Xiphias gladius (swordfish): 120795844
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Entry
120795844 CDS
T07311
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03013
Nucleocytoplasmic transport
xgl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120795844 (pnn)
03015 mRNA surveillance pathway
120795844 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120795844 (pnn)
03041 Spliceosome [BR:
xgl03041
]
120795844 (pnn)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120795844 (pnn)
Spliceosome [BR:
xgl03041
]
Complex C
Other components
EJC/TREX
120795844 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
120795844
NCBI-ProteinID:
XP_039993978
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Position
LG10:complement(7006183..7011949)
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AA seq
690 aa
AA seq
DB search
MAVAVRSLQDQLEKAKESLKHVDDNIRKLTGRDPNESRPGQIRRLGGPMAGVGGGRGRGI
NLLRRSLSDMGSGGPPAKQRDIEGALLRLAGDQRARRDARNDSDAEDDDDVKKPALQSSV
VATSKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESNVSTEKQKRRSEIEQK
LEVQAEAERKKVENEKRELFEERRAKQTELRLLEQKVELAQLQEEWTSHNNRLVKYIRTK
TKPHIFYLPGKMCSATQKLLDDSTKKLNAVFEERREAFAEHLSKMESRPRRQPNRDQDGN
TATGTDHPAEGKPAGQVVKVSDNRGVAEMEEEEEEDELEEERGKEGDSKVTGKGEGEERE
EEEIAGLKKADEEEERMELNEQGSEEKREGEEGIKGREDQKEKGDKEASPGSEEMEVEGE
REDRRKEEVGETKSKQGPTDLQNEKTQDNQSSEPTITPQEAPDTSQQPQPSPSAGEPAVQ
SSEPQGPSPTPEPQIASAVPGQDFIIPVLEVQDSAVENQAAERKSGDEAPQKLPNSQEAP
STTPAPSKEDEDSGRGKKKEKEPRKGRSHSNSSSSSSSGSSSSGSSSSSSGSSRSSSSSS
SSSSSSSNSSSRSRSRDSGKRKRRPSDRGRDRKKGEDRSHRKRGGSRGGGGGRDSKGSKE
RRKRRSEEGRGRSSRSDREHKDRDRKDKRR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgcggagcttgcaagaccagctcgaaaaagccaaggaaagcttgaaa
catgtggacgataacattcgcaaattaaccggacgtgatccgaatgaatcaagaccgggc
cagatccgtcggctcggcggccccatggcaggcgtcggaggtggtagaggcagaggaatc
aacctgctcaggcgcagtctctcagacatgggaagcggcggcccccctgccaagcagaga
gacatcgaaggagccctgctgagactggcgggggatcagagggccaggagagatgcgcgc
aacgacagcgacgccgaggatgatgacgatgtcaaaaagccggcgttgcagtcgtctgta
gtagctacctccaaggagcgaacgcgccgagacctcattcaagatcagaccatggatgag
aagggcaaacagaggaatcggcgtatgttcggcctgctgatggggaccctgcaaaaattc
aaacaggagtccaacgtctcgacggagaagcaaaagcgacgttcagagattgagcagaag
cttgaggttcaggctgaggcagagagaaagaaagtagagaatgaaaagagggagctcttc
gaagagaggagagccaaacagactgagctgagactactggaacagaaagtcgaacttgct
cagctgcaagaggagtggaccagccacaataatcgtctggtgaaatacattcgcactaag
acaaagcctcacatcttttacttgcctggaaaaatgtgctccgcaacacagaaactcctc
gatgactccaccaagaaactaaacgctgtgttcgaggagaggcgtgaggcttttgccgaa
cacctcagcaagatggagtcccgcccccggcgacagccaaaccgcgaccaggacggcaac
acggcaacagggacggaccacccagcggagggtaagccagcaggtcaggtagtcaaggtg
tcagacaacaggggggttgcagagatggaggaagaggaggaggaagatgagttggaggag
gagaggggaaaggaaggggatagtaaggtgacagggaagggggagggggaggaaagggag
gaagaggagatagcagggttgaagaaggcagatgaagaggaggagaggatggagttaaat
gagcagggtagcgaggagaagagggaaggagaggaggggattaagggcagagaggaccag
aaggaaaagggagacaaggaggcaagtccagggtcagaagagatggaggttgagggggag
cgggaggacaggagaaaggaagaagtgggagaaacaaaaagtaaacaggggcccacggac
ctccagaatgaaaagacccaagacaaccagtcctctgaaccaaccataacaccccaagaa
gcaccagacaccagtcagcagcctcagcccagtcccagtgcaggggaaccagcagtacag
tcctctgagccccaggggccttctcctaccccagaaccgcagatagcctctgccgtgcct
gggcaggacttcatcatccctgtccttgaggtccaggactcagcagtcgagaaccaggct
gcagaacggaaatcaggggacgaagccccacaaaaactgcccaattcccaagaggccccc
agcactacccctgcaccctctaaggaggatgaggacagtgggagaggaaagaagaaggaa
aaggagccaaggaagggccgcagtcatagtaacagctcctcctcttcctcttccggctcg
tcctccagcggaagttcctcttcttcctccggatccagccgctcttcctcatcatcgtca
tcctcttcatcctcatcgtccaacagcagcagccgaagtcgcagccgagacagcggtaag
cgcaagaggaggccatcggatagaggcagggacaggaagaaaggagaagacagaagtcac
cgtaagagaggagggagtagaggaggaggaggaggaagggactcgaagggatcgaaagag
aggaggaagaggaggagcgaggaaggaaggggcaggtcttcccggagcgatagggagcat
aaagatagagacaggaaggacaagagacgttaa
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