KEGG   Xiphias gladius (swordfish): 120797071
Entry
120797071         CDS       T07311                                 
Symbol
per1b
Name
(RefSeq) period circadian protein homolog 1b isoform X1
  KO
K21944  period circadian protein 1
Organism
xgl  Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xgl03400]
    120797071 (per1b)
DNA repair and recombination proteins [BR:xgl03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    120797071 (per1b)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 120797071
NCBI-ProteinID: XP_039996272
LinkDB
Position
LG12:complement(11314850..11338573)
AA seq 1439 aa
MSYDNSKSTASSSTRGRVARANAKDNDQEAGPEGLNSLKTSGGQPSANVTTQEQGSRTGG
GSSPSGGSGSGGLSVDQRGPNSDDMDGLSSGNDSGERESEGGMERENSSRGRQSTHSSHS
SSNGKDSAMMLETTESNKSSNSQSLSPPSGSLAYSLLSTSSEHDPPSTSGCSSDQSARVQ
TQKELMKAIKELKLRLPAERKAKGHSSTLNALKYALQCVRQVRANKEYYHQWSVEECQGC
SLDLSTFTIEELDNITSEYTLKNTDTFSIAVSFLSGKVVYVSPQGSSLLRCKPECLQGTM
FSDLLAPQDVSTFYSGTAPCRLPPWASCIGSASPPVDCTQEKSMFCRISANRMQGGEMRY
YPFRLTPYQLTLRDSDAAEPQPCCLLIAERVHSGYEAPRIPPDKRIFTTSHTPSCLFQEV
DERAVPLLGYLPQDLVGTPILLYIHPEDRPMMVAIHEKIFQFAGQPFDYSPLRMCARSGE
YLTIDTSWSSFVNPWSRKVAFIVGRHKVRTSPLNEDVFTTPQGCESRVTTPDIVQLSEQI
HRVLVQPVHSGGSQGYSSLGSSGSRGSHRSHQQHLSAASSSDSNGPAMDVAAAAAVALHK
PMTFQQICKDVHTVKTNGQQVFIESRNRQPPRKNTSTGTTCVRAVSSDPIRGLIADMTKP
PRALVPAPLVQKEPPTGYSYQQINCLDSIIRYLESCNIPNTVKRKCGSSSYTASSTSDDD
KQQEASGNSKGGSVSLVSEPPPLPPLTMATKAESVASVTSQCSFSSTIVHVGDKKPPESD
IVMEEAPTTPTLGPPSTTPTPPASGPIPPANTAITPLPPPPPPERDSRRNGSVGGGGGGR
LGLTKEVLSAHTQQEEQAFLDRFKDLSKLRVFDQTASSTVRCHTPAANPLSRGVRCSRDY
PAAGGSTGHRRGRGGKRLKHQESSDQQSSLGLSGSRQDPRTTTAPLPHNIPLGPPTNSSS
WPSVGSQASIPSAPFAPGMLPIYPVYPPLTQPLPIPDPSRFPPAQMVPPMMALVLPNYMF
PQMGAPISQPGAIPGHFYNPNFTYPGTTPAAVPSVISNPMPIPGTCAASRSSTPQSYTQT
PADREGAESPLFQSRCSSPLNLLQLEESPSNRLEVATALAASQQATPSAQGGAAGGPSST
NQRSSDDTSKENENGETNESNHDAMSTSSDLLDLLLQEDSRSGTGSAASGSGFSGTRSSG
SGSGSNGCSSSGTSGTSSSQGSHTSKYFGSIDSSENDHSRKQPAGGSSSAGGDGGEEQFI
KCVLQDPIWLLMANTDDKVMMTYQLPIRDMETVLREDREALRSMQKHQPRFTEEQKRELS
QVHPWVRTGRLPRAVNISGCTGCKSPPAVPPATPFDVEIHEMELCSVLKAQEEGAGEGKK
NLSETAMDEAHPQDEEEVEEKGTKTQDSSQDMTAEEQNATSEAVEEKAEAQQPESDMTH
NT seq 4320 nt   +upstreamnt  +downstreamnt
atgagttatgacaactcgaaatcaacggccagcagcagcactcgggggcgagtggcaagg
gccaacgcgaaagacaatgaccaggaggcagggccagaagggttaaactccctgaaaacc
agcggtggtcagcccagtgccaatgtcaccactcaggagcagggaagtagaaccggaggg
ggctcgtctcccagcggtgggtcaggatctgggggtttgtccgtagaccaaaggggtccc
aactcagatgatatggatggtctttccagcgggaacgactctggggagagggaaagcgag
ggcgggatggagagggagaacagttcacgtgggcgccagtccacacacagctcccacagc
tcgtcgaacggcaaggactctgccatgatgctggaaaccacagagagcaacaagagctcc
aactcccagagcctctcacccccaagcggctccttggcctacagcctgctgtcgaccagc
tcggaacacgaccctccttccacctctggttgtagcagcgaccagtcagcaagggtgcag
acccagaaagagctaatgaaggccatcaaggagctcaagctccgcctgccagctgagcgc
aaggccaagggtcactccagcaccctaaatgcactcaaatatgcacttcagtgcgtcaga
caagtcagagccaacaaggagtactaccaccagtggagtgtggaggaatgtcagggctgc
agtcttgacttgtctacctttacaattgaggagcttgacaatatcacttcggaatacacc
ctcaaaaacacagacacgttttccatagctgtgtcattcctgtcagggaaggttgtctac
gtatcaccccaaggctcgtccctgctgcggtgtaagcccgagtgtcttcaggggactatg
ttttcggaccttttggccccacaggatgtcagcactttctacagcggcacagcaccctgc
cgcctgcctccctgggcctcctgcatcgggtctgcctctcctccagttgattgcactcag
gagaagtccatgttttgtcggatcagcgccaaccggatgcagggcggcgagatgcgctac
tacccgttccgcctcacgccataccagctcactcttagagactcagatgctgctgagcca
