Xiphias gladius (swordfish): 120797041
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Entry
120797041 CDS
T07311
Symbol
sorcs2
Name
(RefSeq) VPS10 domain-containing receptor SorCS2 isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120797041 (sorcs2)
Membrane trafficking [BR:
xgl04131
]
Protein recycling
Others
Others
120797041 (sorcs2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
InlK_D3
BiPBP_C
DUF6786
Motif
Other DBs
NCBI-GeneID:
120797041
NCBI-ProteinID:
XP_039996213
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All DBs
Position
LG12:complement(3250099..3555653)
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AA seq
1152 aa
AA seq
DB search
MATLSPTKPVSTAAHLCLFLLTASAWMALPGPVRCDGGVDRTFDTGGGDGGSPLGLQRNG
EEEAFGAGRSPRFRRALSREKQMSLLSSSFVLKGDATHNQAMVHWTGENSSVILILTKYY
HADSTKVLESSLWRSTDYGTTYTKLNLMPGTTIVVTSFYICPTNKKKVVLVGSSINERDQ
MLFISTDEGSSFQRQSIAFTPDTLIFHPKEEDKILAYCKEGRLFASTDLGRKWTLLQERV
TKERVFWSVSGVDVDPDLVHMEMQDTSGGYLYVTCLIQNCSDKMVTAQFLGKIDHNSLLV
QDDYIFVKVTTGNRTKYYVSYRRNEFVQMRFPKYALPKDVQIVSSDENQVFLALQEWYQS
DTYNLYQSDPQGVYYSIILENVRSTKQPEENVLIDILEVRGIKGVFLANQKIDGKVMTLI
TYNKGRDWEPLAPPTTDMNGKPISCKAPDCHLHLHLRWADNPYVSGTVHTKDSAPGLIMG
AGNLGSKLVEYKEEMYITSDCGKTWRQVFEEEHHILYLDHGGVIVAIKDTSIPLKILKFS
IDEGQTWTIHNFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDWELVKVDFRQSFPRQC
TESDYDPWQLTDLQGEKCIMGQEQSFRKRKDTAFCIKGKSYTSALTTKPCQCTEKDYNCD
YGFERSQTEGDRCFADFWHDPDSPPEDCHLGQTYESTTGYRKVISNACEGGLNRQQSAKQ
HNCPLLPPRGLQVGIKGQMLAVAPGDDITFIVHQEQGDTSSTKYQVDLGDGVRAIYQNLT
VTDEPIQHRYENPGVYKVTVKAENMAGHDEATMYIQVTAPLQEVHLEVVPIAGRNHEVNL
TAIVLPTEANLTVFYWWIGDNLRPTLTLQNSLLTRFPETGEVSVTVQASNGRSMVQDTRT
VQVYDNFQVIPLSFSRNLDHFNPNIPEWREDIGQVVTKILAKITGVPQESLVTVVKAGLP
TTADLYVLPLDSKPAKRSVFVDKRIPAIMQAFNDNNVSFVVRGGLQVLVTLADPNAGLGL
IANDSTATAAETGYHGAAGGPGVWALAVIFLITIIATGSFILYKFKSPWLRTEDAYPPLF
FRKLPGSRNVYAQMHNEKEQEMTSPVNHSEDTQHIIQGEEFIDDDLDSQTLGNHSGVVLS
INSRELHSYLTS
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggcaactctaagccccacaaaaccggtctccaccgctgcgcacctctgcctttttctg
ttgaccgcctcggcctggatggcactgccgggacccgtgcgctgtgacggcggggtggac
cgtacgtttgacacgggcggcggagacggaggctccccgctgggcttacagaggaacggt
gaagaggaagccttcggcgcggggcgctcaccccgcttcaggagagcactgtcccgggaa
aaacaaatgtccctgctcagcagctcgttcgtgctcaaaggggacgcgacccacaaccag
gcgatggtccactggacaggagagaacagcagcgtcatcctgatactgaccaagtactac
catgctgactccaccaaggtcctggagagctcactgtggaggtctactgactatggcacc
acctacaccaaactcaacctgatgccaggcacaaccattgtggtgaccagtttctacatc
tgcccgaccaacaagaaaaaggtagtgctggtgggttcctccataaatgaaagggatcag
atgctgtttatcagcaccgatgaaggttcctccttccagcgacagtccatcgccttcacc
ccagacacactcatcttccaccccaaggaagaagacaagatccttgcctactgcaaggag
ggcaggctctttgcttctacagacctgggccgcaaatggactttgcttcaggagcgggtg
accaaggagagagtcttctggtctgtatctggtgtggatgtggaccctgatctggtgcac
