Xiphias gladius (swordfish): 120795107
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Entry
120795107 CDS
T07311
Symbol
copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120795107 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xgl04147
]
120795107 (copb1)
Membrane trafficking [BR:
xgl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
120795107 (copb1)
Exosome [BR:
xgl04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120795107 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT_2
HEAT
Cnd1
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
120795107
NCBI-ProteinID:
XP_039992630
LinkDB
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Position
LG1:complement(20635547..20648778)
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AA seq
953 aa
AA seq
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MTAAENVCYTLINVPSDSEPPSEVTLKADLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDNLRPLIIEKMLEVFHAIKTVKIYRGALWILGEYCSTKDDIQSVMTEVR
RSLGEIPIVENEIKKETGEVKPEDEVSAAPAQKLVTEMGTYVTQSALSSSRPSKKDEDRP
PLRGFLMDGDFYVAASLATTLTKVALRYVAIVQDKKKQNSFVAEAMLIMVTVLHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRKSLSHMLTVRLEEEKLSQKKESEK
RNVTVQADDPISFMQLTAKNEMTSKEDQFQLSLLAAMGNTQRKEAADPLSSKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNITDLNEYLQHILKSTNMKCLTPEKALSGFCGFMAANLYARSI
FGEDALANVSIEKPIHLGPEAPVNGHIRIRAKSQGMALSLGDKINLSQKKTNV
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgcagagaacgtttgttacactctgatcaatgttccatctgactcagagccc
ccttccgaagtcaccctaaaagcggatctagaaaagggggagatcaaagcaaagaccgag
gccctgaagaaggtcatcatcatgatcctgaacggtgagaagttgccaggactgctgatg
accatcatccgcttcgtcctcccacttcaagaccacacaatcaagaagctactgctggtt
ttctgggagattgtccccaaaacaactccagatggcaagcttcttcaggagatgatcctg
gtctgtgatgcctacagaaaggacctgcagcatcccaatgaattcattcgtggctccact
ctgcgtttcctgtgcaagctgaaggagtctgagttgcttgagcccctcatgccagcgatc
cgggcctgcctggagcaccgtcacagctatgtgcgccgcaatgccgtcctggccatttac
accatctataggaactttgaacatctcatcccagatgctccagagttgatccatgatttt
cttgtcaatgagaaagatgccagctgtaagagaaatgctttcatgatgctgattcatgca
gatcaggatcgagctctggattacctcagcacatgtattgaccaagtgcacacttttggt
gacattctccagctggtcattgtggagctgatttacaaagtttgccacgctaacccgtct
gagcgtgcccggtttatccgctgcatctacaacctgcttcagtcctccagcccggctgtt
aagtatgaggctgccggcactcttgtaaccctctccagtgctcccacggccattaaggct
gctgcccagtgctacattgatttgattatcaaggagagcgacaacaatgtgaagctgatt
gttcttgatcgtctgattgaactgaaggagcatcccactcacgagcgtgtactccaggac
cttgtgatggacatcctgcgtgttctcagcactcctgacctggaagtcagaaagaagacc
ttgcagctggcactggaccttgtttcatctcgcaatgtagaagagttggtgattgttttg
aagaaagaggtgatcaagacaaataacgtaacggaacatgaagacactgataagtacagg
cagctgttggtgcgcactctccactcttgtagtgtgcgcttccctgacatggcggccaat
gtcatacctgtgctgatggaattcttaagtgacactaatgaggcagctgctgctgatgtg
ctggagtttgtacgggaggccattcagagatttgacaacttgagacccctcatcatcgag
aagatgctggaagtctttcacgccatcaaaactgtcaagatctacaggggtgcgctgtgg
atcttgggagaatattgcagcaccaaggatgacatccagagtgtgatgacagaagtacgc
aggtccttgggagagatcccgattgtagaaaatgagataaagaaagagacaggagaggtg
aagccagaggatgaagtgagtgcagctccagcccagaagctggtgacagagatgggcacg
tatgtgacacagagtgccctcagctcctccaggccttcgaagaaagatgaagatagacct
ccacttagaggcttcctgatggatggagacttttatgtcgcagcatccctggccaccaca
cttaccaaagtggccttgcgctatgttgctatcgttcaagacaaaaagaaacaaaattcg
tttgttgcagaggccatgctgatcatggtcactgtgctgcacctgggcaagtcttctctg
cccaagaagccaattacagacgatgatgtggaccgcatctcgctgtgccttaaggtcctg
tcagagtgctcaccacttatgaatgacattttcaacaaggagtgccgaaaatccctgtca
cacatgctgactgtcagactggaggaagagaagctgtcacagaagaaagagtctgagaaa
cgtaatgtaacagtgcaggcagacgaccccatctccttcatgcagctgacagccaaaaat
gagatgacttctaaggaggaccagttccagctcagtctactggctgctatgggcaacact
cagaggaaggaggccgctgatcccctctcttcaaaactcaacaaggtgactcagctgacg
ggcttctcagacccagtgtatgctgaagcctatgttcacgtcaaccagtatgacattgtg
ttggacgtgctggtggtcaaccaaaccagcgatactctccagaattgcacccttgagcta
gccactttaggtgatctcaagttggttgagaaaccttcccctctaactctggctcctcac
gattttgctaacatcaaggccaatgtcaaggtggcctctactgagaatggcattatattc
ggcaacatagtgtacgatgtttcgggagctgctagcgacagaaactgcgtcgtcctcagt
gacatccacattgacatcatggactacatccagccagcctcctgcacagatgcagaattc
agacagatgtgggcagagtttgagtgggaaaacaaggtgacagtgaacaccaatatcact
gatctgaacgaatacctccagcacatcctcaagtccaccaacatgaagtgtctgactcct
gagaaggcactgtctggcttctgtggcttcatggcagccaacctttatgcccgttctatc
tttggagaagatgccctggctaatgtcagcatcgagaagcccatccacctggggcctgag
gcgcctgtcaacggacacatccgcattagagccaaaagtcaggggatggccttgagcctc
ggtgacaagatcaacctctcccaaaaaaagacaaatgtctga
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