Xiphias gladius (swordfish): 120797184
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Entry
120797184 CDS
T07311
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl02010
ABC transporters
xgl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120797184
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120797184
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xgl02000
]
120797184
Transporters [BR:
xgl02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
120797184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
120797184
NCBI-ProteinID:
XP_039996510
LinkDB
All DBs
Position
LG12:9721973..9862103
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AA seq
2244 aa
AA seq
DB search
MGLLTQFTLLLWKNFTLRKRQKVRLVVEVIWPLFLFFILVWVRSTNKPIYQGQCHYPNKA
MPSAGVLPWLQGMICNINNPCLNYPTPGETPGQVNNFNNSIIAGMLIELQTLLVNRSILS
KAQLLADDIDQWASVLSQSNPGNAKPVTLRSILRDDETFSTHLKVNLTVPPKVAQSLLNA
KISVSPMMSIPRPGNLRRILCKGTDLDEYVQFSTQAEKEAFQNVSCSLSPQQLINTQQVL
LQNLDVRKVLSELPSPLGLNAANTATLLRKTTRNALPVIQEMARLQNSTIFKAASSLDFQ
EDMIGSINILLCGKQPDFNSTNMTLSLRSPRQMANNKSISIMGNSSEAFCQTLIDTLEGT
PGLRHIWSTFKPFLLGKVLYTPDTSAARLMVKEANSTFNALAMLKELADLWDELGPRVWD
FLQSSPQVNAIRALLGNPMFAAVLNQHLNGTGLTVEQLANFLYNGPPEDRPPGMPPYDWR
DVYNATAQILKLLSNFLGCLDLNKFEAAPTEGHLVSRALELLKNDTYWASVVFENLQQDS
SHPPPYVKYKIRMDIDEVESTIKVKDRLWSPGARDKAFNDLRYIWGGFAYLQDMMDHGII
RAQTSKTQPLGVFAQQMPYPCFVDDVFLRSLARSLPLYMTLAWIYSVAMITKGIVAEKEA
RLKETVRIMGLRSAIYWLSWAVSGVLPLAVSAVLLALILKYGKVLQYSDPSVIFVFLLVF
CVTTITQCFFISVFFSKANLAAACGGLIYFVLYLPHILCYAWRDVMGFRAKVAVSLLSCV
AFGYGCENFSKYEEQGIGIQWYNIGKSPEEGERYTFIVSIIMMLFDAALYWTLTWYIENV
FPGQYGIPKPWYFPFTASYWCGGASVTDADPGLLKDSSEHNEYLEKPPPNMKAGVSIRNL
VKIYKTGKKLAVDGLSVDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALINGYDI
HTDMDSIRKYLGMCPQHNVLFNELTVEEHIYFYARLKGRSRDEVKMEMDQMIKDVGLPHK
RKDLAKNLSGGMQRKLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWELLLKYKQGRTII
LSTHHMDEADILGDRIAIISNGKMRCCGSSLFLKKCFGSGYYLTLVRDGTEKMTAQRNGI
IHSQAIEVKDCPLRSSPDDGISSQSWNNSHPSGLTAVGQLVRRHVPEAVFLESIGQEINY
ILPYGGARDGTFALLFQELDLAMADLGLTSYGISDTTLEEIFLAVAEDTGVDAEIQTTKE
LLVRDCKRSSRESKRKSIASDRATPEQVARMSGKFTSKVEDLKRNASVSGKGSTVITGWE
LIRRQFLALFIKRFHHARRSRKGLIAQVVLPAVFVCLSLIFSLIVPPFTEYPSLELQPWM
YGLPQTTFYSNDGPDHVEVSQVVETLVNNPGFGTRCMNGNPIPKLPCSSSGSDWFTPSVD
QSVTDIFLNRNWSMSNPSPSCQCSTPKRTIMLPDCPPGAGGLPPPQRIQNTTDTLLDLTG
RNMTDFLVKTFQHSGKTRYGGISVGAVNSQVRLTEGAIEAAFRDLKDLFSPFQDNVTDHI
LQKSETLLKKLGTRDNVKVWFYNQAWHGMVSFLSVANNAILRGNLPAGQNPRQYGISVSN
HPLNLTKEQLSFVAMATTSTDVVVSICVIFAMSFIPASFVLFLIQERVNKAKHLQFVSGV
NPAVYWLANFAWDMCNYIIPCLIVIVIFLCFQQKAYVSPHNLPALILLLILYGWSITPMM
