Xiphias gladius (swordfish): 120796561
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Entry
120796561 CDS
T07311
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120796561 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xgl04990
]
120796561 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
xgl04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
120796561 (pdlim1)
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Ortholog
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
120796561
NCBI-ProteinID:
XP_039995479
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All DBs
Position
LG11:complement(20861665..20869037)
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AA seq
322 aa
AA seq
DB search
MPLRVVMQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAAQANLCIGDMILAIDGEPTETM
THLEAQNKIKGCIEEMVLSIDRSETKMWSPLSSEEGRTHPYKMNLASEPREVKHIGSTHN
RSALPFTGFGSKVVTNQYNSPSGLYSSENIKNFNSAVDGVKTIATANDPDDKAPSDPSKT
GKRPPVAADSEVYKMLQENQESDEPPRQSASFKVLQEILETGDSDKPSGFRSVKAPTTKI
GSSVGNAEKLPICDKCGSGIVGMVVKLRDKFRHPECYTCTDCDVNLKQKGHFFVEDQIYC
EKHARERVTPPEGYDVVTVFPK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcctctccgggtggtaatgcagggtcctggaccctggggattcaggctggttggggga
aaggacttcgagcagccactggctatttcccgggtcacccctgggagtaaagcagcccag
gccaacctgtgtatcggagacatgatcttggctatcgatggagagccgaccgagaccatg
actcacttggaagcgcagaacaagatcaagggatgcattgaggagatggtgctctccata
gacaggtcagaaactaaaatgtggtcgccactttcatccgaggaagggaggacacatcca
tacaagatgaatcttgcatcagagccacgggaggtgaaacacataggctcgacccacaac
aggagtgccctgccgttcactggttttggctccaaagttgtgactaaccagtacaacagc
ccctctggtctctactcttcagagaacatcaagaacttcaactcggctgtggacggggtt
aagaccatagctacagccaatgatcccgacgacaaagctccatcagacccgtcaaagaca
ggcaagcggccgcctgtggcagcagattcagaggtgtacaagatgctgcaggagaaccag
gagtccgatgagcctcctcgacaatcagcttcattcaaggtgcttcaggagattctcgag
acaggtgactctgacaaaccatcagggttcaggagtgtgaaagcacccacaacaaagatc
ggatcgtcagtggggaatgcagagaagttacccatctgtgacaaatgtggatctgggatt
gtggggatggtggtgaagctgagggacaagttccgtcaccccgagtgctacacctgcaca
gactgcgacgtcaaccttaaacagaagggacatttctttgtggaggaccagatttattgt
gagaagcacgcacgggagcgagtgactccgcctgagggctacgacgtggtcacagtcttc
cccaagtag
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