Xiphias gladius (swordfish): 120797146
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Entry
120797146 CDS
T07311
Symbol
rab39bb
Name
(RefSeq) RAB39B, member RAS oncogene family b
KO
K07925
Ras-related protein Rab-39B
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120797146 (rab39bb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120797146 (rab39bb)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
xgl04031
]
120797146 (rab39bb)
Membrane trafficking [BR:
xgl04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
120797146 (rab39bb)
GTP-binding proteins [BR:
xgl04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
120797146 (rab39bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
AAA_22
VGCC_beta4Aa_N
TniB
Motif
Other DBs
NCBI-GeneID:
120797146
NCBI-ProteinID:
XP_039996417
LinkDB
All DBs
Position
LG12:complement(14928255..14946707)
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AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHDWLEEARSHVQPHSIVFLL
VGHKCDLEAQRQVTRQEAEKLAGAYGMRYIETSARDAINVEHAFTELTRDIFALVRSGDI
TIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgatatggctctatcagttccggctgatcgtcatcggggactcgacggtgggc
aagtcgtgtctgatccggcggttcacggagggccgcttcgcccaggtgtcggaccccacc
gtcggcgtggacttcttctcgcggctggtggagatcgagcccgggaagcggatcaagctg
cagatctgggacaccgcgggccaggagcgcttcaggtccatcaccagggcttactaccgt
aactccgtgggtgggctcctcctcttcgacatcaccaatcgccgctccttccagaacgtc
cacgattggctggaggaggctcgtagccacgtccaaccccacagcatcgtcttcctattg
gtcggccacaagtgtgacctggaggcacagcgccaggtgacccgccaggaggcagagaag
ctggcgggagcatacgggatgcgctacatcgagacatcggcccgtgatgccatcaatgtt
gagcacgccttcactgagctgaccagagacatcttcgccttggtgcggtccggcgacatc
acaatccaggagggctgggagggcgtgaagagcgggtttgtcccaaatgtggttcactcc
tccgaggaagtgaccaagagtgaccgccgctgtctctgttga
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