Xiphias gladius (swordfish): 120795123
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Entry
120795123 CDS
T07311
Symbol
tdrd9
Name
(RefSeq) ATP-dependent RNA helicase TDRD9
KO
K18408
ATP-dependent RNA helicase TDRD9 [EC:
5.6.2.5
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xgl03036
]
120795123 (tdrd9)
Enzymes [BR:
xgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
120795123 (tdrd9)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Gene silencing
piRNA pathway
120795123 (tdrd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
Helicase_C
HA2_C
HA2_N
nSTAND3
AAA_14
ResIII
Herpes_ori_bp
AAA_22
PhoH
AAA_19
T2SSE
AAA_7
Motif
Other DBs
NCBI-GeneID:
120795123
NCBI-ProteinID:
XP_039992620
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All DBs
Position
LG10:13316599..13336591
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AA seq
1335 aa
AA seq
DB search
MDKAFTAEQISDWFTSGATFANIKLREEAVERKFDETASKETRPSEVLDEGSLKNVNSDG
GRKKQESAGSTAPPPLASYEYPSLPITKNRQELISLIENNSVVIIRGATGSGKTTQLPQY
ILDHYNEKNASCNIVVTQPRKIGATSIARWVATQRKCTLGSLVGYQVGLEKMATEHTRLI
YMTTGVLLQKLVSAKCLTEYSHIFLDEVHERTEEMDFLLLVLRKLLHSNSRYVKIILMSA
TINCRQFAEYFGTPVRGKMNPAYVFEVEGVPYAIEEFYLDDIHNLFPKRVESPHPDDPHI
SIEMYNLAISLIQSFDEMEGRDSSKAEKEVGMTSSERGSVLVFLPGIHEISYMQEALAKL
VHKRLQVYPLHSTVTLEEQNGVFLPPVPGYRKVILSTNIAESSVTVLDVKYVIDFCLARH
LVCDQDTNYQSLRLTWASKTNCNQRRGRAGRVSKGYCYRLVTKEFWRNEIPDYMIPEMLL
APLASIMLKVKLLDLGDPRSILSTALSPPNLGDIVRTVLQLKEMGALSVKSDDRGQNEDG
ELTFLGRVLAHLPVDLYLGKMIVLGHVFGCLDECLIIVASHSLKSFFAIPSMQQLAGHRS
KLAFARGTPSDSIAFVNAFKAWHSSKKRGQLRHPKDELDWGKENFIQIKRIREVAELYED
LKRRVSQFNMNVPDNIQPSDYTSIHRQKFILQVVIAGAYYPNYFVQGEIDEDLASRELSG
FNPRTTVMVRNLPPYSFLYYKQLQSLFRLCGQVKAISFESSRAYVEFYRTCQESGVLPEV
SLALLLAQQSPPMELSVYSIEQIEKCAGNRNITHMKYSRVNVDFQSQSVCPVGVVSSTID
PDKLPPNHLFVVNITEVVEVGHFWGFQADEASLEKQRHLTADINMRTLHPVTVSLYPNLL
CLAPYSEINEQCLYYRAKILHMRGNTVEVVFLDFGNTAVVACSSLRELPSDLLSHPFQAQ
EFQVSGMRPSAQSIILGNQWSSRARDRFITLVKGKSLIVSLYSILHNVMRVQVLINTETT
NTSVVDILVEEGHAVKADESFDSKQNHEALMSLYKDIETGTYVPNTASSSWKDRKKEEKD
LIDNLLAHFSKSSQSFSKSKVRLHGPNSPHKINFHSLSHKTYYKTVCIDRSSINSLSLNE
NPHYKHQRMLVTGTVSVNSTGTRILLRDTSIMPDLPGLPALVTMLFTPIMELRTNQERTC
YTGALCGLGWNSQTQEGILPEHDTELAFDVKFDVEDITEINALRVAINRLLCDGPSGTLH
LGPDRISHLQSDCRDRLMRLFTKSPPRKAVTPVYYEKLEKWNQVDPSLRMDIMEPGGGKT
RGVLFQLHPVTLLNT
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagcgttcaccgcagaacagatttcggactggttcacctcgggggccacgttt
gctaacattaagctcagagaagaagcggttgaaagaaagtttgatgaaacagcgtcgaaa
gagaccagaccatcagaggttcttgatgagggcagcctgaagaatgtgaactctgatgga
gggagaaaaaaacaggaatctgcagggagtactgctcctcctccacttgccagctatgag
taccccagcttgcccataaccaaaaacagacaggagctgatttccctcatagaaaacaac
tctgtagtgattattcgaggagccacaggcagtggcaagaccacccagctgccacaatat
attctggaccactacaatgagaaaaatgcctcgtgcaacatcgttgtcacccaaccacgc
aaaattggggccaccagtattgctcgatgggttgccacacagcggaagtgtaccctgggt
agtcttgttggatatcaggttggactggagaagatggctactgagcacacccgactaatc
tacatgactacaggagtgctgctgcaaaaactggtttcagccaagtgcctcacagagtac
tcccacatcttcctagatgaggttcacgagcgcactgaggagatggactttctcttactg
gttttgagaaaactccttcattccaactctcgttatgtcaagatcatcctcatgtcagcc
accattaactgcagacagtttgctgagtactttggcacaccagttcggggcaagatgaac
ccagcctacgtgtttgaagtggaaggcgtaccctatgccattgaggagttttatctggat
gacattcacaacctgtttccaaagagggttgagtcacctcatccagatgaccctcatatc
