Xiphias gladius (swordfish): 120796100
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Entry
120796100 CDS
T07311
Symbol
si:ch211-233m11.1
Name
(RefSeq) NLR family CARD domain-containing protein 3 isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xgl04054
]
120796100 (si:ch211-233m11.1)
Pattern recognition receptors [BR:
xgl04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120796100 (si:ch211-233m11.1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
LRR_6
NOD2_WH
PRY
SPRY
LRR_1
LRR_4
DFF-C
DUF3198
DUF6238
Motif
Other DBs
NCBI-GeneID:
120796100
NCBI-ProteinID:
XP_039994394
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All DBs
Position
LG11:complement(253283..274123)
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AA seq
1241 aa
AA seq
DB search
MNSDCPREQWSMDRPNNFRYEQQSTDQRIHQKPDCPEPIHTYVSMNYDWSMDHSITFRDG
CHSPYQWNKLEKHQASCVSMKSDWSMDLPIFFKDGCHSVEQRNKLEKHQASCVSMKSDWS
MDLPIFFKDGCHSVEQRNKLEKHQASCVSMKSDWSMDLPIFFKDGCHSVEQRVDHESSEV
PSGQSAQQHRTHLDSIFMLLEENIVTFVKNELKKIQKVLGPDYPKCLESQKEDEEVLDSE
DEEQRRSSREAFLTITLNYLKKMKQEELADCLQSRHPIAACQCKLKSNLKEKFQCVFEGI
SKAGNPTLLNQIYTELYITEGGTGGVNDEHEVRQIETASRKPARPETTIRQEDIFKASPG
RDEPIRSVMTKGVAGIGKTVLTQKFTLDWAEDKTNQDIQFTFPFTFRELNVLKEKKFSLV
ELVHHFFTETKEAGISRFDEFQVVFIFDGLDECRLPLDFHNNEILTDVTESTSVDVLLTN
LIRGKLLPSARLWITTRPAAANQIPPECVDMVTEVRGFTDPQKEEYFRKRFRDEEQASRI
ISHIKTSRSLHIMCHIPVFCWITATVLEDVLKTREGGELPKTLTEMYIHFLVVQSKLKNV
KYHGGAGTDPHWSPESRKMVESLGKLAFEQLQKGNLIFYESDLTECGIDIRAASVYSGVF
TQIFKEERGLYQDKVFCFVHLSVQEFLAALHVHLTFINSGVNLLSEKKSTSQKSETRKHK
SAETHLYQSAVDKAVQSPNGHLDLFLRFLLGLSLQTNQTLLRGLLTQTGSSSQTKKETVQ
YIKNMIEKNLSPEKSINLFHCLNELNDRSLVEQIQQYLSLGTFFKLDFSAAQWSALVFIL
LSSEKDLDVFDLNKYSASEDALLRLLPVVKASNKALLSGCNLSERSCEALSSVLSSQSSS
LRELDLSNNKLQDSGVKLLSAGLESPHCTLETLRLRVCNLSERSCEALSSVLSSQSSSVK
ELDLSNNNLWDSGVELLSAGLESPHCTLETLRLSGCQITEEGCASLASALRSNPSHLREL
DLSYNHPGDTGVKLLSAGLEGPHWRLDTLRLESGGVRWLRPGLRKYFCELTLDTNTINRN
LRLSDNNRRVTYVRKDLAYPDHPDRFTYWSQLLCRNGLTGRCYWEVEWSGLVSIAVTYIG
IDRRGDSYDCEFGRNDQSWSLEYSGRRYSVRHNNKVTSIFSSSSVYDRVAVYVDCPAGTL
SFYRVSSDTLIHLHTFNTTFTEPLYPGFRLWSDSSVFLCSL
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtgactgtcccagggaacagtggtctatggatcgtcctaataacttccggtat
gaacagcagtcgactgatcagaggatccatcagaaaccagactgtcctgaacccatacac
acttatgtgtctatgaactatgactggtctatggatcattctataaccttcagagatgga
tgccactctccttatcaatggaacaagctggagaaacatcaagcaagttgtgtttccatg
aagagtgactggtctatggatcttcctatattcttcaaagatggatgccactctgttgaa
caaaggaacaagctggagaaacatcaagcaagttgtgtttccatgaagagtgactggtct
atggatcttcctatattcttcaaagatggatgccactctgttgaacaaaggaacaagctg
gagaaacatcaagcaagttgtgtttccatgaagagtgactggtctatggatcttcctata
ttcttcaaagatggatgccactctgttgaacaaagagtcgaccacgagagctctgaggtt
cccagtggtcagtcagcccagcagcatcggacacacctggactccatatttatgctgctg
gaggagaacattgtcacttttgtgaagaacgagctgaagaagatccagaaggttctgggt
ccagattacccaaaatgcttagagagtcagaaggaagatgaggaggtgttggacagtgag
gatgaagagcagaggaggagcagcagagaggcatttctgacgatcacactaaactatctg
aagaaaatgaagcaggaggagctggctgactgtctgcagagcagacatccaattgcagct
