatcaagttctcctacgacctctacctggtcaccaatggaaagcacggcaagctg
gtccgcgggatttggaacggcatgatcggggaggtcgtgtatagacgagctgacatggcc
attggctccctcactatcaacgaagagcgttcagaaatcatcgacttctcagtgccgttt
gttgagacaggcatcagcgtcatggtagcccgcagcaacgggacagtttccccatctgcc
tttcttgagccctacagcccagcagtttgggtcatgatgtttgtgatgtgcctgaccgtt
gtggcggtgacagtttttgtgttcgaatacttcagtccggttggctacaatcgcagtttg
gtgagcgccaaagctcccggtgggccaacgttcaccatcgggaagtcagtgtggctcttg
tggggcatcgtctttaacaactcagtccccattgaaaaccctaaaggaacaaccagtaaa
atcatggtcctggtctgggccttctttgctgtcatcttcctggcttcctatactgccaac
ctggctgccttcatgatccaggagcaatacattgacacagtgtctgggctctctgataag
aagtttcagaaaccacatgagcattaccctccttttcgctttgggacggttccaaatggg
agcacagagaggaatatccgcagcaactaccccgacatgcacacacacatgatgaaatat
aaccagaagggggtggaggaagccctagaaagcctaaaaaacgggaagctggatgccttc
atctatgatgctgctgttttgaactacatggctgggaaagatgagggctgcaagctggtg
accattggcagcgggaaagtgttcgccaccacaggatatggtatcgctctgcagaaggac
tcccgctggaaaaggcctattgacctggcactgctgcagttcctcggagatggagacacc
cagcgcctggagacagtgtggctatcgggcatctgccagaacgagaagaatgaagtgatg
agcagcaagctggacatcgacaacatggcgggagtcttctacatgctgcttgtggccatg
ggcctcagcctgctggtctttgcctgggaacacctgctctactggaaactacgacactcc
ctccacaagtctcacaaacttgacttcctgttggccatcagtaggggtatttacagttgt
ttcaatggagtggaggatcctgggcgttcatctggtttggccaaacctgacctgacttct
aactatgctcaagcaaacatgctgaagatgcttcgcactgccaaggacctggtctccact
gccaatgttgagagctccctggacaacgccaccaagaccatagagcagttgagccgtcat
ggcggcagcttgcctgttcgtgttccacaagtcaccacggaggctgcacctggaggattt
gcttatgttacagagaatcactcctccctcccccagcactccctgaccccacctatgact
gctgttaacgctctgaaacagcagaggggtgtgaccaggcccacgccgctccgttacacg
ctcccgactcgctcttcttcatgtctgtatgaccgtccacttcctgtatccagcctcagt
agcccccacctggctgtgagtgagccactcccttatcagcacccacaccactaccagacc
actgggagactttacgtagacacccatcctcattcgcctttcgtcccctatgctgatctc
caactacctgacatctacacctctcacccggtctcctcgcctcaaaaccagcacgtccaa
gcgggcttctcccgacggaaaaggaggtccaaaagtttccagtgtgaggacggggatgtg
gagaggagacaacacagagaccaggaaaagaatggcaaaagtcccgtctgtctcagtgag
ctgaaagccaaccacctccaagacaaccacatctctgcccccagtgttgagagcacctac
tcaggggagggtcctcgggtagagaactacagctcctggccaccagaagaccttgtgctg
agagggagacgcaggcaccgccgcccctctttccttaaagcgacttggggcagcgagcag
atccgccagctcgacgaatcccagtcatccctgtccagccaatccccttccaccctgcca
gacctattcccatgcattcttacaccgacaacacctgccaaggcctacaaccctgcccac
cttcgaaacaacctgtgcctcccacggaaccaggcctacctccacataagggaggaccag
aggaggcccaatggccgtaagggccagaggctgcgctactcccactccacccatctcccc
acatatggagaagcagtgcgacatgggactgggttagggcgggggatggtacggagagcc
accagtttgctcagcagacagtacgcccactacctgaactcatatccaggactacccctc
taccacggtcccctggacctgcagcaccacagccaggcctccaacggccatccaagcccc
agcccagtctgccagcttctggcctgtggtggcgggcgatgtgggggccagcgtgcgctg
ctctaccaggacagtgtgtatggggcctatggggtctatcaggggtcccagactggatca
gagacccaggcatgtcagggagcagggagccagcatgcagggagcccctgtgttcttcgt
ccctggcgacgggtgtccagcctggagtctgaggtctga
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