Xiphias gladius (swordfish): 120797221
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Entry
120797221 CDS
T07311
Name
(RefSeq) uncharacterized protein LOC120797221 isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120797221
03036 Chromosome and associated proteins [BR:
xgl03036
]
120797221
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xgl03037
]
120797221
Enzymes [BR:
xgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120797221
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120797221
UBL E3 ligases
120797221
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
120797221
Cilium and associated proteins [BR:
xgl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
120797221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
zf-ANAPC11
PWI
Motif
Other DBs
NCBI-GeneID:
120797221
NCBI-ProteinID:
XP_039996610
LinkDB
All DBs
Position
LG12:18892751..18902435
Genome browser
AA seq
1715 aa
AA seq
DB search
MPLTVRNSARRRKKNPDEKLPERPGESTSALVMAPTRMKLRVRRRDGAGAAGGGQPAEEE
RSRESSSRSSSRRKNTSNTSTPAAATSSPPTSSASASARAVVAAEDASPDSKCPICLDRF
NNLAYLDRCLHRFCFPCIQEWSHNKAECPLCKQPFASILHSVRAENDFKEYTLRPAPANS
SVAATVAMVAAMASAARSDHQMRLMLRRHRVADGGETTTRRRRRERGGRGGGSRRTGVWE
WYLDSPPLPLPPLTHHPAISPVVAEDSGEGEDVEQQRMRGGADVAERGVIFEGLTGLGGA
VAAAPNDRASRRLMTRLAARQRLQREGGTVRRLRERETVAFRRALYRCGIRVRGVAGVSG
NQGQQCDITAESFRRNPGHLNRLRPWLRRELTVLYGAHGTLVDIVQRIIMAQLARHGLED
TPTIEEELRPFLLARTDHFLHELVSFARSPLSLENYDLQAVYEPLAATLELDRTSSPSDS
SSVIAISEGEEEESRAGGRSEERAGGAHNDVIPTGSCLSLSAWDDETPGPSYSTAESSCS
LAPLSFSPAPQGTANEEGGEKREEEAEDECLIVGYKKPIAERTPELVQLSSDTEEEEDKE
KGEEKTGEKLPPLPSTTPPLSYLPTIPPSTSHAYREEQDNKPKEKDGEAGGRHSRTRLWS
GSSGRSLESVCTLSPKEQRRESWRDRKQSGSEVVREKRRRKRRRRGRERSGTLFNPNRSI
YPAMMRRRSHSPSPFHTSVESGSPLPPSPPDSSWEYHCSPLTSSVSSPSRSSSSSSPLGS
SPQPSSPPPQTPPTPSLSPGNAYHREKPGGKRKYKSRHLDSNDKDPTWRPSSSLRREKRR
ERGEKERRRRRGRDGGRRRERPRREAHRESASYCGESSSSRRCRDDRSPSVEIIYEGTIA
SHETQPPTRKRRRKHHRKIQHSSSPVIITLDSDSSHDANKNSNSSSPLSSQQTVDFSDLP
PLPLVHSAGVGGALDAEIGELPVDILDRGSDGSETEPAGQSEAAGPIAIDNSDNSDHDVD
VENVEEIGSLLGCDHGPIRKADTKATPANNPREATSVDGGSQQTGGNDSAPRMTDFRKRN
FEVSTSDSFLLTSIPNDLKGIAAPGCDLSLNFERSCSPDTRRKRFRDPCEASWAHSYRGG
WLAETRHPSCDLPEEPQSNDVRDRNLDLDLPTCHTSNPLPPPIQQLKECRVREGGVDIPP
RLKQASPVRSYNRNTPPPLKHKDVGSPHLSPISPVDLHALHASVDFDPVGVNTPVDLNSN
PTVSHVDSRLVPELPRHNQAIPPISTLKKHFTSALALRGELPPTGSNPAVDMHSSCLLAP
VDSHAAAPSGVRAFNTSIHSTSHKPPVETHSSSGSGKSSTSADCLPDLDFLNSFHSSKLH
SSRDSTKAMPSCGLRSSPINLHPVNSLSPIDFHSAKTGWSKEKPANTDSTSRGCRNTTLI
PNSCRVVPVDLHLSSGVSAGSGVFSGVNSNDTSPAVLVSSLDSRTQNPSPPTDSHSSNKR
ENLSQRLGISSLPTTAPSGRLSPIDLDPRSPKSTVDLHSSGVASEGLTDSKESSTVNRQD
ISALGHPPPVNLHCTSPLPPANLHSSYFSTTAIDGHFNHTALPSSTFNTSHRKCSSRSQA
TVESRSKHRNHVGPSSDPQFPNDNRSAHGLPVDAHSKSSRRDCQLHADNHITSSPQSVEN
QWNSDSFIEAHSDSQSAVDEHSASSVWTTHTHPAT