tcaatagagatgtacaatcttgccatcagtctcatccagagctttgatgagatggagggc
agagattccagcaaagctgagaaagaagttggcatgacttcgtcagagagaggcagtgtg
ctggttttccttcctggtatacacgagataagctacatgcaggaggccttggccaagctg
gtccacaaaaggttgcaggtttatcctctccactccactgtgacccttgaggagcaaaac
ggtgtgtttctgccccctgtccctggatacaggaaggtcatcctctccaccaacatcgct
gagagttcagtgactgttctggatgtcaaatatgtgattgacttctgcttggcccgtcac
ttggtctgtgaccaagataccaattatcagtctctgcgtctcacctgggcatccaaaacc
aactgcaaccagcgcaggggaagggcaggacgagtatctaagggctactgttaccgactt
gtcactaaagagttctggaggaatgaaatcccagactacatgatccctgagatgctgctt
gcccccttggcctccatcatgctgaaggtgaagctgctggacttgggagatccccgctcc
atcctctcaacagccctctcaccccccaaccttggagacatagtgagaaccgtgctccaa
ctcaaagagatgggcgcactgtctgtgaaaagtgatgacaggggtcaaaatgaagatggc
gagctaacgtttttgggtcgagtgctggcccacttgcctgtggacctgtacctggggaag
atgattgtcctgggccacgtctttggctgcctggacgagtgcctcatcatagttgcctcg
cactctctgaagagtttttttgccataccatccatgcagcagcttgctggccacaggagc
aagttggcctttgcccgtggcacaccaagtgattcaatagcatttgtcaatgccttcaag
gcatggcactcatccaaaaagagaggacagctgagacacccaaaggacgagctggactgg
ggaaaagagaacttcattcagatcaagaggatcagggaggttgcagagctgtatgaggac
ctgaagagacgtgtgtcccagttcaacatgaatgtgccagacaatattcaaccatctgac
tacaccagcatacacaggcagaagttcattcttcaggtggtcattgctggtgcctattac
ccaaactactttgtacaaggggaaatagatgaagacctggcctccagagaattaagtggc
ttcaacccaagaacgacagtgatggtgaggaacctccctccgtacagtttcctgtactac
aagcagctgcagtctctgttccgcctgtgtggacaggtcaaagccatttcctttgagagc
tctagagcgtacgtggagttctacaggacatgtcaagaatcgggggtgctgcctgaggtt
tcccttgccctcctcctggcccagcagagtcctcccatggagctgtctgtttactccatt
gaacaaatagaaaaatgtgctgggaacagaaacataactcacatgaaatattcacgagtg
aatgtagatttccagagccagtcagtctgcccagtgggagtggtgagcagcactattgac
ccagacaagctcccccccaaccacttgtttgtggtcaacatcacagaggtggtggaggtg
ggacatttctgggggttccaggcagatgaagccagcttggagaagcagcgccatctgact
gccgatattaacatgcgtacactgcatcctgtaactgtatcactctaccccaacctgctg
tgtctggctccgtactctgagatcaatgagcagtgcttgtactaccgcgccaaaatcctg
cacatgcgtggcaatacagtggaggtagtgttcttggactttggcaacacagcggttgtt
gcctgcagcagcctcagagagctcccttctgacctcctgtctcaccctttccaggctcag
gagttccaagttagtggaatgcgtccttcagcccagtccatcatcctggggaaccagtgg
agcagccgagcccgcgaccgcttcatcacactcgtgaagggcaagtcactcattgtgtcg
ctgtactctatcctccacaatgtcatgcgtgttcaggtgctcatcaacacagagacaaca
aacaccagcgtggtagacatcttggtggaggaaggacatgcagtgaaggcagacgagagc
tttgattccaagcaaaaccatgaggcgctgatgtccctgtacaaggacatagaaactggt
acatatgtccccaacactgccagcagctcctggaaggatcgcaagaaagaggagaaggat
ctcattgataacctgcttgctcacttttccaagagcagccagtccttttccaagtcaaag
gttcgtctgcatggaccaaacagtcctcacaagataaacttccacagcttgagccacaaa
acttactacaagacagtgtgtatagacaggagcagcatcaactccctgagcctgaatgaa
aaccctcactacaaacatcagaggatgctggtgaccgggactgtgtcagtcaactccaca
ggtacacgcattctcctgagagatacctccatcatgccagacctacccggactgccggct
cttgttaccatgctcttcacccccatcatggagttacgcactaatcaagagaggacctgc
tacactggtgccctttgtggactgggttggaacagtcaaacacaagagggcatcctacca
gagcacgacactgaactcgcctttgacgtcaaatttgatgttgaggacatcactgagata
aatgcgttacgagtggctataaaccgtctgctgtgcgatgggcccagcggaactctgcat
ctggggcctgacaggatcagtcacctgcagtcggactgtcgagaccgcctcatgagactg
ttcaccaagtcacccccaaggaaagctgtcactccagtgtactacgagaaactggagaaa
tggaaccaggtggatccctctctgaggatggatatcatggagcctggaggtggaaagacg
agaggtgttctcttccagctacatcctgtcactctcctcaacacttaa
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