Xiphias gladius (swordfish): 120795443
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Entry
120795443 CDS
T07311
Symbol
shprh
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH isoform X1
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120795443 (shprh)
Enzymes [BR:
xgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120795443 (shprh)
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120795443 (shprh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
zf-C3HC4
PHD
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
TPR_10
Motif
Other DBs
NCBI-GeneID:
120795443
NCBI-ProteinID:
XP_039993312
LinkDB
All DBs
Position
LG10:complement(20700328..20716968)
Genome browser
AA seq
1663 aa
AA seq
DB search
MSSRRKRAPPVRVDEEAKKRLNWNMLDDRKNEVIQEDGGQTPTCSLLQVDPAPSGSFLSA
TEDITEASSTRSVRFTEELPGTSSEGTAASASLALTVVPASKLGHIWKALIGEFSVRPAW
LPCDCEQKAFTLHRMGDQLCLSYSSCDESPGLQWKPDRDTCTAEFSLSRIPLEDLDWLQK
RRVMQLCHQAKEESIKVGIYLLETGLGKPEFLSEGNSRLKKANQVMQKLMEYFYDFIIPE
VVENEEEECDTDLERQNVEELYDYVRHLHQRETKEVTYDVQHKALIPVLRPYQSQAVNWM
LKREKYRNTSQKEQSLHSLWRELVTLCGKKLFYNPFTGCLIREFPLAGFEWPGGILADEM
GLGKTVEVLALILFHNRQDLEQEALTLPVGKSVNYFVPPPPLERKKVIRCKSEAQPKMKM
SYPTVRVMLLTAIKEMRSGKGASVNAIFTYIRATYGYDLLKNRNHIRKTLVKLIDEGLVD
RVKGRGLAGSFKLGKNYKETKKTLAGASKSSSKSTEGSPRKMFQRRAKEKAEAALQNSLT
EDQRDLSPPTFDCPVPEESEMKKEWGESLNEKADQSDNTLDTSRASSQMSQDKSESDTED
VPRMDDLPEERGEAPQHDSQEETETPTRASVVPFNTPDYRFECICGELGIIDYKARVQCM
NCQLWQHADCVNYKEESLETTPFYCPHCLVAMKPVSTGATLIISPSSICHQWVEEINRHI
RSSSLRVLVYHGVKKHGFIQPHMLAEQDVVITTYDVLRSELNYVDIPHSNSKDGRRFRNQ
KRYMAVPSPLVAVEWWRICLDEAQMVECPTAKAAEMALRLASVNRWCVSGTPVQRGLEDL
YGLILFLGVDPYWVKHWWDQLLYRPYRHGNTDPLYNVIGQLLWRSAKKDVIDQIQIPPQT
EEVHWLHFSPVEGHFYHRQHEVCSQDALVKLRKISDWSLKLGSLDRRTVNTILCPLLRLR
QACCHPQAVRGEFLPLQKSTMTMEELLKSLQKKCRVECEEAHRQLVCALNGLAGIHIIRD
EFVEATEMYREVLRSSEEHKDRLKTDSLQRLHATHNLMELLSAKHPGIPPTLRDDRLSEE
AEQLRQHYMTKYDSEVADAHQALQPVLQNIKDLKRKVKLNSPWWLDVIQRAIRCSNDDDL
VSRIKNELTSSYKQQASKLSMADKFRDAFGMQYLLTTQMQDLIKSQKTVQDAVKSLEGPA
SQKVIDEVTICHLRPMRLPLNNCVFCKADELFVDYESKLFSHTVKGQTAIFEEMIEDEEG
LVDDRLPTTSRGLWAASETERTLKAILSFAKSKRMDPELVEEGNTFMELFENWKKEYKVL
HEYWMVLRNHVSAIDELGMATERLRVRLPDEPKPKLLHIIEPHEVEQNRVKLLNDQAVAK
SQLQKKLGQFLYLTNLEKSQDKSTGGLNPEPCPICARPLGQEWAVLTCGHCFCNECIAII
VEQYSVGSRRRAIKCAICRQTTSHTEISYVFTTQSSSQDQDIPVKGSHSTKVEAVVRTLK
KIQVTDPGAKCLVFSTWQSVLDIIAKALFDNNMEFSQINGIHKFQENLSSFKYEEKINIL
LLPLHTGSNGLNIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKPTFVHRFLIKSTIEE
RMQAMLKTAEKSHTSTAMKHSEAAVLTVADLADLFTDDTESLE
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccgaagaaagagggccccccctgtgagggtcgatgaagaagccaagaagagg
