Xiphias gladius (swordfish): 120796312
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Entry
120796312 CDS
T07311
Symbol
npas4l
Name
(RefSeq) neuronal PAS domain-containing protein 4-like
KO
K26457
neuronal PAS domain-containing protein 4
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120796312 (npas4l)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120796312 (npas4l)
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Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
PAS_9
PAS_2
Per3-like_PAS-A
HLH
Motif
Other DBs
NCBI-GeneID:
120796312
NCBI-ProteinID:
XP_039994929
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Position
LG11:19617830..19623635
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AA seq
774 aa
AA seq
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MTIWCNSCKHHVRAPCTSHRLPEDDRRSCCRRIRSTKGASKARRDHINHEIRNMRALLPI
SQEDQERLSYLHSMAAICTYIRKSVLFQGLLAGERSHCSLPYEAFLHALHGFILVTTASG
RLVYVSENVAEHLGLSMIDVLQGDTFYDMVERSDVEIVKSNLDIENDSSSERSFICCMQT
SKAFKLRHSSCCSMLVRGSFQSFPQPCPPSSAASPSAEPLFVALCTPTVNRLRTSASHLC
HSFSSLHRLDMSFTQLSDSVLYFLGYPADEMTGRSWYSLIHPEDLSLSADSHRSLMQTDE
GFQVEMVLRLQCEDLSWTWIYVRANKDCQGINCTNYIISETEARFLQKTISSDAFRPSSL
ANSCLFAAQQAPCSQTYNNTKCFKRQRTSDSQSEEPGARDRRESEQDIHYVARASFQGDS
SPVPFGDGPALFTPPYSPASSSSPLQQEELSHDLLMDVHGYTDQLLSSPEGSPSYYSYPE
AGLTCHPSPSDSLPAAAEQTFDREAFGALAARSPLSSSSPTYDFQACRSDARLVPDCLSA
SDVCESPVDCALHQDDFGVLEQPEGGSLVQVHHVPHNALPIHSSLLTPNQSPTSTESNQY
NEREQAEISILAQQISSLASSFDMYHTLKPLQNVVQTAAAETLSSACDWPNHPPLPSVLP
LKHELVLDDGVFDSILKDLDMDTRKSSTSGPAVVSYSHQQGSVSSGSGPRRLAQEPLGLS
SANPEEPLPAEQFTAMDPFTLQLGRSDQNTGLHQLNRYMQSSLHQGGLAKENLY
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgactatttggtgcaactcctgcaagcatcacgtacgggctccgtgcacctctcaccgc
ctgcctgaggatgaccgccgctcatgctgcagaaggatcagatccaccaaaggagcctcc
aaagcccggcgggaccacatcaatcatgagatcaggaatatgcgggctctgttgcccatc
agccaggaggaccaggagcgtctctcctacctccactccatggcagccatctgcacctac
atcaggaagtctgttctcttccagggactcctggctggggagagatcacactgctctctg
ccctacgaggcctttcttcacgccctgcatggcttcatcctggtcactaccgccagtggg
aggctggtctatgtgtcggaaaatgtagccgaacatcttggtctgtccatgatagatgtg
cttcagggagacactttctatgacatggtggaacgatctgatgttgagattgttaaatca
aacctggacatcgaaaacgactcatcatcagagaggagctttatatgttgtatgcaaacc
tccaaggccttcaagctgagacacagcagctgctgctccatgctggtcagagggagcttc
cagtccttccctcagccctgtccgccctcctctgcagcctctcccagcgccgagcctctg
ttcgtggccctctgcacccccacagtgaaccgcctgaggacctctgcctcccacctctgt
cacagcttcagcagtttgcacagactcgatatgtccttcactcagctgtcagacagtgtt
ttatattttttggggtatccagcggatgaaatgaccggtcgatcatggtacagtctcatc
catcctgaagacctttcgttaagtgcagattctcacagaagtctaatgcagacagatgag
ggcttccaggttgagatggtgctgaggctccagtgcgaggatttgtcatggacctggatc
tacgttcgagctaacaaggactgtcagggcattaactgcactaactacatcatcagcgaa
acagaggccagatttctgcagaagaccatcagcagcgatgccttcaggccatcgtctctg
gcaaattcctgccttttcgctgctcaacaggcgccctgctctcagacctacaacaacact
aaatgttttaaaaggcagaggacatctgacagccagagcgaggagccaggtgccagagat
aggagggagtcagagcaagacatacactacgtggcgcgcgcctccttccaaggcgatagc
tcacctgttccctttggtgacggcccagctctcttcacccccccctatagcccagcctcc
tccagctcccctctgcagcaggaggagctaagccatgacctcctgatggatgtgcatgga
tacacggatcagctgctgtcctcccctgagggctctccctcatactactcctacccagag
gcagggctcacctgtcacccatcaccctccgactccctccctgcagccgccgagcaaacc
tttgaccgggaagccttcggtgcgctcgctgcccgctcgcctctctcctcctcatctccc
acctatgatttccaagcttgtagatctgatgctcgattagttccagactgcctgtctgcg
tccgacgtttgtgaaagcccagtggactgtgctctgcatcaagacgattttggcgttcta
gagcagccagaagggggcagcctcgtccaagtgcatcatgtgccccacaatgcgttgcct
atacattccagtctacttacccccaaccagtcacccacatccacagagtccaaccagtac
aatgagagggagcaggcagagatcagtattctggcacagcaaatctcttctctggccagc
agctttgacatgtatcacaccctgaaaccgcttcaaaatgtggtccaaactgcagctgct
gaaaccctgtcctcagcctgtgactggcccaatcaccctcctctcccctcggtccttcct
cttaagcacgagctggtgcttgatgatggcgtgttcgacagcatcctgaaagacctggac
atggacacaagaaaaagcagcacgtccggtcctgctgttgtgtcgtacagccaccagcag
ggttcagtgagcagcgggagtgggccccgtcgtttggcgcaggagcccctcggtctctcc
tcggccaacccagaggagccactgcctgcagagcagttcactgccatggatcccttcact
ttgcagttgggacgctctgaccaaaacactgggttgcatcaactcaaccgctatatgcag
agtagccttcaccaaggtggacttgctaaagaaaatctgtactga
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