Xiphias gladius (swordfish): 120797999
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Entry
120797999 CDS
T07311
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04136
Autophagy - other
xgl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120797999 (atg13)
04136 Autophagy - other
120797999 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120797999 (atg13)
03029 Mitochondrial biogenesis [BR:
xgl03029
]
120797999 (atg13)
Membrane trafficking [BR:
xgl04131
]
Autophagy
Autophagosome formation proteins
ULK complex
120797999 (atg13)
Atg1 complex
120797999 (atg13)
Mitochondrial biogenesis [BR:
xgl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120797999 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
120797999
NCBI-ProteinID:
XP_039997807
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All DBs
Position
LG13:complement(7015644..7024328)
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AA seq
540 aa
AA seq
DB search
MDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLSGLGEGFQTVRVGVVGTPV
GTVTLSCAYRTNLAFMSNRQFERSVPIMGIIVDHFVDPPCSSQRAANMGQPCNYRAPDEE
DGPFAGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLSKPLPLDSLQLPLAPGLVTHTLY
TSRLSYQPPALAGAAELCHPAANPNQVLHAGKEGGVVLVPAHPPHGADAHLTVEHAPNTP
GSSGDDDGLSQSVEGRRDEGRRSVSPSDPVESLNAFTRKVGAFVNKPSTQITAASLDLPF
AAFAPRGLDSEENDPMVRPPLSPTCPSPLQASLHSQGSEGSGQQDDFVMVDFRPAFSKDD
LLPMDLGTFYREFQNPPQLASLSLHISSQSMADDLDSLPEKLAVYEKNIDEFDAFVDMLQ
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgacctaagtccccaggataaaaaggacttggacaagttcattaagttcttt
gcgttgaagaccgtccaggtgatagtccaagcccgtcttggagagaaaatctgcactcgc
tcttcctcatcacctacaggctctgactggtttaatttggccatcaaagacatcccagag
gtgactcatgaagccaagaaggcactggccggccaacttcctggcattggacgctccatg
tgtgttgagatctccctgaagacatcagagggtgactcaatggagttagagacttggtgc
ctggagatgaatgaaaagtgcgataaggacatcaaggtgtcatatactgtatacaaccgt
ctttctgtccttctgaagtctctgctggccatcaccagagtaacacccgcctataaattg
tccagaaagcagggacacgactatgtcatattatacaggatctactttggggaagtccag
ctgagtggattaggggaaggttttcagacggtgcgcgttggtgtcgttggcaccccggtt
ggcacagtcacactttcatgtgcctaccgcaccaacctggcattcatgtctaacaggcag
tttgagcggtcagttcctatcatggggatcattgtggatcactttgtggatcctccctgc
agcagccagcgtgctgcaaatatgggacagccctgcaactacagagctcctgatgaggag
gacggaccatttgcaggagttcaggattcacaggaggtctgcaccacctccttctccact
tcccctccctcccagtgtgtgtgtacactgagtccgtctccttctaaactgtctaagccc
ctccccctggacagtctgcagcttccattggctcctggacttgtcactcacactctgtat
acttccaggttatcctaccagcctccagctctggcaggagctgctgaactctgtcaccct
gctgccaacccaaaccaggtgttgcatgctgggaaggagggcggggttgtgttggtccct
gcccatcctcctcatggagcagatgcgcacctgacagtggagcacgcccccaacacacct
ggcagcagcggtgatgatgatggtctgtcgcagagcgtagagggaaggagggatgagggg
aggaggagtgtctctccctctgacccggtggagtctctcaatgcgttcacgaggaaagtc
ggagcctttgtcaataaacccagcacacagataacagcagccagtctggacctgccattt
gctgcatttgctcctcgaggcctggactcggaggagaatgatcccatggtgcggcctcca
ctctccccgacctgcccttcccccctacaggccagccttcattctcagggctcagaggga
tcagggcagcaggatgatttcgtcatggtcgactttcgacctgccttctctaaagacgac
ctgttgccgatggatttgggcaccttctacagagagtttcagaaccctcctcaactggcc
agcctctcactacacatcagctcccagtcgatggccgatgacctggactcgctgccagag
aaactggccgtctacgagaagaacatcgacgagtttgacgcttttgtggacatgctccag
tag
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