Xiphias gladius (swordfish): 120796952
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Entry
120796952 CDS
T07311
Symbol
nfkb2
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor NF-kappa-B p100 subunit
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04010
MAPK signaling pathway
xgl04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120796952 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
120796952 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120796952 (nfkb2)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
120796952 (nfkb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Death
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
120796952
NCBI-ProteinID:
XP_039996104
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All DBs
Position
LG11:complement(926144..957775)
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AA seq
895 aa
AA seq
DB search
MAGALRMSEAQFINVYENDLQLNLIPYDYIPPVDIKTEPYIPETAHGPYIQIIEEPKQRG
FRFRYECEGPSHGGLPGASSEKNRRTYPTVKINNYVGHARVEVQLVTHTDPPRVHAHSLV
GRYCTEKGTCTLDVGPDDLTASFSNLGILHVTKKGVVEILCKRLKDERKRQKGPHSTLTD
VEESACLKEAKELGKVMDLNIVRLKFTAYLHDSNGGFTRALKPVVSNPIYDSKSPNASNL
KISRMDKTSGSVLGGDEIFLLCDKVQKDDIEIRFYEDDEEGSWEAFGDFSPTDVHKQYAI
VFKTPPYHRTEIERPVTVFLQLKRKKAGDSSDPKQFTYIPQVQDKEEVLRKKQKPLPHYE
PWRGGRGGGAGGFGGGGGGGFQFNQQMNGAGGGGGTGVFFTGGFTGFGGGGGAQMSGSTH
QTGVAQQQTGGQTGSPLQQQLFQIATALHNRASQSARQTAAALLQYCSTGDARVLLAIQR
HLCGVQDSNGDTPLHLAIIHQQTGVIQQLVHTLLSSQQQHILNTANHLRQTPLHLAVITR
QVKVVEVLLRAGADPSLVDKDGRSPLHLAALAGDNTTLRPLLAHLGERHGHLVNTPDYHG
LHPLHLAVRRDGERCLRLLVEGGAKINAPEQKSGNTALHLAVRENLFKVACTLITELKAD
VNACTYGGNTALHLAASLGSPTLCSMLIAAGADKNVENDEPLFFNCSSEEEKDEDEPTTE
EVREPRSESRRPESRRSESRRSESRRSESRRSESRRSESRRSESRRSESRRSESRRSEKV
EDSGLDEDMLSRLVELLSVGDVPWRKLAEKLGMVTLTHLYQDSPTPCHHLLQHYKLGGGP
VEGLVEALQSLGLSEGVRLLRNTELRDDKHSTDATVDSGFGSQPMEEEEPPVANQ
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggccggagctctgaggatgagtgaagctcagttcatcaacgtctacgaaaatgatctg
cagctgaatttgattccatacgactacattcctccagtggacataaagactgaaccctac
atacctgagacagctcatgggccttatattcagatcatcgaagagccaaaacagaggggc
tttcgattccgttatgagtgcgagggtccgtcccacggtggactaccaggggcctccagc
gagaagaacaggagaacctacccaaccgtgaagattaataactacgtgggtcacgcccgg
gtggaggtccagctggtgacccacactgatcctcctcgtgtccacgctcacagtctggtg
ggacgttactgcaccgagaagggcacctgcacattggacgtcggccccgacgacctcacc
gcctcgttcagtaacctggggatcctccatgtgaccaagaaaggtgttgtcgagattttg
tgcaagaggctgaaagatgagaggaagagacagaaaggaccacacagtaccctgacagac
gtggaggagagcgcctgtctgaaggaggccaaggagctggggaaggtgatggacctgaac
attgtcaggttaaagttcaccgcctacctgcacgacagcaacggaggattcaccagagcg
ctgaaacccgtcgtctccaaccccatctacgacagcaagtctccaaacgcctccaacctg
aaaatctctcggatggataagacgagtggctcagtgctcggaggagacgagatcttcctg
ctctgtgacaaagtccagaaagatgacattgagatccgcttttatgaggacgacgaggag
ggaagctgggaggcgttcggcgacttctcacctaccgacgttcacaaacagtacgccatc
gtgttcaaaacgccgccgtatcaccgcacagagatcgagcggcccgtcaccgtcttcctg
cagctgaagaggaagaaggccggcgacagcagcgacccgaagcagttcacctacatacca
caggtccaagacaaagaggaggtgctgaggaagaagcagaagccgctgcctcactatgaa
ccctggagaggaggacgaggcggaggagctgggggtttcggcggcggaggaggaggagga
ttccagttcaaccagcagatgaacggagcaggaggaggaggggggacaggagttttcttc
actggaggtttcacaggctttggcggagggggaggggctcagatgtcaggctccacccat
cagacaggtgtcgcccagcaacagactggaggacagactggatcaccactacaacagcag
ctgtttcagattgccactgccctccacaacagagcctctcagagcgccagacagaccgcc
gctgccctgctgcagtactgcagcaccggggacgcccgggtcctgctggcaatccagagg
cacctctgtggtgtccaggacagcaacggagacactcctttacacctggccatcatccac
cagcagacaggtgtgatccagcaactggtccacactctgctcagcagccagcaacaacac
atcctcaacacggccaaccacctccgacagactcccctccacctggcggtgatcacccgg
caggtcaaggtggtggaggtgttgctgagggcgggggccgaccccagcctggtggacaaa
gatggccgcagcccgctgcacctggcagcgctggccggagataacaccacgctccgcccc
ctgctggctcacctgggagaacgccacggccacctggtgaacacccctgactaccacggc
cttcaccctctccacctggcggtgaggagggacggcgagcgctgcctccgcctgctggtg
gagggcggagccaagatcaacgcgcctgagcagaagagcggaaacaccgccctccacctg
gccgtcagagagaacctgttcaaggtggcctgcacgctcatcacggagctgaaggcggac
gtcaacgcctgcacgtacggaggaaacacggcgctccacctggcggccagcctgggctcc
ccgactctctgctccatgctcatcgctgcaggtgccgataagaacgtggagaacgacgag
ccgctcttcttcaactgctcttcggaggaagaaaaagacgaggacgaacccaccacagag
gaggtcagagagccgaggtcagagagccggaggccagagagccggaggtcagagagccgg
aggtcagagagccggaggtcagagagccggaggtcagagagccggaggtcagagagccgg
aggtcagagagccggaggtcagagagccggaggtcagagagccggaggtcagagaaggtg
gaggattcgggtctggacgaggacatgctgtcccggctggtggagctgctgagtgtcgga
gacgttccctggaggaaactggcggagaagttggggatggtgacgctgactcacctgtac
caggacagtcccacgccctgccaccacctgctgcagcactacaagctgggcgggggtccg
gtggaaggtctggtcgaagcccttcagtccctcggtctgtcagaaggagtccgactgctc
agaaacacggagctacgagacgacaaacacagcacagacgccacggtcgacagcggcttc
ggcagccagccaatggaagaagaggagccgcccgtggccaaccagtga
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