Xiphias gladius (swordfish): 120794757
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Entry
120794757 CDS
T07311
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03420
Nucleotide excision repair
xgl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
120794757 (ercc4)
03460 Fanconi anemia pathway
120794757 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xgl03032
]
120794757 (ercc4)
03400 DNA repair and recombination proteins [BR:
xgl03400
]
120794757 (ercc4)
DNA replication proteins [BR:
xgl03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
120794757 (ercc4)
DNA repair and recombination proteins [BR:
xgl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
120794757 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Motif
Other DBs
NCBI-GeneID:
120794757
NCBI-ProteinID:
XP_039991983
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Position
LG9:16359079..16368956
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AA seq
901 aa
AA seq
DB search
MAAPPLLEFETEMFLNLFGCDGLLVAAEGMGIDRVLLQFMRVYSEQGSLVLLLNTTTPEQ
EYLTEQLRVEGVTHLPRTVTSDVLSAERYNVYTEGGVLFVTSRILVVDFLTDRIPAHLIS
GILVYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKATAFSSGFCQVERVMRNLFVKK
LYLWPRFQASVNTALDRHKPEVVELHVSLTPAMRAIQSSILDIMSACLKELKRYNPSLEA
EDLSLENTLGNAFEKTIRHYLDPLWHQLGAKTKALVQDLKVLRVLLLYLTQYDCVTFLNL
LESLRSSQKIFGSNSGWLFLDSSTSMFVNARSRVYRITESKKKLKVGAEAEKPKLSSASG
VKRDLVLEKSPKWEALTEVLQEIERENKSSQHEPGHVLICASDDRTCAQLQQYIRHGSDR
LLNGLYARTIGKRDSAAAAAFELDSQKKDKGRPKKGAKGKEPAQKKTTKPSKSKSRPSLT
LTQMVGKEETDEAAVMGSSGDEDELMEENGDEEEQLKLDLSSSAYYGVLKEPLTVIHPLK
GCTDPHSLTRVLHEVEPSFVVLYDAEVSFVRQLEIYKASRPGKPLRVYFLIYGGSTEEQK
YLTALSKEKKAFEHLIREKATMVIPEEREGREDTNLDLARNLDPANATTNSRKAGGQEQP
KEPSRVIVDMREFRSELPSLLHRRGLDIEPITLEVGDYILTPDTCVERKSVSDLIGSLQS
GRLYTQCLSMTRYYRKPALLIEFDPAKPFSLMARSDFRHEISSNDISSKLTLLTLHFPRL
RILWCPSPHVTADLFLELKQGRLEPDVAAAQAVTAESDMVAETAGLYNPGPYDFLLKMPG
VNAKNFTALIRNADSLADLAKLSQEKLAETLGNANNAKLLYEFLHNVADVPAPVQKAKQT
L
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgccgctgctggagttcgagaccgagatgtttctgaatctgttcggctgt
gacgggctgctggtggcggcggaggggatggggatcgaccgcgtcctgctgcagttcatg
cgggtttactcggagcagggcagcctggtcctcctgctcaacacaaccacacccgaacag
gagtatctcacggagcagttgcgagtggagggcgtgacccacctgcccaggacagtgacc
agcgatgtcctgagcgcggagcgttataatgtttacaccgagggaggagtgctgtttgtc
accagcagaatcctggtggtggacttccttaccgatcgcatcccggctcacctcatttca
ggcatcctggtgtatcgcgcccataaaatcatcgagtcatgtcaggaggctttcattctt
cgtctgttcagacagaagaacaagacaggcttcattaaggccttcactgacaaggccaca
gcattttcctcggggttctgccaggtggagcgagtgatgaggaacctcttcgtcaagaag
ctctatctgtggcccaggttccaagcatcagtaaacacagcactggataggcataagcca
gaggtggtggagctccatgtatcattgacaccagccatgagggccattcagagctccatc
ctggacattatgagtgcctgtctgaaggagctgaaacgctacaatcccagcctggaggct
gaggacctctcactggagaacacactaggaaatgcttttgaaaagaccatccgtcactac
ctggaccccctgtggcaccagctgggagccaagaccaaggccctggtccaagacctgaag
gtgctgagggttctcctactctacctcacccagtacgactgtgtcaccttcctcaatctg
ctcgagtcgctgcgctccagccaaaagatctttggctccaattccgggtggctgttcctg
gactccagcacgtccatgtttgtgaacgccaggagtcgagtgtaccgcatcactgagagc
aagaagaaactcaaagtgggagcagaggccgaaaaaccaaagttatcctctgcctcaggg
gtaaaacgagacctggtgctggagaagagcccaaagtgggaggctctgactgaggtgctg
caggagattgagagggaaaacaagagctctcaacatgaaccaggtcatgtgctgatctgt
gccagtgatgaccggacttgtgcccaactgcagcagtacatcaggcacggctcggatcgg
ctgctcaacggactatacgcccgcacaattggtaaacgggactccgctgcagctgctgcc
tttgaacttgactcacaaaaaaaggacaaaggacggcccaaaaaaggagccaaggggaag
gagcctgcacagaagaaaaccacaaagccctcgaagagtaaaagcagaccgtctctgacc
ctgacccagatggtcggaaaggaggagacagatgaagcagcagtgatgggcagcagcgga
gacgaggatgaactgatggaggagaatggagatgaggaagaacaactgaaactggatttg
tcatccagtgcttactacggtgtcctgaaggagccactgactgtcatccacccacttaaa
ggctgcactgacccccacagcttgacgcgcgtgctgcacgaggtggagcccagttttgtg
gtgctgtatgacgctgaagtaagttttgtacgacaactggagatctacaaagcaagccgg
cctggaaagccacttagggtgtatttcctcatctatggaggctcaacagaagaacagaag
tacctgacggcactgtctaaggagaagaaagcctttgaacacctcatcagggaaaaagct
actatggtcatcccagaggagagggagggacgtgaggacaccaacctggaccttgctaga
aatctagatcctgccaatgccaccaccaacagccgcaaagcaggaggccaggagcagccc
aaagagccctcacgagtcattgtggacatgcgtgagttccgaagtgaactcccctccttg
ctgcaccgccgtggactagacatcgagcccatcaccctagaagttggtgactatatcctg
accccggacacatgcgtggagcgcaagagcgtcagtgatctgattggctctttacagagc
ggccgtctctacacccagtgtctctccatgacccgctactacaggaaaccagcactgctc
attgagtttgacccagctaaaccattttctttaatggcccgatcagatttccgtcatgag
atatcatctaatgacatctcctcaaaactcaccttacttaccttgcatttccctcggctc
cgtatactctggtgcccctccccacacgtcacagctgacctcttcctggagctgaaacaa
ggccgcctcgaacccgatgttgcagctgctcaggcagtcacagctgagtcggacatggtg
gctgaaacagcaggcctctacaaccctggaccttatgacttcctgttaaaaatgcctggg
gtcaatgcaaaaaactttacggctctgataagaaatgcagacagcctggcagatctagcc
aaactaagtcaggaaaagctagcagaaacacttggaaatgctaacaatgctaagttgctg
tatgagtttctgcataatgttgctgatgttcctgctcctgtgcagaaggccaaacagaca
ttatag
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