Xiphias gladius (swordfish): 120795403
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Entry
120795403 CDS
T07311
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03013
Nucleocytoplasmic transport
xgl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120795403 (srrm1)
03015 mRNA surveillance pathway
120795403 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120795403 (srrm1)
03041 Spliceosome [BR:
xgl03041
]
120795403 (srrm1)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120795403 (srrm1)
Spliceosome [BR:
xgl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
120795403 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
120795403
NCBI-ProteinID:
XP_039993257
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Position
LG10:complement(9090964..9101269)
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AA seq
861 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKHKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKHPDSKMMQINLTGFLNGKNAREFMKDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKVDEDKKDKDTRERAQSKSPRRRKTRSPSPRRRSP
VKRERKRSPSRSPRRKPSPVGGSSPPPPLMQLPTKPLEQLAEPDTSGRAMLEPVVQEASS
TCDTVVEVVKADSVMEVKEPSPEKTHKKEERPRSREREKDNRRERPHHRSRSHSRSRRRR
SRSRSYSPRRRQSPRRRMSPRRRSPPRRGPTSSRHRHRRSPLRRRRSRSASSSGSSSSGS
CSPKKAMKRISSTPPRKQAHHPDNSISPAGKDRRSPSPRARRGRGSASPPRSSGLKRKSG
GRGDSTSDNAKPRHSEVSDSEEDKNEKGATADSVQQRRQYRRQNRQSSSDTGSSSSEDEG
PKRPTAGPGARNGEVRRRRSRTPSPRRRHRDASPRKRRSPSPGRRRRSTSPPRRRRSPSP
PRRRSPSPPLRRRSPSPRRYSPPIQRRYSPSPLPPQKRKMSSSPAKRSSPGAKRRPSRSP
RRRSSPAPRRRTPPSSSPPPRHRRSPMLPSGWQSRDTRSPAGAASRLSPSPVNRSRTLRS
PPSSQGRFETSSTSPSNQRRQQSPSHSGKPIRRVSRTPEPRSNQRPSLSPQPMRRASSRS
RSVSPQPAAQKRPAPASASPSPPRSASGSPPPAKKASSGSISQSPSKNSDVEGSGKKKKK
KKEKKHKKEKKHKKHKKHKKEKSGATGSGDGQENQGVEEDGDSRKESDSEVEDSLDDLEK
HLREKALRSMRKAQMSPSQMS
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggcacaagtgcggagcaagataaccgtttcagcaacaag
cacaagaaactgctgaagcagctgaaatttgcagaatgtctggacaagaaggtggacatg
accaaagtgaacctggaagtcatcaaaccttggattactcaacgagtgacagagattctg
gggttcgaggatgacgtcgtcatagagttcatatttaaccagcttgaagaaaagcacccg
gatagcaagatgatgcagatcaacctgacaggcttcctgaatgggaagaatgcgcgggag
ttcatgaaggacctgtggcccctgttgttgagtgcccaggagaacattgctggcatcccc
tctgcttttctggaacagaagaaagaagaaatcaaacagagacagattgaacaggagaag
ctagcttctcttaagaaggtggatgaggataagaaggacaaggacaccagagagagggct
caatcaaaaagcccaaggaggcggaagacaaggtcgccatcaccacggcgaaggtcgcca
gtgaagcgtgaaaggaaacgaagcccgtcgcgctccccaaggcgcaaacccagcccagtt
ggtggcagttcaccccctccacccctgatgcagctgcccacgaaacctttggagcagctt
gcagagccagatacatcaggaagagccatgctagaaccagtggtccaagaagcttcttcc
acctgtgacacagttgtggaggtagtgaaagcagactccgtgatggaagtcaaagaaccc
tccccagagaaaactcataagaaggaggaacgacccaggtctcgagagagggagaaggac
aacaggagggaaaggcctcaccaccgctcccgttctcattcccgttctcgcaggcgacgc
tcccgttctagatcttactcccctcgtagaaggcagagtcccaggaggagaatgtctcct
cgtcgaaggagtccccctcgacgtggtcccacgagctccaggcacagacacaggcgctcc
ccgctccgcaggaggcgctctcgctctgcttcatcctctggcagcagctcctcaggctct
tgctcccctaaaaaagcaatgaaaagaatatctagcacaccacctcgaaaacaggcccat
catccagacaactccattagtcccgcagggaaggacaggcggtcaccgtctcccagggct
agaagaggccggggctcagcttccccacccagatcatctggtttaaagcgaaaatcagga
ggaagaggggattctacgtctgataatgccaagcccagacattctgaagtgtctgactca
gaggaggataaaaatgagaaaggggcaacagcagattcggtgcagcagcgacgtcagtat
cgcaggcagaatcgacagtcgtcttcagacacagggtcttcttcctcagaagatgagggg
ccaaagaggccaacagcagggccaggtgccagaaatggtgaagtcaggaggagacgaagc
cgtacgccttccccacggaggcgacacagggatgcctctcccaggaaaagacgttctcca
tcccccggacgcagacgtcgctccacttctcccccacgacgtcgcagatctccctctcct
cctagacgcaggtctccttccccacctctccgtcgacgatctccatcccccagacggtat
tctcccccgatccagcgtcgctacagcccctcacctttgcctcctcagaaaaggaaaatg
tctagctctcccgcaaaacgctcttctccaggggccaagcgacgtccttccaggtccccc
aggcgcagaagttctcctgctccaaggagacgcacacctccatcctcctcaccaccaccc
aggcacaggaggagccccatgttgccttctggctggcaaagcagggacacacgatcccca
gctggagcagccagccgcctgtccccatcccctgtaaaccgcagtcgcactcttaggagt
cccccaagttcccagggacgttttgaaacctccagcacatctccatctaaccagcggaga
caacagtccccgtcacacagtggcaaacccatccgaagagtgtcccgtaccccagagcca
cgcagcaaccagagaccctctctgagcccccagcctatgaggagagcatcttccagatca
agatctgtatcccctcaaccagcagctcagaaacgcccagcccctgcatctgcctccccc
tcaccgcctcgctctgccagtgggtccccaccaccagccaaaaaggccagcagtggttcc
atcagtcagtccccaagcaagaactctgatgttgaaggcagtggtaagaaaaagaagaaa
aagaaggaaaagaaacataagaaagagaagaaacataagaagcacaagaagcataagaag
gagaagagtggtgctactggaagtggagatggacaagaaaaccagggtgtggaggaggat
ggagattcaagaaaggaatcagacagtgaagtagaggacagcttggacgacctagagaag
cacctaagagagaaggctctgcgctccatgaggaaggcccagatgtctccatcacagatg
tcctga
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