ttgaactggaacatgctggatgatcggaagaacgaggtgatccaggaggatggcggccag
acgccaacctgctcgcttcttcaagtcgaccccgctcccagcggctcctttctctcagcc
accgaggacatcacggaggcctccagtacccgctctgtccggttcacagaggaactccct
ggtacgtcgtcagagggcactgctgcctcagcctctctggcactgactgttgtgccggct
tcaaagctgggccacatctggaaggcactcattggggagttcagtgtccggccggcttgg
ctcccgtgtgattgcgaacagaaggcgttcacgctccacaggatgggggaccagctctgc
ctcagttacagcagctgtgacgagagcccaggactgcagtggaagcctgatcgggacact
tgcacggcggagttcagcctcagtcggatcccgctggaggacctcgactggctgcagaag
aggagggtgatgcagctctgccaccaggcaaaagaggagtcaatcaaggtggggatttac
ttgctggaaactgggctcgggaagcctgagttcctcagcgagggaaattcccggctgaag
aaagcaaatcaagtaatgcagaagttaatggagtatttctatgattttattatccctgaa
gttgtagaaaatgaggaggaggagtgtgacaccgacctggagaggcaaaatgtcgaggag
ctctacgattacgtcaggcatctgcaccagagagagaccaaggaagtgacctatgacgtc
cagcacaaggctcttattcctgtgctcagaccttatcagagccaggctgtcaactggatg
ctgaagagagaaaaatacaggaacacttcacagaaagaacaatctctgcattccctctgg
cgggagttggtcactttgtgtgggaagaagttgttctacaacccttttactggctgctta
attcgggaatttccactggccggcttcgagtggccaggtgggatcctggctgatgagatg
gggctcggaaagacggtggaagttctggctctcattttgtttcacaacaggcaagatctg
gaacaggaggcccttaccctgccggtgggaaaatctgtgaattactttgttcctcctcct
ccattagaaagaaagaaagtaatccgctgcaagtccgaagctcagcctaagatgaaaatg
tcttacccgactgtgcgtgtcatgctgctcactgcaataaaggaaatgagatctggcaaa
ggagcctcagttaacgctatcttcacttacatccgtgccacttacggttatgacctctta
aagaaccgtaaccatatcaggaagacgctggtaaagctcatagatgaaggcctggttgac
cgggtcaaaggtcgcggcttggcagggtcattcaagctgggaaagaactacaaagaaaca
aagaagacattagcaggagcatccaagtctagttcaaaaagcacagagggctcgccgcgg
aaaatgtttcagagacgagctaaagagaaggcagaagcagctcttcaaaactctcttaca
gaagatcaaagagatctcagccctcctacatttgactgtcccgtaccagaggaaagtgaa
atgaagaaggagtggggtgaaagtctgaatgagaaagcagatcagtcagataacacactg
gatacgtccagagcatcctcacagatgtctcaggataaaagtgagtcagatacagaggac
gtgcccagaatggacgatctacctgaagaaaggggagaagctcctcagcacgattcacag
gaggagacagaaacccccaccagagcatctgtggtccctttcaacaccccagactaccgc
tttgagtgcatctgtggtgaactgggcattattgactacaaggcccgtgtccagtgcatg
aactgccagctgtggcagcatgcagactgcgtaaactacaaagaggaaagccttgaaact
accccattctactgccctcactgcctggttgccatgaaacctgtctccactggtgccacc
ctcatcatctccccgagctctatctgccaccagtgggtggaggagatcaaccgacacatc
aggtcctcctcactccgagtgctggtttatcatggtgtgaagaaacacggattcatccag
ccacacatgctcgctgagcaggatgtggtcatcaccacctacgatgtgctgcggtcagag
ctcaactatgtcgacattccccacagtaacagcaaggatggacgccgcttccgcaaccag
aagcgctatatggccgttcccagtcctctggtagctgtggagtggtggcgcatctgtctg
gacgaggctcagatggttgagtgtccaactgcgaaggctgcagaaatggctctgcgtctt
gcgtctgtcaaccgctggtgtgtcagtggcacccctgtccagagaggcttggaagatctt
tatggccttatacttttcttgggagttgacccatactgggtgaaacactggtgggaccag