cagccctgctgcctgctcatcgcagagagggtccactctggatatgaagctcctcgaatc
cctccagacaagaggatcttcacaaccagtcacactcccagctgcctcttccaggaggtt
gatgagagggcagtgccactgttgggctacctgcctcaggacttggtgggaacccccatc
ctgctctacatccaccccgaggacaggcccatgatggtggccattcatgagaagatcttt
cagtttgcagggcagccattcgactattcacccctgaggatgtgtgcccgcagcggggag
tatctgaccatcgacaccagctggtcttcctttgtcaacccctggagccggaaggtggcc
ttcatcgtagggcgccacaaagtcagaacgagccctctgaatgaagacgtgttcactacg
ccgcaaggctgcgagagccgggtcaccacgcctgacatcgttcagctgagtgaacagatc
catcgggtcctggtgcagccagtgcacagcggtggctcccaggggtacagctcgcttggg
tccagtggctcgcggggctcccaccgttcacaccaacagcacctcagtgccgcctcgtcc
agcgacagcaacggccccgccatggatgtggctgctgctgctgctgtcgctttacacaaa
cctatgacgttccagcagatctgcaaagacgttcacacggtcaagaccaatggacagcag
gttttcatcgagtcccgtaaccggcaaccacccagaaaaaacaccagcacaggcacaaca
tgcgtcagagccgtcagcagtgacccaatcagaggactcatagcggacatgacaaaacca
cccagagctttggtccctgcaccgcttgtacagaaggagcccccgaccggctactcctac
cagcagatcaactgtctggacagcatcataaggtacttggagagctgcaacattcccaac
acagttaaaaggaagtgcggctcctcctcctacactgcctcctctacgtctgatgacgac
aaacagcaggaggccagcggcaacagcaaaggtggttcagttagcctcgtaagtgaacca
cctcctctgccccctctgaccatggccacaaaggcagaaagtgtagcctcagtcacgtcc
cagtgtagcttcagcagcaccatcgtgcatgtgggagacaagaagcctcccgagtcagac
atcgtgatggaggaggctcctacaactcctacgctgggtcctccttctaccacaccaact
cctcccgccagcggcccgataccgcccgccaacacagcaatcacccctcttcctcctccc
cctccaccagagagggacagccggagaaatggaagtgtcggagggggcgggggaggccgg
ctgggtctgacaaaggaggtgctatccgcccacacccagcaggaggagcaggcgttcctt
gaccgtttcaaggacctcagcaagctgcgcgtgttcgatcagacggcatcttcgactgtg
cgatgccacaccccagctgccaaccctctgtcacgaggagtgcgctgttcccgggactac
cctgctgcaggaggcagcaccggtcacagacgtggtcgtggaggaaagagactcaagcac
caggagtcatctgaccagcaaagctctctgggtctgagcgggagccgccaagaccccaga
accaccacagcccccctgccccacaacatcccccttggacccccaacaaactcctcctcc
tggccttctgtaggctcccaggccagcattccctccgcccctttcgctcctggtatgctt
ccgatctaccctgtttacccaccgctcacacagcccttacccatcccagacccgtcacgt
ttcccccctgcccagatggttcctcccatgatggccctcgttctgcccaactacatgttc
ccccagatgggagcacccatctctcagccgggagccatccccggacacttctacaatcct
aacttcacgtatcccggcactaccccagccgctgtccccagtgtcatctccaaccccatg
cccattcccggcacctgcgctgcatctcgtagcagcaccccacagtcctacactcagacg
cctgctgaccgcgaaggtgcagagtcccccctcttccagtcccgatgctcctcccccctc
aacttgttgcagctggaggaatcaccaagcaaccggttagaggttgccacggccctggca
gcatcgcagcaggccacgccttctgcgcagggcggtgcagccgggggaccgagctcaacc
aatcagaggagctctgatgacacctccaaggagaatgagaatggtgaaactaatgagtcc
aaccacgatgcgatgtccacctccagtgacctgctggacctgttgctgcaggaggactcc
cgctcaggcactggctcagctgcctctggttcagggttctctgggacaaggtcctcaggt
tcaggctctggctccaacggctgcagttcctctggcaccagtggcaccagcagcagtcag
ggcagccacaccagcaagtacttcggcagcatcgactcatctgagaacgaccactcccgc
aaacagccagcagggggcagcagcagcgccgggggggacggtggtgaggagcagttcatc
aagtgtgtcctccaggaccccatctggctactgatggccaacacggacgacaaggtcatg
atgacctatcagctgcctatcagggacatggagacagtgctgcgagaggaccgtgaggcc
ttgaggagcatgcagaagcatcagccacgcttcacagaggagcagaagagggagctgagc
caggttcacccctgggtccgcacaggacgcctgccgcgagccgtcaacatctctggctgt
acaggctgcaagtctccccccgccgtgcccccggccaccccgttcgatgtggagatccat
gagatggagttgtgcagtgtgctgaaggcacaggaggagggcgccggcgagggcaagaaa
aatctctccgaaacagccatggatgaagctcacccacaggatgaagaagaggtagaagag
aaaggaaccaaaacacaagacagcagccaagacatgacggcagaggagcagaatgcgacc
tcagaagctgtggaggaaaaggcggaggctcagcagcctgagtctgacatgactcactaa

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