Xiphias gladius (swordfish): 120795652
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Entry
120795652 CDS
T07311
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04137
Mitophagy - animal
xgl04140
Autophagy - animal
xgl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120795652 (hif1aa)
04137 Mitophagy - animal
120795652 (hif1aa)
04148 Efferocytosis
120795652 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120795652 (hif1aa)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120795652 (hif1aa)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
120795652
NCBI-ProteinID:
XP_039993665
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Position
LG10:13560007..13574143
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AA seq
756 aa
AA seq
DB search
MDTGIVPEKKRVSSERRKEKSRDAARCRRGKESEVFYELAQQLPLPHSISSSLDKASIMR
LTISYLRMRKLLSTDDPMSEEETELDIQLNSSYLKALDGFLMVLSEDGDIIYLSENVNKC
LGLAQFDLTGHSVFDFTHPCDQEELREMLVHKAGSKKTKEPNTERSFFLRMKCTLTSRGR
TVNVKSATWKVLHCSGHVRVYDTYTEQATNGLKEPPIPYLVLICDPIPHPSNIEVPLDTK
TFLSRHTMDMKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQV
STGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQEEKLILSLEQTEDV
KPVKEEQKEEEKAVVESSPPDMSPTLLKKDEEKGPELDVIKLFTQAVEDRPLASLYDQLK
EEPEALTLLAPAAGDTIISLDFSCPDSEIQLLKDVPLYNDVMLPASGEKLALPLSPLPPS
EPLHVTTSTSEDAKVESYAPAPTTTPTSHSSSEGVSPLDFCFPMDSDMSSDFKLDLVEKL
FAIDTEPKTPFTTQAMEDLDLEMLAPYIPMDDDFQLRGLTPEEPLSCGPVKSLKSSPVQV
TQDVNSYPSSPFSAPGSRTASPAPPEPVNAPHPATIIAKRTPQLDKEVSLRTLAAQNAQR
KRKLGDIKEIIGQGKLPEELEQGKKLKASESGTTRTILLLPSDLASRLLGSTSEGTSSPF
TLPQLTRYDCEVNAPLQGRQYLLQGEELLRALDHVN
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggaattgtaccagaaaagaaaagagtgagctcggagcggaggaaggagaag
tcaagggatgcagcgcgatgccggcgtgggaaggagtcggaggtgttctacgagctggcc
cagcagctgcccctgccccacagcatcagctccagcctggacaaggcctccatcatgagg
ctcaccatcagctacctgcgcatgaggaagctgctcagcactgatgacccaatgtcagag
gaggaaacagagctggatattcagctaaacagctcctaccttaaggctctggacggcttt
ctaatggtgctgtctgaagacggagatataatctatctctctgagaatgtcaacaagtgc
cttgggctggcacagtttgacctgactggacacagcgtgtttgactttacacatccctgt
gaccaggaagagctgagggagatgttggtccacaaagcaggctccaaaaagaccaaggaa
ccaaacacagagcgcagcttcttcctccggatgaaatgcactctgacaagcaggggccgc
actgtcaatgtcaagtcagcaacatggaaggttctgcactgctcaggtcatgtgcgtgtt
tatgacacctacactgagcaggctaccaacgggctcaaggagccacctattccctacctg
gttttgatctgtgaccccatcccgcacccctccaacattgaggtccctctggacaccaag
acctttctcagtcgccacacaatggacatgaagttcacgtattgtgatgagaggatcact
gaactcatgggttatgatccagaggacctgttgaatcgttctgtgtatgagtactatcat
gctctggactctgaccatcttaccaagactcatcataacttgtttgcaaagggccaagtc
agcacaggacagtaccggatgttggccaagagaggaggctttgtgtgggtggaaacccaa
gccactgtcatctacaacaacaagaactctcaaccacagtgtgttgtctgtgtcaacttt
gtgctcagcggcatccaggaggagaaattgatcttgtctctggagcagaccgaggatgtt
aagccagtgaaggaggagcagaaggaggaagaaaaggctgtggtggagagcagcccacca
gacatgtctccaaccctgctaaagaaggatgaggagaagggcccagagctggatgtgatc
aaactattcacccaggcagtagaggaccggccactggctagcctgtacgaccagttgaag
gaagagcccgaggccctcaccctgctagccccggccgctggagacacaatcatctccctg
gacttcagctgccctgattcagagatccagctgctgaaggatgtccctctctacaatgat
gtaatgcttcccgcttccggtgagaagctggctctacctctttcccccctgccgcccagc
gagcctctccatgtcaccacctccacctcagaggatgcaaaagtggagagctatgcacca
gctccaactactacacccaccagccacagctcctcagagggtgtcagtccattggacttc
tgtttccccatggactcagatatgagctcagactttaaactagacttggtggagaagctg
tttgccattgatacagagcccaagacccccttcaccacacaggcgatggaggacttagat
cttgagatgttagcaccctacatcccaatggatgatgacttccagctgcgtggtctgacc
ccagaagagcctctgtcttgtggaccagtcaaatcccttaagagttctccagtccaagtc
acacaggatgtcaacagctatcccagctccccattcagtgctccaggcagtcgcacagct
tccccagcaccacctgagcctgtaaatgcccctcatcctgccaccatcattgctaagagg
accccgcagttggacaaagaagtctcgctcaggaccctggcagctcagaatgcacagcgc
aaaagaaaactgggtgacataaaggagattattggacagggaaaattgcctgaggaactg
gagcagggcaaaaagctgaaggcctctgagtcaggaacaaccaggaccatacttctgctg
ccttcagatttggcgagtcgtctgctgggcagcacatcagaggggaccagttctcccttt
accctgccacagctcacccgctacgactgcgaggtcaacgcccccttgcagggccgtcag
tacctcctgcagggggaggagctgctgcgcgcactggaccatgtcaactga
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