ctgctttatcgcccttatcgacatggaaacacagaccctctgtacaatgtcatcggtcag
ttattatggcgatcagctaaaaaagacgtcattgatcagatccagattccccctcagacg
gaggaggtgcactggctgcacttctcccccgttgagggtcacttctaccaccgtcagcat
gaggtctgctcccaggacgctctggtcaaactcaggaagatctccgactggagcctgaag
ctcggcagcctggaccgccgcaccgtcaacaccatcctgtgcccgctgctgaggctgcgc
caggcctgctgccatccacaggctgtgaggggggaattccttcctctgcagaaaagcacc
atgacgatggaggagctcctgaagtccctgcagaagaaatgtcgagtggagtgtgaagaa
gctcacagacaattggtgtgtgcgctcaatggcctggctggaattcacatcatcagagat
gagtttgtagaggcgacagagatgtatagggaagtgcttcgttcatcagaggagcacaaa
gacagattgaaaacagattcattacagagacttcatgctacccataatttgatggaactc
ctgagtgcaaagcatcctgggatacctcccacgctgagagatgaccgactaagtgaggag
gctgagcagctgcgacagcactacatgaccaaatatgactctgaggtggcagacgcccat
caggctctgcagccggtgttacagaacatcaaagacctaaaacgcaaagtcaagctgaac
tctccctggtggctggatgttattcagagagcaatccgctgctccaatgatgacgatctg
gtgtcccgcatcaagaatgagctgacatccagctacaaacagcaagccagcaagctctcc
atggctgacaagttccgtgatgcctttggtatgcagtacctgctcaccacgcaaatgcaa
gatctgatcaaatcccagaagactgtgcaagacgcagtgaagagtcttgaaggcccagct
tcacagaaagtgattgacgaggtcaccatttgtcacctcaggcctatgagactgccactc
aataactgcgtcttttgcaaagcagatgaactttttgtagattatgagtccaagctgttt
tctcacacggtgaagggtcagacggccatctttgaagagatgattgaggatgaagagggg
ctggtggatgaccgtctccccaccaccagccgaggactctgggcagccagtgagactgag
cgcactctgaaggccatcttgtcttttgccaaatctaaacgcatggatccagagttggtg
gaggagggtaacactttcatggagctgtttgagaactggaagaaggagtacaaggtgctg
catgagtactggatggtgctgcggaaccacgtgtcagccatcgatgagttgggtatggcc
acagagaggctacgcgtgcgactccccgacgagccgaagcccaaactgctgcacatcatc
gagccgcatgaggtggagcagaacagggtcaagcttttgaacgaccaggcagtcgccaag
tctcagcttcaaaagaagcttggccagtttctgtatctcacaaatctggagaagtcccag
gacaagtctactggagggctgaaccctgagccgtgtcccatctgtgcgcggcccctggga
caggagtgggcagtgctcacttgtggccactgcttctgtaacgagtgcattgctatcatt
gtggagcagtacagcgtgggctccaggcggcgtgccatcaagtgtgccatttgtaggcag
accacgtcccacacagagatctcctatgtgttcaccacacagtcatccagtcaggaccag
gacatcccagtcaagggaagccactctaccaaagtggaggcagtggtgagaacactgaag
aagattcaagtgactgaccccggggccaagtgtctcgttttctccacgtggcagagtgtc
ctggacatcatcgctaaggccttgtttgacaacaacatggagttctcgcaaatcaatggg
attcacaaatttcaggagaatctgagctccttcaaatacgaagagaagatcaacattctc
ctccttcctctccacacgggctccaatggtctgaacatcatcgaagcgactcacgtgttg
ctggttgagcccatcctcaacccagctcatgagctccaggccatcggcagggtgcaccgg
attggccaaaccaagccaacatttgtccacagattcctcattaaatccaccattgaagag
agaatgcaggcaatgctgaagacagcagagaaaagtcacaccagcacagccatgaagcac
tcggaggctgcggtgctgacagtagctgacctcgctgatctgtttactgatgatactgag
tctctggagtga
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integrated database retrieval system
