Xiphias gladius (swordfish): 120796390
Help
Entry
120796390 CDS
T07311
Symbol
dis3
Name
(RefSeq) exosome complex exonuclease RRP44 isoform X1
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120796390 (dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120796390 (dis3)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
120796390 (dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Dis3l2_C_term
Toxin_R_bind_C
Motif
Other DBs
NCBI-GeneID:
120796390
NCBI-ProteinID:
XP_039995125
LinkDB
All DBs
Position
LG11:complement(10483854..10492648)
Genome browser
AA seq
952 aa
AA seq
DB search
MLKSKTFVKKTRSGGVMKIVREHYLRDDIWCGSEACTECKQDSTVLQKDACIESNLCSYP
HYLVPDTNVVLHQIDVLEDPVIRNVIILQTVLQEVRHRSAPVYKRLKDIIHEKEKNFYTF
TNEHHRETFIEREPGESANDRNDRAIRVAAKWYSQHLKTSESGTDGLKVVLLTNDQGNKQ
KAEESGLLVYKCEEYIKSLIANPELVDRLALSNCDKKEITSSKVLFPEHLPLSRIQAGIK
SGSFLQGTFRASRDNYLEATVFVQGEGEDSTEVLIQGLQNLNRAVHQDVVAVQLLPRDQW
VAPSSVVLQDVGTAKDDNPEEEEEEKAQLRISAAEAAKKPTGKIVGIIKRNWRAFCGMLN
ASQIKESTRHLFTPADRRIPRIRIETRQASTLAGQRIMVAIDGWPKDSRYPNGHFVRSLG
SAGEKDTEEEVLLLEHDVPHQAFSQVVLGFLPKMPWAITPEDMVRREDLRHLTVCSVDPP
GCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDKEAANRGTTVYLCGKRIDMVP
ELLSSNLCSLRSNVERLAFSCIWEMNHEAEILKTRFTKSVINSKASLTYAEAQMRIDDTT
KNDNITKSLRGLNKLAKILKRQRIEKGALTLSSLEVRFHMDSETHDPIDLQTKELMETNS
MVEEFMLLANISVAQKIYDEFPECALLRKHPAPPPSNYDILLKAAKSKGVEIHTDSAKAL
ADSLDVAKVEGFLYFNTLLRILATRCMMQAVYFCSGMDSNFHHYGLASPIYTHFTSPIRR
YADIIVHRLLAVAIGADSTYPDLMDKHKQSALCNNLNYRHKMSQYAQRASVAFHTQLFFK
SRGILNEEGFVLFVRKNAIIVLIPKFGLEGTVFFDTKDKTIPNLVFDEEGPTLKVEQHTF
HIFDNVKVTISLDDSNIQHQKIRMALIDPVIPGVSVPAPDVEPKAKKPKLDH
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaatctaaaaccttcgttaagaagacgcggtcgggtggggtgatgaagatagtg
cgtgagcattacttgagagacgatatctggtgcgggagcgaagcttgcactgagtgcaaa
caggactccacggtgctgcagaaggacgcgtgtattgagagcaatctctgctcttatcct
cattatctggtccctgacacgaacgtggtgctccatcagattgacgtgttggaggatcct
gtgatccgtaatgtgattatcctacagactgtgctgcaggaggtacgccaccgcagtgca
cctgtctataaacgcctgaaggacatcatacatgagaaagagaaaaacttctacaccttt
accaacgaacaccacagagagacatttattgaacgcgaaccaggggagagcgccaatgac
cgtaatgaccgtgccatccgtgtggcagccaagtggtacagccagcacttgaagacgtct
gagtctggcacagatgggctcaaggtggtcctcctcaccaatgaccaagggaacaagcag
aaggcagaggagagcggactgctggtgtacaaatgtgaagagtacatcaagagtctgata
gcgaaccctgagcttgtggatcgtctggcattgtccaattgtgacaagaaggagatcact
agcagtaaggtgttattcccagagcacctccctctgtccaggatccaagcaggaattaag
agtggctccttcctccagggcacctttagagccagcagggacaactatctggaagccacg
gtctttgtgcagggagagggggaagacagcacagaggttctcatccagggtcttcagaac
ctcaacagagcagtgcaccaagatgtggttgctgtgcagctgctgccgcgggatcagtgg
gtggcgccctcctcagtcgttctgcaggacgtaggcacagcaaaggatgataatcctgaa
gaagaggaggaggagaaagcgcagttgaggatatcagcggccgaagcagccaagaaaccc
acaggtaaaatagtgggcatcatcaaaaggaactggagggcattttgtggcatgctcaat
gcttcccagattaaagagtcaacccgccaccttttcaccccggcagaccgccgtatccca
cgcattcgcattgaaacacgtcaggcgtccacactggcgggccagaggatcatggttgcc
attgatggctggcccaaagactccagatatccaaatggtcactttgtgcgcagtctgggc
agtgcaggggagaaggacacagaggaggaggttctgctactggagcatgacgtcccacac
caggccttctctcaggttgtgctcggtttccttcccaagatgccatgggccatcacacca
gaggacatggtgaggagagaggacctgaggcatctgacagtgtgcagtgtggatcctcca
ggatgcacagatatagatgatgctctgcattgcagagagctggaaaatggaaaccttgag
gtgggggtccacatcgctgatgtcagtcacttcattagacctggcaacgctcttgacaaa
gaggctgccaaccgtggcaccactgtctacttgtgtggcaagaggatagacatggttcct
gagctgctcagctccaatctttgttctctacgctccaacgtggagaggctggctttctca
tgtatctgggagatgaaccacgaggctgaaattttaaagacacggttcacaaaaagtgtc
attaactcaaaggcatctctgacctacgctgaggcccagatgagaatcgatgacacaacc
aagaatgacaatatcaccaagagcctgcggggtctcaacaaactagccaaaatcctcaag
aggcagaggatagagaaaggggcattgacgctgtcatccttagaggtccgtttccacatg
gacagtgaaacccacgaccccattgacctccagaccaaagaactcatggagacgaattcc
atggtggaggagttcatgttgctggccaatatttcagttgcccagaagatttatgatgaa
tttccagagtgtgctttactgaggaaacatccagcgccgcctccatctaactacgacatc
ctgctcaaggctgcaaagtccaagggtgtggagatccacacggattcagccaaggcactt
gctgactctcttgacgtggccaaagtggaaggcttcctgtactttaacacgctactgcgc
atcttggccactcgctgcatgatgcaggcagtctatttttgttctggcatggacagcaat
ttccaccactacggccttgcctcacccatttatacacacttcacgtcacctattaggagg
tatgcagatatcatagtacaccgcctgctggcagtggccataggagcagacagcacctac
ccagatttgatggacaaacataagcagtccgccctctgcaacaacctcaactacagacat
aaaatgtctcagtacgcacagagggcatctgtggccttccacacacagttgttcttcaag
agccgaggcatacttaacgaagagggatttgttctgtttgtgaggaagaacgcgatcatt
gtactcatcccaaagtttggcctggagggaacagtcttcttcgacacaaaagacaaaact
atcccaaaccttgtttttgatgaagagggtcccactctgaaggtggagcagcacaccttc
cacatatttgacaatgtgaaggtcacaatcagcctagacgactccaatattcagcaccag
aagatccgcatggctctgattgaccctgtgatccctggtgtgagtgttccagccccagat
gttgaaccaaaggccaagaaaccaaaactggaccactga
DBGET
integrated database retrieval system
