Xiphias gladius (swordfish): 120797155
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Entry
120797155 CDS
T07311
Symbol
si:cabz01101003.1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04217
Necroptosis
xgl04622
RIG-I-like receptor signaling pathway
xgl04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120797155 (si:cabz01101003.1)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
120797155 (si:cabz01101003.1)
04625 C-type lectin receptor signaling pathway
120797155 (si:cabz01101003.1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xgl01002
]
120797155 (si:cabz01101003.1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120797155 (si:cabz01101003.1)
Enzymes [BR:
xgl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120797155 (si:cabz01101003.1)
Peptidases and inhibitors [BR:
xgl01002
]
Cysteine peptidases
Family C67
120797155 (si:cabz01101003.1)
Ubiquitin system [BR:
xgl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120797155 (si:cabz01101003.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
120797155
NCBI-ProteinID:
XP_039996439
LinkDB
All DBs
Position
LG12:complement(14797981..14809869)
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AA seq
1001 aa
AA seq
DB search
MSGAHEQNRKRRPPKMFLISTDLKIQDQLEGTIRLQRGYICQEQDLGKNRGDCPWVKVLD
NGVMVKIERKFLLEVPSDLNGLLEPVSEPEARLKLLTNPRKLQQLATLPVDTPLWVQIGQ
QDELAEAELKYIGPLTRGGSAVYFGVQLKGSAAGKGMSNGSYKGHRLFTCPEACALFLPA
SDIRIRHWSSRNGSDAHTREREHHHHHQQHRSSSSNHPSNGHHSNNIRPNYYLQQQQQQQ
QQQQQQQQQQNQSRHISFQQNCPSSPPQLQALGILPRTAESAPIAAQNQIPVRGAVSPPL
FHVGQRVCFPLEDTVYGGEVRYCGLLPGRSSSGMYVGVLLDAPVGNWDGHYRGEKLCHIP
SPLYGLLLPITKVSSEPKSYRHSPPHQMPKSILKLSLPPVTKPGPSSPSASAPKVALMPP
TKQALKPPPLPPPKPTQKPLPAPPLPPPKPRSPTSPAAPEQPQHTNGVHGPLSPLRSPDD
VKAAGENAEAGLEGELEVGSMVEVNDPPLFGVICWIGHINGIPEPVAGIELDQELSAGTD
GSYLGERHFRCPANKGLFVKLRNCRRDSRFPAPETPVNQVERCNSIAFAEWGSERVEEHT
PPVDGDEARELYQGWKRGIQGHLNSCYLDATLFSLFSCCSSADWVLFWPSDPETDRNSSQ
AQDLLRCEIVNPLRRYGYVCASKTMALRRLLEAANSDTGFTNQEKDPEEFLNKLFQLLRV
EPLLKIRSMTQQPQQCHLYQLFPPTLPPSPSTPLPHSPVDSPIPLSSPASSPMRVASVQA
LLESSFLHAGLKFVEAPSCLLLLMPRFGKDFKMFDAILPTLSLDITDLLDDTLRQCSICQ
AVAEWECLQCYEDLDITPGRLKQYCPTCNKQVHSHKNRMSHSPVKVGVPGGPWTGPLHYT
RQRMSLFAVTCIETSHYVSFIKHGPLPTDWLFFDSMADREGGENGFNIPWVKACPEVGRY
LSLSEEELRRVDAASLREPARRLLCDSYMCLYHSPELSLYK
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagctcatgagcaaaataggaagcgccgccccccgaaaatgtttttgatctcg
accgacctgaagatccaggaccagctggaaggtaccattcgactgcagcgggggtacatc
tgccaggagcaggatttgggcaagaacagaggggactgcccatgggtcaaggtgttagac
aatggcgtcatggtaaaaatagagaggaagttcctgctggaagtcccgagtgaccttaac
ggcctgttggagcctgtgtcggaaccggaggctcgcctaaagcttctaaccaatcccagg
aagttgcagcagctggccactttgcctgttgataccccgctctgggtccaaataggccag
caggacgagctggcagaggcagagcttaaatacatcgggccactgaccagagggggcagc