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcacagtgcggaattctgcccggaggaggaagaaaaacccggatgagaagctc
ccggagcgacccggggagtcgacttctgctctggtgatggcgcccacgcggatgaaactg
cgtgtgcgtcgccgtgatggtgcaggtgcagcgggaggaggtcagccggcggaagaggag
aggagtcgagagagcagcagtcgcagcagcagcaggaggaaaaacaccagcaacacgtcc
acccctgctgccgccacctcctcgcctcccacctcctctgcctcagcctcggcgagggcg
gtggtggcggcagaggacgcgtcgcctgactccaagtgccccatctgtctggaccgcttc
aacaacctggcgtacctggaccgctgcctgcaccgcttctgcttcccctgcatccaggag
tggtcgcacaacaaggccgagtgtccgctctgcaagcagcccttcgcctccatcctgcac
tcggtccgtgcagagaacgacttcaaggagtacacgctgcgaccggcgcccgccaacagc
agtgtcgccgccactgtggcgatggtggcggcgatggcgtcggcggcaaggagcgaccac
cagatgaggttgatgctacggaggcacagggtggcagacggcggagagaccaccacgagg
agacggaggagggagaggggaggaagaggaggaggaagcaggaggacgggggtgtgggag
tggtatcttgattctcctcctcttcctctccctcctcttactcaccatcccgccatctct
cccgtggttgcggaggacagtggggagggagaagacgtggagcagcagaggatgaggggg
ggggcagatgtggctgagcgtggggtgatatttgagggactgacggggctggggggggca
gtggcagcagcccccaatgaccgggcctcacggcggctgatgacccgtctggcggcaagg
cagcggttgcagcgagaaggcggaactgtgcggcgactgagggagagagagactgtggcc
ttccgccgcgccctctaccgctgcggcatacgggtccgcggcgtcgccggggtcagcggt
aaccaggggcagcagtgtgacatcacagcagagagcttccgtcgtaaccccggccacctg
aacagactccgcccctggctgcggcgggagctcaccgtgctgtacggtgcacacggcacg
ctggtcgacatcgtccagcgcatcatcatggcgcagctggcccgccacggcctggaggac
acacccaccatcgaagaagagctgcgaccgttcctgttggctcgtaccgaccacttcctg
cacgagctggtcagcttcgcccgctcgccacttagtctggaaaattacgacctgcaggcg
gtgtacgagccgctggccgccacccttgagctggacaggaccagcagcccctccgacagc
agctccgtcatcgccatatcagagggggaggaagaggagagccgggcgggaggaaggtcg
gaggagagggcagggggcgctcacaacgatgtcatcccaacaggaagctgccttagcctg
tcagcctgggacgacgaaacaccgggcccctcctactccaccgccgagtcgtcgtgttcg
ctcgccccgctgtcattcagccccgccccacaggggacagccaacgaggaggggggagag
aagcgggaagaggaggcggaggacgagtgtctgatcgtcgggtacaagaagcccatcgcg
gagcggactcctgagctggtgcagctctcctctgacaccgaggaagaggaggacaaggag
aaaggggaggagaagacgggcgagaagcttcctcccctcccttccaccactcctcctctt
tcttacctacccacaatccctccctccacatctcatgcctaccgcgaggagcaggacaac
aagccgaaggagaaagatggcgaggcgggcgggcgtcactcacgtacacgcttgtggtcg
ggcagctctggacgaagcctggagtctgtgtgcacgctcagcccgaaggagcagcggcgg
gaaagctggagagacaggaagcagtccggcagcgaggtggtgagggagaagaggaggagg
aagaggaggaggagagggcgggagaggagcggcaccctgttcaacccaaaccgctccatt
tatcccgcaatgatgcgccgccgctcccactccccctcaccgtttcataccagcgttgag
tccggttcgccgctgccgcccagcccgcccgactccagctgggagtaccactgctcccct
ctcacctcctctgtgtcctcaccgtcccgctcctcctcctcctcctcacccctcggctcc
tccccgcagccgtcgtcgccgccaccgcagacgccgccgacgccctcgctctccccaggc
aacgcctaccacagagaaaaacctggcgggaagaggaagtacaagagccgccacctggac
agcaatgacaaggaccccacctggaggccgagcagcagcctccgcagggagaagaggagg
gagaggggggagaaggagaggaggaggaggagggggagagatggagggaggagaagagag
