Xiphias gladius (swordfish): 120796800
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Entry
120796800 CDS
T07311
Symbol
cdh1
Name
(RefSeq) cadherin-1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04371
Apelin signaling pathway
xgl04514
Cell adhesion molecules
xgl04520
Adherens junction
xgl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
120796800 (cdh1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120796800 (cdh1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120796800 (cdh1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120796800 (cdh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xgl03036
]
120796800 (cdh1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xgl04515
]
120796800 (cdh1)
04090 CD molecules [BR:
xgl04090
]
120796800 (cdh1)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
120796800 (cdh1)
Cell adhesion molecules [BR:
xgl04515
]
Cadherins
Major cadherins
120796800 (cdh1)
CD molecules [BR:
xgl04090
]
Proteins
120796800 (cdh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_2
TM_ErbB1
PKD_4
Big_13
DUF6479
Motif
Other DBs
NCBI-GeneID:
120796800
NCBI-ProteinID:
XP_039995812
LinkDB
All DBs
Position
LG11:28243452..28267312
Genome browser
AA seq
899 aa
AA seq
DB search
MAATPFAVTGILIVVFQASALITAEEPTCVPGFESDMLIFKVTRKHLRQGTRLGKVGFTD
CTDHTKLLFNSDDSRFMVQTDGILTLKRNVVLHGGHQDFVIQSWDSEGHKMNVPVRVLHH
GHHQEHHHGDHRHLNHHNHLNAVDFANNTESAINPQVPVLHFPKSVDGLRRRKRDWVIPD
LSVTENDRGPYPLKVSQIRSNEDKVKKIYYSITGPGADQPPAGLFTMDRDTGNLYVTQPL
DREKVAKYTFQAHAVADGSGNAEVPMDIIVHVIDQNDNKPIFIQDTFLGEVPEASPEGFE
VITVEAKDIDQPNNDNSDIRYHIVSQDPQLPSNALFKINPVTGGIRVGASVLDREKYPKY
TLVVQAADMVGIGLTGDAKVILTVTDSNDNAPAFTQPSYEATVAENKVDALVIKMSVTDG
DDPHSSAWNAKFKIVDGDPEELFTVTTGSNKQDGIITTAKALDFEKSNKHTLLVAVENEV
PFAILLPTATATVVVNVLDVNEAPVFHPIERVVSKREDLAVDSDVVQYTASDPDTARKQK
VMYKIISDPSGWLNVAKETGLIKVKSNMDRESHFVKDNKYTALIGAYDNDEVPATGTGTL
IIQLEDVNDNAPIVEEREITVCKKESEPQLLSVTDKDGPGFAAPYSVSLQGMSKTNWTAR
MNDSKTGIILNLVTELASGEYTVVLRVSDNQGLEQDNTIQAKVCDCTGKFVSCNNKIVAG
NDLTVILGILGGILLLLMLVLLLLLFIRQRRGEKKEPLLQDEDIRDNIYYYDEEGGGEDD
QDYDLSVLHRGLDNRPEIFRNDVVPNFMPAPQYRPRPANPEEIGNFIDDNLKAADNDPTA
PPYDSLLVFDYEGSGSDAGSLSSLNSSSSGDQDYDCLNEWGPRFKKLADMYGGGKDDVL
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggcggccactccgttcgcagttacgggcattttaatcgtcgtttttcaggcctcagct
ttaattactgctgaggagccaacatgtgtacctggatttgagtcagacatgttgattttc
aaagtgaccagaaagcacctgaggcagggcacaagactgggcaaagtgggcttcactgac
tgcacggaccacacaaaacttcttttcaacagtgatgacagccgtttcatggtacagaca
gatggcatattgaccttaaagagaaacgtagttcttcacggaggacaccaggacttcgtc
atccagtcctgggactcagagggtcacaaaatgaatgttccagtcagggtattgcaccat
ggacatcaccaagaacatcaccatggcgatcacagacacctcaaccatcacaaccacctt
aatgcagtggattttgctaataacacagagagtgcaatcaatccacaggtacctgttctg
catttccccaagtctgttgatgggctgaggaggaggaagagagactgggttatacctgac
ctcagtgttactgagaatgacagaggaccctatccccttaaagtatctcaaatccgttct
aatgaagataaagtaaagaagatctattacagcatcactggtccaggcgctgatcagcct
cctgctggccttttcaccatggacagagacactggtaacctgtatgtcacacagccactg
gacagagagaaggtggctaagtacacgtttcaagcgcatgctgtggcagatggttcagga
aatgctgaggtccctatggatattatagtgcatgtaatagaccagaatgacaacaaacct
attttcattcaagacaccttcctgggagaagttcctgaggcctcaccagaaggttttgag
gtgattacagttgaggccaaagatattgaccagccaaataatgacaactcagatatccgc
taccatattgtgagccaggatccacagttgcccagtaatgccctgtttaaaatcaaccca
gtcactggaggcatcagagtcggtgccagtgtgctagacagagagaaatacccaaagtac
actctggtggtacaggcagcagacatggtgggaatagggttgactggagatgccaaagta
atcctcactgtaacagatagcaatgacaatgctccggccttcactcagccctcttatgag
gctacggtagcagaaaataaagtggacgctctggtcattaagatgtcagtaacagatggt
gatgacccacattcctcagcctggaatgccaagttcaagattgttgatggtgatcctgaa
gaactgttcaccgtgacaacaggaagtaacaaacaagatggaatcattactactgccaag
gctctcgactttgagaagagcaacaagcacactctgttggttgcagtggagaatgaggtt
ccttttgctattctgctgcccactgccactgccacagtggtggtgaatgtgctggatgtc
aatgaagctccagtctttcatccaatagagagggttgtgtcaaaacgggaggaccttgct
gtcgacagtgatgtggtgcagtacactgcttctgatccagacactgcacgcaaacagaaa
gtcatgtataaaataattagtgacccttcaggctggctgaacgtggccaaggagacaggc
ctgatcaaggtgaaaagcaacatggatagagagtcccattttgtcaaggacaacaaatac
acagcactcattggtgcatacgacaatgatgaagtcccagccacaggaactggtactctg
atcattcaacttgaagatgtcaatgacaatgctcccatcgttgaggaacgtgaaatcacg
gtgtgcaaaaaggaatcagaacctcagctgctttcagtaacagataaagatggaccaggc
tttgctgctccatacagtgtctctttacagggcatgtcgaagaccaactggacagctagg
atgaatgactcaaaaacaggaatcatcctaaatttagtcactgagctggccagtggagag
tacactgtggttctgagggtttcagataaccagggtctggagcaggacaacaccatccag
gccaaagtgtgtgactgcactgggaaatttgtgtcctgcaataacaagattgtagctggc
aatgacctgaccgtaatcctgggaatactgggaggcatcctgttgctgctcatgctggtg
ctgctgctgctattgttcataagacagagaagaggagaaaagaaggagcctctactgcag
gacgaagatattcgagacaacatctattactatgacgaagagggaggcggagaggacgat
caggattatgatctcagtgttctccaccgtggcctggacaaccggcctgagatattcagg
aatgacgtggtgccaaacttcatgccggctcctcagtaccggccacgccccgccaaccca
gaggaaatcggcaacttcattgatgataacctgaaggcagccgacaacgacccgacagcg
cccccctacgactcccttctggtgtttgactatgagggtagcggctctgacgcaggaagc
ctctcctccctgaactcatcgagcagcggagaccaggactacgactgcctcaatgaatgg
ggaccccgcttcaagaaactggccgacatgtatggaggaggaaaggatgatgtattataa
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