YPASFIFSVPSTAYVVLTCVNLFIGINGSVATFVMELFDDDNVSRINDIVKQVLLIFPHF
CLGRGLIDMAKNQAMATLFSSFGEDRFKDPLSWEMVGKNLCAMSIQGVVMFVITILIQYK
LFCKPRLISGKSLSEEEEDIDVARERDRVYEGKAQNDLLRICDLTKVYPRKSTPAVDRLC
VGVPAAECFGLLGINGAGKTTTFKMLTGDIPVSSGEAFLNGYSIRTEMRDVHQNMGYCPQ
FDAIDDLLTGREHLEFYARLRGVPENEVTMVAEWGIQKLGLVKYSNKSAGTYSGGNKRKL
STAIALIGCPPVIFLDEPTTGMDPRARRFLWDCILSVIKEGRSIILTSHSMEECEALCTR
MAIMVNGRFKCLGSIQHLKSRFGDGYTVTVRVGGSPPALKTVEDFVQQTFPGSVLKEKHH
NTLQYQLPYAQGALSTIFSQFTSHQQRLGVEDYSVSQTTLDQVFVNFAKHQHGEEDSQAY
DNPVDTSDELPMQSVKTFQEAERV
NT seq
6735 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcaattcactctgctcctgtggaagaacttcactctccggaagaga
caaaaggtgcgactggttgttgaagtgatatggcctctgtttctattcttcatactggtg
tgggtgcggtccaccaacaagccaatttaccaaggccagtgtcactacccaaataaagcc
atgccatcggctggtgtgctgccctggcttcaaggtatgatctgtaacatcaacaatccc
tgtttgaactacccaacgccaggggagacaccaggccaagtcaacaacttcaacaattcc
ataattgccggaatgttgatagagctgcaaaccctcctggtgaacagatctattctcagc
aaggcacagcttctggcagatgacatcgaccagtgggcttcagtcctgtcacagtctaac
cctggtaatgccaaaccagtcaccctaaggagtattctaagagatgatgaaactttctcc
acacatctgaaagtgaatttgacggtgccaccaaaagtcgctcaaagcctcttaaacgca
aagatttccgtcagtccaatgatgagcattccaaggccaggcaatctgaggaggatcctg
tgtaaggggacagatctggatgagtacgtccaatttagcacccaagctgaaaaggaggct
tttcaaaatgtcagctgctcactctctccacagcagctgattaacacccagcaagtactc
ctgcaaaacctggatgtgaggaaagtgctttctgagctaccgtcacctttgggtctgaat
gcagcaaacaccgcgacactgttgagaaaaaccactcgaaatgcattaccagttattcag
gagatggccaggttgcagaactccacgatctttaaggctgctagttcattggatttccaa
gaggacatgattggaagtatcaatatactactgtgtgggaagcagcccgacttcaattcc
accaatatgaccctcagtttacgctcacctagacagatggctaacaacaagtcaatctcc
attatgggcaacagttccgaggctttttgtcagactttgatcgacaccctggagggcaca
cctggtttgcgccacatttggagcaccttcaaaccattcttgctaggaaaagtcctctac
acacccgatacatccgctgctcgcctcatggtgaaagaagcaaatagcacattcaacgcc
ttggctatgttaaaagagctcgctgatttgtgggatgaacttgggccacgtgtctgggat
tttctgcaaagtagccctcaagtgaatgcaataagggctttgctggggaacccaatgttt
gctgctgtcctcaaccagcatctcaatggcacaggactgaccgttgagcaactggccaac
ttcctgtacaatgggcctcccgaggatcgtccacctggcatgccaccctatgactggcgg
gatgtttacaacgccactgctcaaatcctgaagcttctctccaacttccttggttgttta
gatctgaataagtttgaggcagcccccactgaaggccatctggtgagcagagcactggaa
cttctgaagaatgatacgtactgggccagtgttgtctttgaaaacctccagcaagactcc
agccacccccctccttatgtcaagtacaaaatccgcatggacatcgatgaagtagagagt
accatcaaagtgaaagacaggttatggtctcctggggcccgagacaaagcctttaatgac
ctgcgctatatatggggaggcttcgcctacctgcaggatatgatggaccatggcattata
cgagcgcaaacgtcaaagacccaacccctcggtgtttttgcccagcaaatgccataccct
tgtttcgtggatgacgtgtttctccggtctctggctcgctcgctccccttatacatgacg
