Xiphias gladius (swordfish): 120796280
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Entry
120796280 CDS
T07311
Symbol
kcnma1a
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
120796280 (kcnma1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xgl04040
]
120796280 (kcnma1a)
Ion channels [BR:
xgl04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
120796280 (kcnma1a)
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
120796280
NCBI-ProteinID:
XP_039994849
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Position
LG11:complement(12678227..12813697)
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AA seq
1178 aa
AA seq
DB search
MLAEADGTVPHGSDSSMRTSNINNNINPDSSILISKMEDVVIPFSSEVPCDNNGQRMWWA
FLASSMVTFFGGLFIILLWRTLKYMWTVCCHCNIKNKEAQKVNNPANNQAADRAPKGPDE
KEEAPASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQ
NFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRS
WLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDP
WENFQNSQSLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEI
IELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNIS
PNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIM
RVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQG
LSTMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLK
LLLIAIEYKSEQRESSILINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHDDITDP
KRIKKCGCKRPADGATTPGNSGSQKEAGVRFKADCNLVEDEHPSTLSPKKKQRNGGMRNS
PNCSPKMMSRHDPLLIPGNEQIENMDMNVKRYDSTGMFHWCPSKDIEKVILTRSEASMTV
LSGHVVVCIFGDVTSALVGLRNLVMPLRASNFHYHELKPIVFVGSLDYLRREWETLHNFP
KVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIEDASLQDKECILASLNIKSMQFDD
SIGVLQANSQGFTPPGMDRSSPDSSPVHGFVRQASVTTGSNIPIITELVNDSNVQFLDQD
DDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALLA
EENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGI
YRLRDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRTSLSHSSHSSH
SSSKKSSSVHSIPPSNRQNRSSKTREARDKQKKEMVYR
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgaagcagatggcaccgttccccatggaagcgacagctctatgaggacaagc
aatatcaataataatataaacccggactcttcaatcttaatctccaagatggaagacgtt
gtcatcccgttctcgtctgaggtgccctgcgacaataatggacagcgcatgtggtgggca
ttcctcgcctcctccatggtgacgttctttgggggtctcttcatcatcctgctatggagg
accctcaaatatatgtggactgtttgctgccattgcaacatcaagaacaaggaggctcag
aaggtgaacaaccccgccaacaatcaggcagcagacagggcaccaaagggtcctgatgag
aaggaggaggccccagccagcgaggtgggatggatgacttcagtcaaagactgggccggc
gtcatgatctccgctcagacactcactggcagagttctggtggtgttggtctttgcgctc
agcatcggggcccttggaatatactttatagactcctcagatcctatagaatcctgccag
aacttctacaaagatttcacgttacagatcgatatggccttcaacgtcttcttccttctt
tactttggcctgcggtttatagcagccaacgataagctgtggttctggctggaggtcaac
tctgttgtcgacttcttcactgttcctcctgtgtttgtctctgtctacttaaacagaagc
tggctcggtttaagattcctgagagcactaagattgatacagttctcggaaatcttacag
tttttgaatatcttgaaaacaagcaattccatcaagctggtgaacctgtgttctatcttc
ataagcacatggctcacagctgctggattcatacatttggtggaaaactcaggggatcct
tgggaaaacttccaaaattcccagtcactttcctattgggaatgtgtctacttgctgatg
gtgactatgtctacagtgggctacggggacgtctatgcaaaaaccaccttggggcgcctg
tttatggtcttcttcatccttggtggtttggccatgtttgccagctacgtccctgaaatc
atagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggaga
aagcatattgtggtctgtggtcatattaccctcgaaagtgtctccaacttcctcaaagac
ttcctacacaaggacagggatgatgtcaatgtagaaatagtttttctccataatatttcc
cctaatcttgagctggaagccttgttcaaacgccattttacccaagtggagttctaccag
ggatctgtgctcaaccctcacgatctggcccgagtgaagatcgagtcagcagatgcctgc
ttaatcctagccaataaatactgtgcagatcccgatgctgaagatgcctccaacatcatg
agggtcatttcaatcaagaactaccatcccaagatcagaataatcacacagatgctacaa
tatcacaacaaggcccacctgctgaacattccaagctggaactggaaggagggcgacgat
gctatctgcttggcagagctgaaggcaggcttcattgcccagagctgtctggctcagggc
ctgtccacaatgctagccaacctgttctccatgaggtcctttattgagattgaggaggac
acatggcagaagtattaccttgaaggagtggctaatgagatgtacacagagtatttgtcc
agtgcatttgtgggcctctccttccccactgtctgtgagctgtgttacgtgaagctgaag
ctgctgcttattgccatcgaatacaagtctgagcagagagagagcagcatcctcatcaac
ccgggcaaccatgtcaagatgcaggagggaacgctgggattctttattgccagtgatgct
aaagaagtaaagagagcttttttctactgcaaagcttgtcatgatgacatcacagaccct
aagcggatcaaaaagtgtggctgcaagcgaccagcagatggcgctacaacaccagggaac
agtggaagtcaaaaagaggctggcgttcgattcaaagctgattgcaatttagttgaagac
gagcatccatcaactctctcgcccaaaaaaaagcagcgcaacggagggatgcgaaactca
cccaactgctcgcccaagatgatgagtcgacatgacccccttctaattcctggaaacgag
caaattgagaacatggacatgaacgtgaagaggtatgattcgacagggatgtttcactgg
tgcccatcaaaggacatcgaaaaagtcatcctgacccggagtgaagcctccatgacagtg
ctgagcggccatgtagtggtctgtatatttggggatgtcacgtccgctttagtggggctg
cgaaacttggtgatgcctttaagagccagcaacttccattaccatgagctaaagcctata
gtttttgtaggctcgctggattacctgcggagagagtgggaaactttacacaacttcccc
aaggtgtccatcttacctggtacaccattaagccgggcagatttaagggctgtcaacatc
aacctctgcgacatgtgtgtaatactgtcagccaatcagaacaatatcgaagatgcctca
ctgcaggataaggaatgcatcttggcatcactcaacatcaaatctatgcagtttgatgac
agcatcggagtcttacaggctaattcccaaggtttcacgcctcctggaatggacaggtca
tctccagacagcagtccagtacatggctttgttcgtcaggcttccgtcaccacaggatcc
aacatccccatcatcacagaactagtgaacgactcaaatgttcaattcctggaccaagat
gatgatgatgacccggacacagagctgtacctcactcagcccttcgcctgcggcaccgcc
ttcgctgtcagcgtactcgactccctgatgagcgcaacgtacttcaatgataacatcctc
acactgattcggacgttggtcacagggggagccacaccagagctggaggctctgttggct
gaggagaacgctctcagaggaggctacagcacaccacagacactagccaacagagacagg
tgtcgtgtcgcccagctagccctctacgacgggccatttgccgacttgggggatggcggc
tgctacggggatttattctgcaaggcactgaagacgtacaacatgctgtgttttggaatc
tacagattaagagatgctcatctcagtacaccaagccagtgtacaaaacgctatgtgatc
acaaacccaccatacgagtttgagctggtgcccacagacttgatcttctgcctcatgcag
ttcgatcacaatgccggccagtcccggacaagcttgtcccactcttcccactcctcccat
tcctccagcaaaaagagctcctccgtccactccatcccgccctccaaccggcagaaccgc
agcagtaagacccgggaggcccgcgacaaacagaaaaaagaaatggtttacagatga
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