Xiphias gladius (swordfish): 120796194
Help
Entry
120796194 CDS
T07311
Symbol
srfb
Name
(RefSeq) serum response factor b isoform X1
KO
K04378
serum response factor
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120796194 (srfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120796194 (srfb)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
120796194 (srfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
120796194
NCBI-ProteinID:
XP_039994616
LinkDB
All DBs
Position
LG11:19920516..19943226
Genome browser
AA seq
601 aa
AA seq
DB search
MLPSQVGSAPSGNGSASGRGTTGLGSGVVGGGIRPVLVRVGQALPGVSESAGAAGRQGER
DAIGMLGANGPGGPRGARPGNGTGVSPLQSALQGNMVGLNTGVVLPHAARFDPDRESAPL
CSGSDNDSDSGDDDDPVGSLGDSRRGVKRERGEMEAAVTGQEVGVPPGGYGMVSGGVAGA
KPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHV
YTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPSTDQRMSATGFEETDLTYQVSESE
SMGDTKDTLKPTFTVASLPGTTSSAQSTVPTTSTTMQVSSGPSFPITNYLAPVSASSSVS
ANGTVLKTAGGSTGVMQLPSGFTFMPAGTPLPPGTPTIPLSQLQQHSLALQGQHGQALAA
AQQPQQGQQAVFRFPAAVSLTGAGVPQQLQAIQVHPNTQSTSNNDSSPEISHTSTNSTAT
VSLPATIVTSSVPTSVAGHMMYPSPHTVMYASTPALADGGLAVLNAFSQSTSAMQVSHAQ
AQDTGAVPQVFLTAPPGTVQIPVSAVQLHPMVIGQQSSGSSSNLTELQVVNLDAAQNSKS
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgagccaggtcggatcggcaccatctggaaacgggtcagcttcaggcaggggt
accacaggactcggttcgggggttgtcggcggcgggatccgtcccgttttggtcagagta
gggcaagctttgccgggggtcagcgagagcgccggtgctgccgggcgacagggggaaaga
gacgccatcgggatgctgggggctaatggtccggggggtccgagaggtgcgagaccgggg
aacggcacaggggtgagccctctacagagcgccctccagggaaacatggtgggcttaaac
acgggagttgtgttgcctcacgcagcccggttcgacccggacagagagagcgctccgctg
tgcagcggttcggataatgactcggactccggagacgacgatgaccccgtgggttcactc
ggggacagcaggagaggggtgaagcgggagagaggcgagatggaagctgcggtgacgggg
caggaggtgggggtacctcccggaggttacggcatggtgtccggaggggtcgccggggca
aagccggggaagaagacacgtgggcgggtaaagataaagatggaatttatcgataacaag
ttgagaaggtacacgaccttcagcaagaggaagacgggtattatgaaaaaggcctatgaa
ctctccaccctgacgggaacccaggttctgttgcttgtggccagtgaaacgggtcacgtt
tacacttttgccactcgcaaactccagccaatgatcaccagtgaaacgggcaaagcactg
atccaaacatgcctcaactcgccagactcaccaccacgctcggatccctccacggaccag
cgcatgagtgccacaggcttcgaggagacggacctcacctaccaggtttcggagtcggag
agcatgggcgacacaaaggatacactgaagccgacattcacggtagccagcctaccaggc
accaccagcagcgcccagtccacagtacccaccacctccaccaccatgcaggtgagcagc
ggaccttcgtttcccatcaccaactacctggcgcctgtctcggccagcagcagtgtcagc
gccaacggtaccgtcctcaagaccgccggcggctccacaggtgtcatgcagctgcccagt
ggcttcactttcatgcccgcaggcactcctctcccccccggcacccccaccattcctctg
agccagctgcagcagcactccctggccctccaggggcagcatggtcaggctctggccgcc
gcccagcagccacagcagggacagcaggctgtcttccgcttccctgctgctgtctccctc
acaggagcgggggttccccagcagcttcaggctatccaggtccaccccaacacccagtcc
acctcaaacaacgacagcagccccgagatctcccacacctccacaaactccaccgctacg
gtgagtctcccagcaaccattgtcacctcgtcagtgccaacgtctgtggcgggtcacatg
atgtaccctagcccccacacagtaatgtacgcctccacaccggcgctggctgacgggggg
ctggctgtgctcaacgccttctcccagagcacctcggccatgcaggtgtcccacgcacag
gcacaagacacaggtgctgtccctcaggtgttcctcacagcacctccaggcacggtgcag
atccccgtctcagcggtgcagctacacccaatggtgattggccagcagtcgagcggcagc
agcagtaacctgacggagctccaggtggtcaatctggacgcggcgcagaactcgaagagc
gactga
DBGET
integrated database retrieval system