ttagcctggatctactctgtggccatgatcacaaagggtattgttgctgagaaagaggcg
aggcttaaggagacagtgaggatcatgggcctgagaagtgccatctattggctgagctgg
gcagtgtccggtgtgcttccgctggctgtcagcgctgtcctgcttgcccttatactgaag
tacgggaaagtgctgcagtacagcgacccctcagtaatatttgtcttcctgctggtgttc
tgtgtgaccaccatcactcagtgcttcttcattagcgtcttcttctctaaggccaactta
gcagcagcgtgcgggggactcatctactttgtcctctatctgccgcacatcctctgctac
gcctggagggacgtcatgggtttccgggccaaggttgctgtgagtttattgtcatgtgtg
gcctttggctacggctgtgagaacttttccaagtatgaggagcaaggcatcgggattcag
tggtacaacattggcaagagtccagaagagggggaacgctacacattcattgtgtccatc
atcatgatgctgtttgatgctgctttatactggacgctcacctggtacattgagaatgtc
tttccaggccaatatggaatccctaagccatggtacttccctttcactgcgtcttattgg
tgtgggggagcctcggtgactgacgctgaccccggtttgttgaaggattccagcgaacac
aacgaatatctggaaaaaccaccacccaatatgaaagcaggggtctcaatccgcaatctt
gttaaaatctacaagactggaaagaagcttgctgtggacggactaagtgtggacttctat
gagaatcagatcacatcttttcttggccacaatggagctggaaaaacaaccacgatgtca
attctgacaggactgttcccgcctacatcaggcacggccctcatcaatggctatgacatc
cacactgacatggacagcatccggaagtatttgggaatgtgcccacaacacaatgtctta
ttcaatgagctgacagtggaggagcacatctacttctacgctcggctgaaaggacgcagc
agagatgaggtgaaaatggagatggaccagatgattaaggatgttggtttaccacataag
cggaaggatcttgctaagaacctgtcaggtggcatgcagcggaagctgtctgtggctata
gcatttgttggcggctcaaaaatcgtcatcttagatgagcctacagcaggagtggacccc
tatgcccgcaggggtatctgggaactgctgttaaagtacaaacaaggtcgcaccatcatt
ttgtccacacaccacatggatgaggcagacatcttaggtgatcgcattgctatcatctcg
aacggcaagatgcgctgctgtggctcctcactcttcctcaagaaatgtttcggcagcggc
tactacctcactctggtccgagatgggaccgaaaagatgacagcccagcgtaatggtatt
atacacagtcaggccatagaggtgaaagactgccctttgaggagcagcccagatgatggc
atcagcagccaaagctggaacaactctcatccctcaggtttgacagctgtgggtcaactt
gtgaggcgtcatgtccctgaggcagtcttcttggagagcatcggtcaggagatcaactac
atactgccctatggtggagccagagatgggacctttgctctgctcttccaagagcttgac
ctggccatggctgacctcggcctgaccagctatggcatctctgacaccacactggaggag
atatttcttgcagtggctgaagataccggagtggacgcagaaatacaaacaacaaaggag
ctgttggttagagactgcaaaagaagctcccgtgaatccaagcggaaaagcatcgccagc
gaccgcgctacaccagagcaagtcgccagaatgagtggcaaattcacaagtaaagtggag
gacttaaagaggaacgccagtgtcagtgggaagggatccacggtcatcactgggtgggag
ctgatcaggaggcagttcctggcgctctttatcaagcgcttccaccacgccaggaggagc
cgcaagggactcattgcccaggtggtcttgcctgctgtgtttgtgtgcctgtctctgatc
ttctcactcatcgtcccgcctttcactgaatatcccagtctggagctgcagccctggatg
tacggtctgcctcaaaccacattttacagcaatgatgggccagatcatgtggaggtgtct
caggtggtggaaaccttggtgaacaaccctggctttgggactcgctgcatgaatggaaac
cccataccgaagttaccgtgttcctctagtgggtctgattggttcactccatccgtagat
cagtcagtcactgacatcttcctcaacaggaactggagcatgtctaacccctccccttcc
