Xiphias gladius (swordfish): 120794942
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Entry
120794942 CDS
T07311
Name
(RefSeq) homeobox protein six1b
KO
K15614
homeobox protein SIX1
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120794942
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
120794942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
Rrn6_K-rich
YdaS_toxin
Phage_mat-A
HTH_72
Motif
Other DBs
NCBI-GeneID:
120794942
NCBI-ProteinID:
XP_039992275
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Position
LG10:complement(13460829..13462525)
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AA seq
284 aa
AA seq
DB search
MSILPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENSENNNAGGNKQNQLSPLDGGKSLMSSSEDEFSPPQSPDQNSALLLQGNMSH
PVASAYPMSGLGAPQPVHGMHGHPHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtctatattgccttccttcgggttcacgcaggagcaagtggcgtgcgtttgcgaggtg
ttgcagcagggaggaaacttggagaggctcggccgcttcctgtggtccctgcccgcttgc
gatcacctccacaagaacgagagcgtgctcaaagccaaggcggtggtggccttccaccgg
gggaacttcagggagctctacaagatcctggagagccaccagttttctccgcacaaccac
ccgaagctgcagcagctctggctgaaggcgcactacgtggaggcggagaaactgcgcggc
cggccgctcggagccgtggggaagtaccgggtgcggaggaaattcccgctgccccgcacg
atatgggacggcgaggagaccagctactgctttaaggagaagtccaggggagtactgcga
gagtggtacacgcacaacccgtacccgtccccgcgggaaaagagagagctggccgaggcc
acaggactgaccaccacgcaggtcagcaactggttcaaaaacagacggcagagggacaga
gccgcagaggcgaaggagagagagaacagtgaaaacaacaacgcaggcggcaacaaacag
aaccagctgtcgccgctggacggaggaaagtccctcatgtccagctcggaggacgagttt
tctccacctcagagccccgaccagaactcagcgcttttgctccagggcaacatgagccac
cccgtggcctccgcttaccccatgtccggcctgggggccccacagccggtgcacggcatg
cacggacacccgcaccaactgcaggactccttgttgggacctctaacctccagtcttgtg
gatttgggctcttaa
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