tgtcagtgtaaactcaaatctaacctgaaggagaagttccagtgtgtgtttgaggggatt
tcaaaagcaggaaacccaacccttctgaatcagatctacacggagctgtacatcacagag
ggagggaccggaggggtcaatgatgaacatgaggtcagacagattgaaacagcatccagg
aaaccagccagaccggaaacaacaatcagacaagaagacatatttaaagcctcacctgga
agagatgaaccaatcagatcagtgatgacaaagggagtggctggcattgggaaaacagtc
ttaacacagaagttcactctagactgggctgaagacaaaaccaaccaggacatacagttc
acgtttccattcactttcagagagctgaatgtgctgaaagagaaaaagttcagcctggtg
gaactggttcatcacttctttactgaaaccaaagaagcaggaatcagcaggtttgacgag
ttccaggttgtgttcatctttgacggtctggacgagtgtcgacttcctctggacttccac
aacaatgagatcctgactgatgttacagagtccacgtcagtagacgtgctgctgacgaac
ctcatcagggggaaactgcttccctctgctcgtctctggataaccacacgacctgcagca
gccaatcagatccctcctgagtgtgtcgacatggtgacagaggtcagagggttcactgac
ccacagaaagaggagtacttcaggaagagattcagagatgaggagcaggccagcaggatc
atctcccacatcaagacatcacgaagcctccacatcatgtgccacatcccagtcttctgc
tggatcactgctacagttctggaggatgtgttaaaaaccagagagggaggggagctgccc
aagaccctgactgagatgtacatccacttcctggtggttcagtccaaactgaagaacgtc
aagtatcatggaggagctgggacagatccacactggagtccagagagcaggaagatggtt
gagtctctcggaaaactggcttttgagcagctgcagaaaggaaacctgatcttctatgaa
tcagacctgacagagtgtggcatcgatatcagagcagcctcagtttactcaggagtgttc
acacagatctttaaagaggagagagggttgtaccaggacaaggtcttctgcttcgtccat
ctgagtgttcaagagtttctggctgctcttcatgtccatctgaccttcatcaactctgga
gtcaatctgctgtcagaaaagaaatcaacctctcagaaatctgaaacaagaaaacacaaa
tctgcagagacacacctctaccagagtgctgtggacaaggccgtacagagtccaaatgga
cacctggacttgttcctccgcttcctcctgggtctatcactgcagaccaatcagactctc
ctacgaggtctgctgacacagacaggaagtagctcacagaccaagaaggaaacggtccag
tacataaagaatatgatagagaagaatctgtctccagagaaaagcatcaatctgttccat
tgtctgaatgaactgaatgatcgttctctagttgagcagatccagcagtacctgagctta
ggaactttcttcaaactagatttctctgctgctcaatggtcagctctggtcttcatctta
ctgtcatcagaaaaagatctggatgtgtttgacctgaacaaatactctgcttcagaggac
gctcttctgaggctgttgccagttgtcaaagcctccaacaaagctctcctgagtggctgt
aacctctcagagagaagttgtgaagctctgtcctcagtcctcagctcccagtcctctagt
ctgagagagctggacctgagtaacaacaaactgcaggattcaggagtgaagctgctgtct
gctggactggagagtccacactgtacactggaaactctcagactaagagtgtgtaacctc
tcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctccagtgtgaag
gagctggacctaagtaacaacaacctgtgggattcaggagtagagctgttgtctgctgga
ctggagagtccacactgtacactggaaactctcaggctgtcaggctgtcagatcacagag
gaaggctgtgcttctctggcttcagctctgagatccaacccctcccatctgagagagctg
gacctgagctacaatcatccaggagacacaggagtgaagctgctgtctgctggactggag
ggtccacactggagactggacactctcaggttggagtctggtggagtccgatggttgaga
ccaggtctgaggaagtatttctgtgaactcacactcgacacaaacacaataaacagaaac
ctcagactgtcggacaacaacaggagggtgacatatgtgagaaaggatctggcatatcct
gatcatccagacagatttacctactggtctcagctgctgtgtagaaatggtctgactggt
cgctgttactgggaggtcgagtggagcggactggtttctatagcagtgacttacatagga
atcgacaggagaggagacagttatgactgtgagtttggaagaaatgatcagtcctggagt
ctggagtactctggtcgtcgttactctgtcaggcacaataacaaagtgacatctatcttc
tcctcgtcctctgtctatgacagagtagcagtgtatgtggactgtcctgccggcactctg
tccttctacagagtctcctctgacacattgatccacctccacaccttcaacaccacattc
actgaacctctttaccctgggtttaggctctggtctgactcctcagtgtttctgtgttct
ctgtag
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