Xiphias gladius (swordfish): 120797886
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Entry
120797886 CDS
T07311
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xgl04990
]
120797886
Domain-containing proteins not elsewhere classified [BR:
xgl04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
120797886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
Ig_2
TSP_1
I-set
CarbopepD_reg_2
CarboxypepD_reg
Ig_5
ig
V-set
Prok-E2_C
Motif
Other DBs
NCBI-GeneID:
120797886
NCBI-ProteinID:
XP_039997623
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All DBs
Position
LG1:complement(21665475..21680016)
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AA seq
1163 aa
AA seq
DB search
MSLWPLLLILGITSATVVTAQGSWRKDNKEFSPAVYHSDENYEWTTWFNVDHPGGRGDYE
QLDAIRFYYRARVCETPRAIEARTTEWVPARETGEKVHADPTVGFWCLNEEQAPESNCSN
YAVRFLCPKDKSENIQSTWGAWSDWSPCPALCGQVGVQLRSRNCQSHSMPCSGPKVEGKA
CNGPECPKTDCSLQCVMGRVNAECDTCMCEEHILLGSVRGAGGLTAEGAVILRYGKLLTL
TDHNGHFRIPGICPDGNTSLTFSLQGHANLNVVVPTSAERTSVLSVQLKRTEKLQVLSNP
VSKARRQGQTAAFCCKVAGTPQPDKYQWFHNNSLLEKQSENTLVLKDLHPEQAGEYYCRA
SGPSGAIKSKPATLKVLGRNEHSCNPKPDSHLIRLPHDCYQNSTDSFYYDVGKCPSSTCA
GQLDNVIRCKDKVAYCCGVEKMEERQLTCQGYQLPTMVVTECGCQKCVDTKAIVHGRAIA
ADNGEPMRFGHIFMNGVRISRTGYKGAFSIQVPQDTERLVLTFVDNMQKFVNTTKVLPFN
SKGGAVYHEIKLLRKKAPVTISPTETNTLELGEMEGQEAMVQIQIPPHSFYKENGEVFTG
NVNASVTFLDPRDMSTAAAAQSDLNFVGDEGDTLPLRTYGMFSVDFRSEENNEPLNAGEV
KVFLDSAQVKMPEHLNTMKLWSLNPDTGLWEEEGSLQVEKKRRGKREERTFLIGNMEIRE
RRLFNLDVPENRRCYVKVRAFRSERFMPSEQVEGVVVSLINMEPAAGYSSNPRAWGRFDS
VITGPNGACLPAFCDEQKADAYSAYVMANLGGEELEAVPSAPKLNPNLIGVPQPYLGKLN
YRRSDHEDPRVKKTAFSINVAKPSANTAEEGNGPVYAFEKLKECEEAPFSAAHFRFSRVE
GDRYDYNTVPFNEDDPMSWTEDYLSWWPKPMEYRACYIKVKINSPHEINVRSHNMGGTHP
KTVGQLYGLRDTRSIRDMDQATLSAVCVEFKCSGMLFDQERVDRTLVKVIPQGSCKRDHV
NAILQDYLVNHLPLAVNNDTNEFTMLAPLDPLGHNYGIYTVTDQDPRTAKEIALGRCFDG
TSDGTSRVMKGNEGVALTFTCGDREVNHQSVFQARQNSPGQTITSVVRGEGRQNRRRQRA
NAPRSSRRRSTRNPTGRRTKATS
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgtggcctcttctcctcatcctgggaatcacctcagccactgttgttactgct
caagggtcatggagaaaggacaacaaagagtttagtccagctgtctaccactctgatgaa
aactacgagtggactacatggttcaatgttgatcaccccggaggtcgtggagactatgag
cagctggatgcaattcgcttctattaccgtgcccgggtttgtgagactccacgggcaatc
gaagccagaaccactgaatgggtcccagcccgcgaaactggcgaaaaggtccatgcagac
cccactgtgggcttctggtgcctcaatgaggagcaagctcccgaaagcaactgctcaaac
tacgcagtccgcttcctctgtcccaaagataaaagtgagaacattcagagtacctgggga
gcgtggtcagactggagcccatgccccgccctctgtggtcaagtgggggtccaacttcgc
tccagaaattgccaatctcactctatgccttgtagtggccctaaagtagaagggaaagca
tgcaatggacctgagtgcccaaagacagattgctccctgcaatgtgtgatggggagggtg
aatgctgagtgtgacacatgcatgtgtgaagagcacatcctattgggttctgtacgtggt
gctggaggtctcactgctgaaggggctgttatccttcgctatggcaagcttcttaccctt
actgaccacaacggacatttccgcatccctggtatctgccctgatggcaacacttcgctg
acattcagcctgcagggtcatgccaaccttaatgttgttgtgcccaccagtgctgaacgc
