Xiphias gladius (swordfish): 120795531
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Entry
120795531 CDS
T07311
Name
(RefSeq) neuronal PAS domain-containing protein 3
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120795531
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120795531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
120795531
NCBI-ProteinID:
XP_039993456
LinkDB
All DBs
Position
LG10:25970465..26214502
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AA seq
990 aa
AA seq
DB search
MDSTKITTSDPYWERPANAGSCSAARPKTLHLAGQQHTSSPWLQALRKEKSRDAARSRRG
KENFEFYELAKMLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRIEGPPPNT
SVKAIGTQRRRSPSAIASEIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLS
QVELTGSSVFDYIHPGDHVEMAEQLGMKLPPGRGMSLSQGTVNEDGASSASSSSHSETPE
PVESSSPSLLAPDNSLERSFFIRMKSTLTKRGVHIKSSGYKVIHITGRLRIRMALTHSRS
VPNQIMGMVVVAHALPPPTINEVRIDCQMFVTRVNMDLKIVYCENRISDYMDLTPVDIVG
KRCYQFIHAEDVEGIRQSHLDLMNKGQCVTKYYRWIQKNGGYIWIQSSATIAVNAKNASE
KNIIWVNYVLSNPEYKDTPMDIAQLPNLPEKTSESSETSDSESESKENSGISTDNENTKS
EGKSGHQSERSEDPETDSKRQQQPGQSHCSSEQEMKRQEEGDSSSNPESQDSDDSLEPSD
GEGDEQEEARGGGGLGNLGGLHIKVEHYGDGEEVQLHNSQTSSSEEEEEDEDDDEEEDGG
MQDYDSANGGSKLQKRRKRRKVQKWDGSRSRRLRLSSTTPSPVAMGDTTPLVDPSQATSA
TSSHLLTSSGSPNSAGATSSVLKIKTEMAEPINFDNDSSIWNYPPNREISRNESPYSMTS
KPAPPGTHETFPSPQGGSLQVSIPDSVLTPPGTEGGAGGVRKPPYNGSSAPSSASSAASL
APPSSASSADPLSPPLSASPRDKQQGTPTTSSSSSSSSSSSSSSSSSTSSLLYSGDIEAL
QRLQAGNVVLPLVHRVTGTLAPTSTTAPRVYTTGTIRYAPADVTLAMAQGNLLPNAAMNF
VDSSGFGLDPKTPMEMLYHHVHRLNMSAAAAAGPFVGSPSATGGNGALGGQMPSAANVFT
TAEGLFSTLPFPVYSNGIHTTQTSLERKED
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggactctactaagataactacaagtgacccctactgggagcggccagctaatgcaggc
agctgctccgccgcccggcccaagacccttcacctggccggccagcagcatacctcctca
ccatggctgcaggctctgaggaaggagaagtcacgtgatgcagcgcgatcgcggcgggga
aaggagaactttgagttttacgaactggccaagatgctgccgctgccgggcgccatcacc
agccagctggacaaggcctccatcatccggctcaccatcagctacctgaagatgagggac
ttcgccaaccagggagacccgccgtggaatctgcgcatcgagggaccgccgcctaacacc
tccgtcaaagctatcggtacccagcggaggaggagtcccagcgccatcgcctcagagatc
ttcgaacctcacctgggcagccacattttacagtctctggacgggtttgtatttgcacta
aacaaggagggacgcttcctctacatctcggagaccgtctccatctaccttggactgtca
caggtggagctgactggcagcagtgtgtttgactatatccacccgggcgatcacgtggag
atggcagagcagcttggcatgaagcttcctccgggccgagggatgtctctgtcccagggg
accgtcaacgaagacggcgcgtcctcggcttcgtcgtcgtcgcactctgagactcccgaa
ccagtggagtccagcagtcccagtctcctggcccccgataactctctggaacggtccttc
ttcatccggatgaagtcaacgctcacgaagagaggagtgcacatcaagtcctcaggatat
aaggtgatccacatcacggggcgtctgcggatcaggatggctctgacgcacagccgctcg
gtgcccaatcagatcatggggatggtggtggtggctcacgccctcccgccgcccacaatc
aacgaggttcgcatcgactgtcaaatgtttgtcacccgagtcaacatggacctgaagatc
gtctactgtgagaacagaatcagtgactacatggacctgactccagtggacattgtgggg
aagaggtgctaccagttcattcatgctgaggacgtggagggaatcagacagagtcacctg
gacttgatgaacaagggtcagtgtgtgaccaagtactaccggtggatccagaagaacggc
ggttacatctggatccagtccagcgccaccatcgccgtcaacgccaagaacgccagcgag
aagaacatcatctgggtcaactacgtcctcagtaatccagagtataaagacacgcccatg
gacatcgcccagctgcccaacctgcccgagaaaacctctgaatcctccgaaacctccgac
tctgagtcagagtccaaagaaaactcaggtatctcaacagacaatgagaacaccaagtcc
gaggggaagtcgggtcaccagtcagaacgcagcgaggacccggagacagacagcaagcgt
cagcagcaacccggccagtcgcattgctcctctgaacaggaaatgaaacgccaggaagaa
ggagacagctcgagtaaccctgagagccaggacagcgacgacagtctggaaccttccgat
ggagagggagacgagcaggaggaggccagagggggaggaggacttggtaatctgggtggg
cttcatattaaagtagagcactatggggatggggaagaagtacagctgcacaactcgcaa
acttcttcatcggaggaagaagaggaagatgaggatgatgacgaggaagaggacggaggc
atgcaagattacgacagtgccaatggcggaagcaagctccagaagaggcggaagaggaga
aaagtgcaaaaatgggacggatcgcgaagtaggaggctccgtctgtcctcgactacgccc
agccccgtggccatgggagataccacaccgctggttgacccctcccaggccacatctgcc
acctcctcccacctcctcacctcctctggctccccaaacagtgccggtgcaacgtcctcg
gtcctgaagatcaagactgagatggcagagccgattaactttgacaacgacagcagcatc
tggaactacccacccaacagagagatttccagaaatgagtctccgtacagtatgacctcc
aagccggctcctccaggaacccacgagaccttcccctcaccccagggaggctccctccag
gtatccatccccgactctgtcctaacccctcctggaactgagggaggagccggaggagtg
aggaagcctccttacaacggaagctctgctccgtcctctgcttccagtgctgcgagttta
gcacctccctccagcgcctcctctgctgaccccctttctcctcctctctctgcctcccca
cgggacaagcaacaaggcactcccaccacctcctcctcctcttcttcttcttcttcttcg
tcctcctcctcttcctcatccacttcttcgctgctgtactctggtgacattgaggcccta
cagcgtctgcaggctggtaacgtggtgctcccgctggtccaccgggtcacagggactctg
gcccccaccagcaccacggctccacgggtctacacgactgggaccatcaggtacgcacca
gcggacgtcaccctggccatggcgcaaggtaacctcctgcccaatgccgccatgaacttt
gtcgacagctcggggttcggccttgaccctaagacgcccatggagatgctctaccaccac
gtccacaggctcaacatgtcggcggcggcagccgccggtccgtttgtcggatctccgtcg
gccacgggcgggaacggtgccctgggaggccagatgccatccgcagccaacgttttcacg
acagcagagggacttttctcaacgctaccgtttccagtgtacagcaatgggatccacacc
acgcagacatctctggagaggaaggaggattaa
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