aggcccaggagggaggctcacagggagagcgctagttattgtggagagagcagcagcagc
aggaggtgcagagacgaccggagtcccagcgtggaaatcatctacgagggcaccatcgcc
tcccacgaaacacaacctcccacacgaaaacgccgcaggaaacaccaccgcaaaatacaa
cacagcagttctccggttatcatcacccttgacagcgacagcagccacgacgccaacaaa
aacagtaacagcagcagtccgctcagcagccagcagaccgttgatttctccgaccttcct
cctctcccattggtgcattctgccggtgtgggtggggccttggatgcagaaattggcgag
cttcctgttgacatcctagatcgaggatctgacgggtcggagaccgagccagctggccag
tctgaggctgcaggccccatcgccattgataacagcgacaacagcgatcatgatgtggac
gtggaaaacgttgaagagattggttcactgctagggtgcgatcacggaccaatcagaaag
gccgatacaaaggcaacccctgctaataatccaagagaagcaactagtgtcgacggtggc
tctcaacaaacgggaggcaacgattctgcccccagaatgacggattttcgcaaaagaaac
tttgaagtctcgacctctgacagctttctgctcacatccatccccaatgacctgaaggga
atcgctgcacctggttgtgacctttctttgaactttgagcgcagttgctcacctgacacc
agaagaaagcgttttcgggatccgtgtgaggccagttgggctcattcgtaccggggtggc
tggttggctgagacgagacatcccagttgcgatttgcccgaggagccacagtctaacgac
gtcagagaccgaaacctggacttggacttgccgacatgtcatacctcaaaccccctgccg
cctcctattcagcagctgaaggagtgcagagtcagagaggggggtgtggacatccctcca
cgcttgaaacaggccagtcctgtccggtcgtacaacagaaacacgccaccgccgttaaaa
cacaaagatgtcgggagtccacacctgtcacccatctcccccgttgacctccacgcactt
cacgcctctgttgacttcgacccagttggtgtaaatactcccgttgacctcaattcaaat
cccaccgtctcccatgttgactctcgtttggttcctgagctgcccagacataaccaggcc
atcccccccatttcaacgctgaagaaacatttcacgagcgctttggcattgagaggagag
ctgccccctactggcagcaatccagccgttgacatgcattcttcctgtcttttagcaccc
gtcgactcccatgcagctgctccctccggagtcagagcattcaacaccagcatccattcc
acaagtcacaagcctcccgttgagacccattcatcttctgggtccggaaagagttccaca
agtgctgattgcttaccagatctggacttcttgaatagttttcattcttcaaagctacat
tccagccgtgatagcacaaaggcaatgccttcctgtggtcttagatcttcacccattaat
ttgcatcctgtgaattctttatctcccattgatttccattctgccaagaccggctggtcc
aaagagaaaccagccaacaccgactctacctccagaggttgcaggaatacgactttaatc
ccgaattcctgtcgggtagtacccgttgacctccatctttccagcggtgtctctgcaggt
agtggtgttttctcaggagtcaattctaacgacacatcacctgctgttttggtttcatcc
cttgattccaggactcaaaatccctcaccacccactgactcccactcctccaataaaaga
gagaacctgtcgcaaaggcttggaattagctcactgccgacaacagctcccagcggcagg
ttgtcaccgattgacctggaccctagaagtcccaaatctaccgttgacctccactcttcc
ggtgtagcttcagaaggactgacagacagcaaggagtcgtcaacggtcaatcgtcaggat
atatcagctcttggtcacccgccacccgtcaatttgcattgtacaagtcctttgccacct
gctaacttacattcttcctactttagcaccactgccatagacggacacttcaaccacaca
gccttaccatcctctaccttcaacacatcacatagaaagtgcagttctcgatcccaagct
accgtcgaatcccgctcaaaacatcgcaaccacgttggtcccagctccgacccacagttc
cccaacgacaaccgctcagcacatggtctccccgttgacgctcattcaaaaagctctcgg
agagactgtcagctccacgcagacaatcacatcacgtcttccccccagtctgtcgagaac
cagtggaactcggactccttcattgaagcccattcggactctcagtcggccgttgacgaa
cactcagccagcagtgtttggaccacacacacacaccccgccacgtag
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