Xiphias gladius (swordfish): 120794856
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Entry
120794856 CDS
T07311
Symbol
trim16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120794856 (trim16)
Enzymes [BR:
xgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120794856 (trim16)
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120794856 (trim16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
ANCHR-like_BBOX
PilJ
Gp13-like
Motif
Other DBs
NCBI-GeneID:
120794856
NCBI-ProteinID:
XP_039992181
LinkDB
All DBs
Position
LG9:complement(2744689..2752905)
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AA seq
640 aa
AA seq
DB search
MADPAAVAQQQLCAVCSGVLSGDEPAACDHSVCGSCLGDRSKGCPECPRSPDKPEPADGL
KQNGTEAEAPEINSKEEQNQDSKTAEEVKIQEDLKETEDLKKPEEERKESEPQTDEEVKN
GAKEEVKEGEVEEEPLGPDDVVCDSCIESPCRALKSCLTCLVSYCEAHLRPHLENPKFQN
HRLVEPLRDIERRTCESHKWPLEIFCCADACCVCQDCVTEDHRGHNTVPVVEARRQIERE
LREKQTEMVKTVTAAENAINKLQLNTVSIEQSVTEVRAVIESQFEELQALVERAKREVTE
ILEGEEKQALRQAEGIRVHLEQRCTELKKTQAQMEKLSRNKNDVDFLQEYSEWKKEATDI
TLPGVYIGLMDRMNSFSRVIVDSTQELCAMLVSSYIEKVKETCKNDQMGIKTTVHEIAAA
KQNMSIPDPETHADFLKYAAQVHFDADTAHRFLRLTEENRKVTNTTPWQHPYPDVPERFE
NWRQVLATESFYLGRQYFEVDISGEGTHIGLTYKSIDRKGNESNSCITGNNFSWCLQWNG
RTFSAWHSGVETPLNVAKFTRIGVYVDYTRGLLAFYGVEDTMMLIHEYKADFLEPLYPAF
WLSKKENIVALVAPGEPLRLKSPSPPTSPASGAVVSKTEE
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccagcggctgtagcccaacagcagctgtgtgctgtctgctcaggtgtgctg
agtggagacgagccggcggcctgtgatcactccgtttgtggctcctgcctgggggacaga
agtaaaggatgtcccgagtgtccgcggagtcctgacaagcccgaacctgccgacggcctc
aaacagaacggaacagaggctgaggctccggagattaacagcaaagaggagcaaaatcag
gactctaagacagcggaggaggtcaaaatccaagaggacctgaaggagactgaggacctg
aagaagccggaggaggagaggaaagaatcggaaccacagacggatgaagaggtgaaaaat
ggagccaaagaggaggtaaaagaaggggaggtggaggaggaacctttgggccccgacgac
gtggtgtgtgactcatgtatcgagagcccctgcagggccctcaagtcctgcctcacctgc
ctggtgtcgtactgcgaggcccacctccggcctcacctggagaacccgaagtttcagaac
caccggctggtggagccgctcagggacatcgagaggaggacctgcgagagccacaagtgg
cccctggagattttctgctgcgccgatgcctgctgcgtctgccaggactgtgtgacggag
gaccacaggggccacaacaccgtacctgtggtggaggctcgcaggcagatagagagggaa
ctgagagagaagcagactgagatggtgaagacggtgacagcagcagagaacgccatcaac
aaacttcaactaaacacagtatccattgagcaatcggtgactgaggtacgagcggtgatc
gagagccagtttgaggagctgcaagcgttggtggagagggccaagagggaggtcacggag
atcctggagggcgaggagaagcaggcgctgaggcaggccgagggcatccgggttcacctg
gagcagaggtgcacggagctgaagaagactcaggcgcagatggagaagctctccagaaac
aagaatgatgtggatttcttacaggagtattcagagtggaagaaagaagccaccgatatt
actctgcccggggtctacatcggcctgatggatcgaatgaattccttcagccgcgtgatc
gtcgactccacgcaggagctctgtgccatgctcgtgtcttcatacatagaaaaggttaaa
gagacatgcaagaatgaccaaatgggaataaagacaacggttcatgaaattgctgcggcg
aaacagaacatgtcgataccagacccagagacacacgctgacttcctcaagtatgccgcc
caggtgcatttcgacgccgacacagctcacaggttcctgcgtctgacagaagagaacagg
aaggtgaccaacaccacaccctggcagcatccttatcccgatgtgcccgagcggtttgag
aactggcggcaagttctggccacggagagcttctacctgggccggcagtactttgaggta
gacatcagcggcgagggcacacacatcggtctgacctacaagagcatcgatcgcaaaggc
aacgagagcaacagctgcatcacgggaaacaacttctcctggtgtcttcagtggaacgga
cgcaccttctccgcctggcacagcggcgttgaaacccctctcaacgtggccaagttcacc
cgtatcggggtgtacgtggactacacgcggggcctcctggctttctacggtgtggaggac
accatgatgctcatccacgagtacaaggcagacttcctggagcctctctacccggctttc
tggttgtccaagaaggagaatatcgtggccttggtggcgcccggagaaccactgcggctc
aaaagcccctctcctcctacctcacctgcaagcggagctgtcgtttcaaaaacagaagaa
tag
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integrated database retrieval system