acctcagtcctcagtgtccagctaaaaagaacagagaagcttcaagtgttgagcaaccct
gtgagcaaggccaggaggcagggacaaactgctgccttctgctgcaaagtggcaggaacg
ccacagccggacaagtaccaatggtttcataacaacagtcttctggagaagcagtctgag
aacaccttggtcttaaaagatctgcatcctgaacaggctggggagtactactgcagagca
agtggtccatctggggctattaagtccaaaccagctacactcaaagtcttaggtagaaat
gagcattcgtgtaaccccaagcctgattcccacctcatccgtcttccacatgactgctac
caaaacagcacagactcgttctactatgatgtgggcaagtgcccctcaagtacatgtgct
ggacagctggacaatgtcatcaggtgcaaagacaaagtggcttactgctgtggtgtggaa
aagatggaggagaggcagctaacatgccagggctaccaactccccaccatggtggtgact
gagtgtggctgccaaaaatgtgtggataccaaggctattgtgcatggtagggccattgct
gcagataatggagagccgatgaggtttgggcatatctttatgaatggagtcagaatcagc
cgcacaggctacaaaggggccttctccatccaggtccctcaagacacagagaggctagtc
ctgacttttgtggacaatatgcagaaatttgtcaacaccacaaaagtacttccatttaac
agcaaaggaggggctgtttaccatgagatcaaacttctgagaaagaaagctcctgtcacc
atcagccccacagaaaccaacactctggagcttggggagatggagggccaagaggcaatg
gttcagatccagattcctccccattccttctataaggagaatggagaagtcttcacgggt
aacgtcaatgctagtgtaacgtttctcgacccaagagacatgtccacagctgctgcagct
caaagtgatctcaattttgtaggagatgaaggagataccctgccactgcgaacctatggt
atgttctcagttgacttcagaagtgaggaaaacaatgagcccctgaacgcaggtgaagtg
aaggtgttcctggattctgctcaggtgaagatgcctgagcacctcaacaccatgaagctg
tggtcactgaaccctgatactggcttgtgggaggaggagggaagtctgcaagtggagaag
aaaagaagaggcaaaagggaggagagaacctttctgattggtaacatggagatcagagag
agacggctgtttaacctggacgtcccagagaaccgcaggtgttatgtgaaagtgagggcc
ttccgcagtgagcgctttatgcccagtgagcaggtggagggtgttgtggtgagtctcata
aacatggaacccgcagctggctactcctctaacccacgtgcctggggacgatttgatagt
gtcatcactggtcccaatggtgcctgtcttcctgccttctgtgatgaacaaaaagctgat
gcctactctgcctatgtcatggccaaccttggcggggaggaactggaggctgtcccttct
gctccaaaactaaatcccaacctcattggagtgccccagccttatctgggtaaactgaac
tacaggcggtctgaccatgaagaccccagggtgaagaaaacagcattcagcatcaatgtg
gcaaaaccaagtgccaacacagccgaggagggcaatggaccagtgtatgcatttgagaaa
ttgaaagaatgtgaggaggccccattcagtgcagcacacttccgtttctcaagagtggaa
ggagatcgctatgattacaacacagtcccgttcaatgaagatgacccaatgagctggaca
gaggactacctgagctggtggccaaagcccatggaataccgggcctgctacattaaagtc
aaaatcaacagcccacatgagatcaacgtgcggtcccacaacatgggtggcacccatccc
aagacagtgggccagctttatgggctccgagacactcgcagcatccgtgacatggaccag
gcaactttatcagctgtgtgcgtggagttcaaatgcagtgggatgctgtttgatcaggaa
cgtgtagatcgtaccctcgtgaaggtgattccacaaggaagctgtaagagagaccatgtc
aatgcaattcttcaggattatctggtcaaccacctgcccctagctgtcaacaatgacacc
aatgagttcaccatgctagcgcctcttgaccctctgggccataactatggaatttatacg
gtgacagaccaggatccacgcacagccaaagagattgcacttggacgctgctttgatggc
acatccgatggtacatctcgtgtcatgaagggcaacgagggcgtagcactgacgttcacc
tgtggagatcgtgaggtgaatcaccagagtgtcttccaggcccggcagaattctccaggt
cagacaataacaagtgtcgtgagaggagaaggaaggcagaaccgacgccgacagagggcc
aatgcaccccgcagcagtcgaagacgtagcacgagaaatcctacaggaagacgcacaaaa
gctacgagctaa
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