tgtcagtgcagcacacctaaacggacgatcatgttacctgactgtccaccaggtgcggga
gggctccctccaccccagaggatccagaacacaacagacacattgctggatctaactgga
cggaacatgacagacttcttggtcaagacttttcagcactcgggtaaaacaaggtacggg
ggaatctctgtcggagcagtcaactcccaagtccgtctgacggagggggcaattgaagca
gcattcagggatttgaaagacctattcagtccatttcaggataatgtgactgatcacatc
ttacagaagtccgagacgctgctgaagaagctcggaaccagggacaatgtaaaggtgtgg
ttctacaaccaggcatggcacggcatggtgtctttcctcagtgtggccaacaacgccatc
ctgaggggaaatctgccagcaggacagaatccccgccagtacggcatctctgtgtccaat
caccctctcaacctcaccaaagagcagctgtcctttgtggccatggccacaacctccact
gacgtggtggtgtccatctgcgttatctttgccatgtccttcatccctgccagctttgtc
ctcttcctcatccaagagcgggtgaacaaagccaagcatctgcaatttgtcagtggggta
aacccagctgtatactggttggccaattttgcctgggacatgtgtaactacatcatccca
tgcttgattgtgattgtgatcttcctctgcttccaacaaaaagcctatgtttcccctcat
aacctgcctgctctgattctgctgcttattttgtatgggtggtccatcacccctatgatg
tacccagcctccttcatcttcagtgtgcccagcacagcctacgtggtgctgacctgcgtc
aacctcttcatcggtattaacggcagcgtggccacctttgttatggagctctttgatgac
gataatgtctcccgcatcaacgacatagtgaagcaggtgctgctgatattccctcatttc
tgtctgggcagaggactaattgacatggccaagaaccaggcaatggccaccctcttcagt
agttttggagaagaccgtttcaaggatccactcagctgggaaatggtgggaaagaacctt
tgtgccatgtccatccagggagttgttatgtttgtcatcacaatcctcatccagtataag
ctcttctgcaaaccaaggcttatttcagggaagtcattatctgaagaggaagaggatatc
gatgttgctcgagaacgtgaccgagtgtatgaaggcaaagcccagaacgatcttctgagg
atctgtgacctgacaaaggtataccctcgaaagagcacccctgctgtggacaggctatgt
gtgggcgtacctgccgcagagtgtttcggcttgctgggaatcaatggggccgggaaaacc
accacattcaagatgctgacaggagacatcccagtctctagtggagaggccttcctaaat
ggatacagcatacgaactgaaatgagggatgtacaccagaacatgggctattgtccccag
tttgacgctattgatgacctacttactggacgagaacatctggagttttacgccaggtta
cgaggggtaccagaaaacgaggtcaccatggtggcagagtgggggattcagaagttgggg
ctggtcaaatattccaacaagtcagcgggaacctacagcggtgggaacaaacgtaaactt
tctacagctatagccctgatcggttgtcctccagtgatcttcctggatgagccgactact
ggtatggacccaagggcccggcgcttcttgtgggactgcatcctaagtgtcatcaaagag
ggacgctcaatcattctcacatcacacagtatggaggagtgtgaagcactgtgcacacgc
atggccatcatggtaaatggccgcttcaaatgtctcgggagcatccagcatcttaagagc
agatttggagatggctacacagtcactgtgagggttggtggctctcctccggccttgaag
acagtcgaggactttgtccagcagaccttcccaggcagtgtcctgaaggagaagcatcac
aacacgctgcagtatcagctgccatatgcacagggagctttgtccaccatcttcagccag
ttcaccagccatcagcagaggctgggtgtggaagactactctgtgtcccagaccactcta
gatcaggtctttgtgaattttgcgaagcaccagcatggagaagaggactcccaggcctat
gacaacccagtggatacttcagatgagctgccgatgcagtcggtgaagaccttccaagag
gcagagagggtttaa
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integrated database retrieval system
