Xiphias gladius (swordfish): 120796281
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Entry
120796281 CDS
T07311
Symbol
ddx43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43 isoform X1
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xgl03041
]
120796281 (ddx43)
Enzymes [BR:
xgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120796281 (ddx43)
Spliceosome [BR:
xgl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120796281 (ddx43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
ResIII
KH_PNO1_2nd
KH-I_KHDC4-BBP
CMS1
KH_2
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
120796281
NCBI-ProteinID:
XP_039994858
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All DBs
Position
LG11:6597101..6608246
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AA seq
709 aa
AA seq
DB search
MSDWEDECNEDGAAGAIIQEPATKSAPTEWKSPCDRRQRENIVFAVRAATGFGASREWRA
DRSAEVINRRGGGDGRPFPTSANRGGPGRRTFGVEKSGSSPPVTIAVENASVGRIIGRGG
AKIRELEDSTGARIKINKGGYEGEVVIFGSSAAQQRAKEMIEDLVADGRSQFHSGPGRGG
DCGRGGDGGVGNCSVWSAAELQAANATPARLSIDWNTIRENKEKYEELKWKDLPPMKKTF
YTEAESVSMLRAEEVSEWRKENNNIFVDDLKEEGAKRPIPNPCRTFLEAFELYPEVMENI
ERVGFVKPTPIQSQAWPVLLSGEDLIAIAQTGTGKTLAYLLPGFIHMDGQPVPRAECGGP
GMLVLTPTRELALQIESECNKYRYKGYKSICIYGGGDRRDQINLVKGGVDIVIATPGRLN
DLQMNELINLHSITYLVLDEADRMLDMGFEPQIMKILLDIRPDRQTVMTSATWPSGVRRL
ARSYLKNPMMVYVGTLDLAAVNTVQQTVLIVHEDEKKSYVFDFIRNMLPQDKVIIFVGKK
LVADDLSSDMCLQGLAVQSLHGDREQCDREEALKDFKESRVRILVATDLASRGLDVHDIT
HVFNFDFPRNIEEYVHRVGRTGRAGRSGAAVTLVTRENWRMAPELIHILERAGQEVPEEL
VLMAERYQMHKREKDMCNPRGGQGGGGGGGWRRDGGGRGGRDRGQNWGF
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactgggaagacgaatgcaacgaggacggagccgccggcgccatcatccaggaa
cctgctacaaaatcagctccgactgaatggaaatcgccgtgtgatcgccgtcaacgggaa
aatatagttttcgctgtgagagctgcaaccgggttcggagcctcaagagagtggagagct
gatcgtagcgccgaggtcataaatcggagaggtggcggcgatggccgcccgtttccgacg
agcgcaaatcgcggaggtccgggacgacggacgtttggcgttgaaaagtcgggctcttcc
ccgcctgtgactatcgccgtggaaaacgcttcagttgggaggataataggtcgtggagga
gccaaaattcgtgaacttgaagacagcacaggtgcaagaatcaaaataaacaagggtggc
tatgaaggtgaggtggtcatctttgggtcctctgctgcccagcagagggccaaggagatg
attgaagacctggtggcagatggccgatctcaatttcacagcggtcctggtagggggggg
gactgtggaagaggaggtgatggaggagtagggaactgctccgtctggtctgctgcagaa
ttacaggctgccaatgccaccccggcccgcctatccatagactggaacaccatccgagag
aacaaggaaaagtatgaagagctcaagtggaaggacctcccacccatgaagaagacgttt
tacactgaggcggagagtgtatctatgctcagagcagaggaagtcagtgaatggaggaag
gagaacaacaatatctttgtggacgacctgaaggaggaaggggcgaagcggcccattccc
aatccctgtcgcacttttctggaggcctttgagctttatccagaagtcatggaaaatatt
gagcgagttggctttgtcaaaccaaccccgatccagtctcaggcctggccagtgttgctg
agtggggaggacctgatagccattgctcagacaggaacagggaaaaccctggcctacctg
ctgccagggttcatccacatggacggacaacctgtacctagggctgagtgcggtggtcca
ggcatgttggtgctgactcctaccagagaattggccctgcagattgaaagcgaatgcaac
aagtaccgctataagggctacaaaagtatctgtatctatggtggaggggataggagagac
cagatcaacctggtgaagggcggggtggacatagttatcgccacaccaggccgactaaat
gacctacagatgaacgagctcatcaatcttcactccatcacctacttggtgctggacgag
gctgaccgtatgctagatatgggctttgaacctcagattatgaagattctcctggacatc
cgcccagaccgacagactgtcatgaccagtgccacctggcccagcggtgtgagacgattg
gccagatcctaccttaagaatcccatgatggtttatgtgggcaccctggacttggcagca
gttaacacagtgcagcaaacagtgctgattgtccacgaagacgagaaaaagtcctacgtg
tttgacttcatcagaaacatgcttccccaggataaagtcattatctttgttggcaagaag
cttgtggctgatgacctgtccagtgacatgtgtctgcagggtctggctgtacaaagtctc
catggtgaccgtgagcagtgtgaccgtgaagaggccctcaaggactttaaagagagtcga
gtgcgtatcctggttgccacagacctggcatctcgagggttggatgtccatgacatcaca
catgtctttaactttgacttcccacgtaacatagaggagtatgtccatcgcgtgggccgc
actggccgagctggacgttcaggtgctgctgttaccctggtaacaagagagaactggagg
atggctcctgaactgattcacattttggagcgagcagggcaggaggtccctgaggagctg
gtgctcatggcagagagataccagatgcacaagagggagaaggatatgtgcaatccaagg
ggaggtcagggcggagggggagggggagggtggaggagagacggtggagggagaggaggc
agggatcgaggccagaactggggattctaa
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