atggaaatgcaagatacgagtggaggttacctgtatgttacctgtctcatccagaactgt
tcggacaaaatggtgacggctcagttcctcggcaaaatcgaccacaactcattgttggtg
caggatgactacatatttgtcaaggtcaccacaggaaatcgtaccaagtactatgtgtcc
tatcggcgcaacgagtttgtccagatgaggtttcccaagtacgccttgccaaaggatgtt
cagatagtgagttcggacgagaaccaggtcttcctcgccctccaggagtggtaccagtca
gatacatataacctgtaccagtcagacccccagggcgtctactactccatcatcctggaa
aatgttcgcagcaccaagcagccagaggagaatgtcctcattgacatcctggaggtacgt
ggaatcaaaggtgtcttcctggccaatcagaagatcgatggcaaagtgatgactctcatc
acctataacaaaggacgagactgggaacccttggccccacctaccactgacatgaatggc
aagccaattagctgcaaagcaccagactgtcacctccacctgcacttgcgctgggcggac
aacccctacgtgtctgggactgtccacaccaaagactctgctccaggtctcatcatgggt
gccggtaaccttggctccaagctagtggaatataaagaggagatgtacatcacttcagac
tgcggaaagacatggagacaggtttttgaggaagagcatcacatcctgtacctggaccac
ggtggggtcattgttgccatcaaggacacctctattcccctcaagatactcaagtttagt
attgatgaaggacaaacgtggaccattcacaacttcaccagcacctctgtgttcgttgat
ggactcctgagcgagccaggagacgagaccctggttatgactgtgtttggccacatcagc
tacaggtctgactgggagctggtcaaagtggacttcaggcagtctttcccccgtcagtgt
actgagtctgactacgacccctggcagctcacagacctgcagggagagaaatgcattatg
ggccaggagcagagtttcaggaagagaaaagatacagcattctgcatcaaaggaaagagc
tacacctctgctctcaccaccaaaccctgtcaatgcacagagaaagactacaactgtgac
tacggttttgagcggtcccaaacagagggcgatcgctgcttcgctgacttctggcatgat
ccagactcaccacctgaagactgccatcttggacaaacctacgagtccaccacaggctac
aggaaggtgatatctaatgcatgtgaaggggggctaaacaggcagcagagcgccaaacaa
cacaactgccctctgctgccccctagaggactacaggtcggcatcaaagggcagatgctg
gctgtagcgcctggtgatgacatcacattcattgtccaccaggagcagggcgacaccagc
agcaccaagtaccaggtggacctcggtgacggggttcgggccatttaccagaacctgacg
gtgacagatgaacccatccagcatcgctacgaaaacccaggcgtttacaaggttacagtg
aaggccgagaacatggcagggcacgacgaggccaccatgtacatccaggtcacagctcct
ctacaagaagtacacctagaagtggttcccatcgctgggagaaaccatgaggtcaatctg
acagccatagttcttcccactgaggccaacctgactgtcttctactggtggataggagat
aacctgcggcccacgctgactctgcagaacagccttctgactcgtttccctgagacagga
gaggtttcagtcaccgtccaggcttccaatggccggtccatggtgcaggataccaggact
gtccaagtctacgataacttccaggtcatccctctgagcttcagcaggaacctggaccac
ttcaacccaaacatcccagagtggagagaggacattggccaggtggtcaccaaaatactt
gctaagatcacaggtgttcctcaggagtccctggttacggtggtgaaggcaggcctcccc
accactgctgacctgtatgttctccccctggacagcaaaccagccaagaggagcgtgttt
gtagataagcgtattccagccatcatgcaggccttcaatgacaacaatgtcagctttgtg
gtgcgaggaggtctacaagtgctggtgacgctagctgacccaaatgcagggctaggtcta
attgctaatgactcaacagctacagcagcagagactggttaccatggagcagccggaggt
ccaggtgtttgggctctagcagtcattttcctgatcaccatcattgccacgggctctttc
atcctctacaagttcaaaagtccttggcttaggactgaggatgcctatcccccactgttt
ttcaggaagctcccaggcagccgcaacgtctatgcccagatgcacaacgagaaggagcag
gagatgaccagccccgtcaatcacagcgaggacacccagcacatcatccagggcgaggag
ttcattgacgacgacctggattcgcagactctaggcaaccattcgggtgtggtcctgagc
atcaactccagagaactacacagttacctaaccagctga
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