gctgtgtattttggggtacaactcaagggttcagcggcgggtaaaggaatgagcaacggc
tcctataagggccaccggctcttcacctgccccgaggcctgcgccctcttcctgccggcc
agtgacatcaggatccgtcactggtctagcaggaatggctctgatgcacacacgcgagag
cgagaacaccaccaccaccaccagcagcaccgcagcagcagcagtaatcaccccagcaac
gggcaccatagcaacaacatccgcccgaattattatcttcagcagcagcagcagcagcaa
cagcagcagcagcagcagcaacaacaacagaatcagagtcgtcacattagtttccagcag
aattgtcccagcagtcctcctcagctgcaagctcttggcatcctcccccgaacagcggag
tcggcgcccatcgctgctcaaaaccagatcccggtccgaggcgccgtgtcgcctccgctg
ttccatgttggccagcgggtgtgtttccccctggaggacactgtgtatggcggtgaggtg
cgctactgtggtctcctgcctggccggtcatcatcagggatgtacgtcggcgttctgttg
gacgctcccgttgggaactgggatgggcattacaggggagagaagctctgccacattcct
tcccccctctatggactactactgccaatcaccaaggtttcctcagagccaaaatcctac
cgtcacagtcctcctcaccaaatgcccaaatccattctgaaactatcgctaccccccgtc
actaaaccaggcccttcgtcgccatccgccagtgctcccaaggtcgccttgatgcccccc
accaaacaagcacttaaaccccctccactgccgccgccgaaacccacccagaaacccctg
cctgctccccctctcccccctccgaaaccccgcagtccaacatcgcccgccgccccggag
caaccgcaacacaccaacggcgtgcacggccctctatccccgctgaggtctccggatgac
gtcaaagctgcaggggagaacgcagaggcgggactggagggcgagctggaggtgggctcg
atggtggaagtgaatgacccgcccctttttggagtcatttgctggattggacatatcaac
gggatccctgagccagtggcgggaattgagctggaccaggagctgtctgcaggaacggat
ggcagttacctcggtgagcgtcacttccggtgtccggccaacaaggggctgtttgtcaag
cttcgcaactgcaggagggactccaggttccctgccccggagacgcctgtcaaccaagtg
gaacggtgcaactctatagcctttgcagagtggggcagtgagcgcgtggaggagcacacg
cctcctgtggacggagacgaggccagggagctctaccagggctggaagagaggcatccag
ggccatctcaactcctgctacctggacgctactctgttcagtctcttctcctgctgcagt
tcagcagactgggtgttgttttggccgtctgaccccgagactgaccgaaactccagtcag
gctcaagacctgctgcgctgcgagatagtcaacccccttcgaaggtatggctacgtgtgt
gccagtaagaccatggccctgagacgactgctggaggctgcgaatagtgacaccggcttc
accaatcaggagaaagatcctgaagagttcctcaacaagctcttccagctcctcagagtc
gagccgctcctcaagatcagatcgatgactcagcagcctcagcagtgccacctctaccag
ctcttcccgcccaccctccccccctctccctccacgcccttaccccactccccggtggac
tcccccatccctctgtcctcgccagcgtccagcccgatgagagtcgccagcgtccaggcc
ctgctggagtcctccttcctccacgccggcctcaagtttgtcgaggctccctcctgcctc
ttgcttctcatgcccaggtttgggaaggacttcaaaatgtttgacgccatcttacccacc
ctcagcctggacatcacagacctgctggatgacactctgaggcagtgcagtatctgtcag
gctgtggctgaatgggagtgtctccagtgttatgaagatctagacatcacgcccggtcgt
ctcaaacagtactgcccgacctgcaacaaacaggtccacagtcacaagaaccggatgtcc
cacagcccggtgaaggtaggtgtccccgggggaccgtggaccggccccctgcactacacc
cgccagcgcatgtctctcttcgctgtgacgtgcatcgagaccagccattacgtgagcttc
atcaagcacgggcccctccccaccgactggctgttttttgacagcatggcagaccgggaa
ggtggcgagaacggcttcaacatcccctgggtgaaggcgtgtcctgaggtgggtcgctac
ctcagcctatcggaggaggagctgcgcagagtcgacgccgcctcgttacgggagcccgcc
cgccgcctgctctgcgactcctacatgtgtctgtaccacagccctgagctcagcctgtac
aagtga
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