Xiphias gladius (swordfish): 120798108
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Entry
120798108 CDS
T07311
Symbol
zc3h13
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 13
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120798108 (zc3h13)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
120798108 (zc3h13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
zf-CCCH_DUS3L
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
120798108
NCBI-ProteinID:
XP_039998079
LinkDB
All DBs
Position
LG13
Genome browser
AA seq
1816 aa
AA seq
DB search
MSKIRRKVTVENSKTISDSSSSTTTSSTSNPTAPSRRPSVFERLGPSTGSNAADSHCRNW
LKTGNCSYGNTCRYTHGSQPRGKGFSFSRSTERPTGDLRERMKNKRQDVEPEILKRDLDE
PTSPTARQRDSSRGRHREKEDIKITKERTPASEEEPAEWETNREDSDIGDYDYELSLEMK
RQKIQRELMKLEQENLEKREDIVIKKDETPIKTRTTSLPKASPEQLSSKDSPSSRKSSGS
PKHKSGAKGPGSGKKEKKASIPSPVSESARTSKGSHSKKKGPRTPSPPPPVPLDIPVIGK
KHKGKHKNKEKSEEKQKEGKDRGRDTEKHKEKKEKRRDRSDSSHKAKRSVTSEERSGSVS
SPSRGASPSVRKKSTSPKASSHKTSALASPPRRSPSPPRHHRSPTPSRHHSPSSHSGSSA
QRHSPSPRRRRSSSPAYHRSTAAASASSPQSSRRSRSPPASHDTSSPHRRSDRSSPSRHH
SRGRERSRGDRDRSPPVQERRHERRDDSRSKREKDSVRDDRDYDSEQHSSRDARDDRETR
EARERRDARDRGRETTRDSRDHRDNRDIKDSRESRTETRSSRESLERRDREREREREREK
EREKDREREKERERERTDTHRKEDTAQDDRSYGRGHGRDDGGRAEGRAENRTDRAERNGR
GRGRANETSDKGSNRNSRGSQLESTHDNWESRSSAVRERSVERSTDRSATERSSERGSDR
DRYDGDRRGEQARDSSYDRRGGHGERDRRDNRERDQRVASPNRHQGRSEESEREDRREER
RTDRVEERRDDRTRDRERERERERDREREREKEKDREREREREAAERERARERERERERE
REREREREREREREREERERERERKEREREREREREQRERERQREWEERERGREERRERR
EDPREDRSVRDTRDDRKTSRKRPRVESSPSPRPSPKRSTRDLSPADSDGYNSAEDKCGDK
HRLLSQVVRPQEPLLRSPPRAAPSDDKLSHWKDEERRGAVEKREARSRHEDLEPQRERGR
VGDRRGDHLSDTPSDSRSRGRDQRESTPPPPPPSALTTGSEDRDTAGSQSHEEGKKKTKS
QRKGLKKGRKDEEISGANSLAAVGDRFNLEPPTGASADGPPPLHSPRKVAKKKALDRKRK
RSRGGESDVSEEDQPHSKRKRGPRTPPPSLRPDHRGTGGNAEPSPLSKMDNFSDWSDEEV
TVRGGGPLETQAPLAPAEPLRRAGGPRVGRDRERCNPPPIAPLLSQDPPMLLQTLTPQPL
MSQPLLHPQTHSLXGSNQSRTSSRRLPQPTPRSGSQDYRHRTGXRERERERERERERERE
RERPVVNDPPGAERKSRIDQLRRGEPSRSTSSDRQDSRSHSSRRSSPDSERQTRSRSRAG
SYDSREREREREPFERERDRKDLRPQQQQQQQQPLLLQQPLQQQRDWEPEPRDWPSRGRE
PLLMRPSREPLLRERDIRDRERLLPEGLIQQHERERERERERERERDSRGERGGDRERER
IMMMMDLPPHGDPRAPGRGDLRGEMRGDPRGDMMRQDRNDYEPLLPREAFSPPEPEKGSN
SHHLMGEQRERELEKADSIDGDDDVKEDDGQSVASVGEEYEPISDDELDEILADSQKKED
QQDDEKITGPVDVIDVDWSSLMPKQKQEPRAAGAALLRFTPGAVLLRAGISKRLAGPELL
EQVREVCKSELDDPKDADKLFEHDLGALNMAALNRRVERAGLLSNLGPCCKGLCARRDFA
IRRQLLKNDKGLTKQYPTTPVVDNELLQMSMRLFRRTVAGQASAPERSDSGPATAAEVAA
AGSSKLGTAQPEVCVS
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatcaggcggaaggtaacagtggagaattcaaaaaccatatctgacagcagc
agcagcaccacaaccagcagcaccagcaaccccaccgccccctcccgcaggcccagtgtt
ttcgaaagacttggccccagcactgggagtaatgctgctgatagtcactgtagaaattgg
ttgaagaccggtaattgcagttacggcaacacttgtcgctacacacatggaagtcagcca
cgaggcaagggatttagcttcagtcggtcaaccgagagacccacaggtgatctgcgggag
aggatgaagaataaaagacaggatgttgagccagaaatcctgaagcgagacctagacgag
cccacatccccaacagcaagacagcgagactcctccagaggccgacacagggagaaggag
gacataaagatcacaaaggagcgcacaccagccagtgaagaagagcccgcagagtgggaa
accaatcgtgaagactcagatatcggtgactacgactacgagttatccctagagatgaag
cgccagaagattcaacgtgagctgatgaaactggagcaggagaacctggaaaagagggag
gatattgtcatcaagaaagatgagacccccatcaaaacaagaaccacctccttgccgaag
gcctcaccagagcagttaagctctaaagattcaccgtcatccaggaagtccagtggctcc
ccgaaacacaaaagtggagccaaagggccaggctctgggaagaaagagaagaaggcgtcc
ataccctcacctgtttcagaatctgccaggacttcaaaagggagccatagtaaaaagaaa
gggccccgtacccccagtcctcctcccccagtccccctggacattcctgtgatcgggaag
aaacacaaaggcaagcacaaaaacaaggagaagtctgaggaaaagcaaaaggaagggaaa
gatcggggacgagatacagaaaaacacaaagagaagaaggaaaaacgcagggaccgatca
gacagttcccacaaagccaagcggtcggtcacatcagaggagcgctctggtagtgtgtcg
tctccttccagaggtgcttcgccctcagtccggaagaaatccacctctcctaaagcttcg
tcccacaaaacctctgcactggcctccccgcctcgcaggtctccctctcctccacgccac
caccgtagccccactccttcccgccaccactccccttcctcccactctggctcctctgcc
cagcgacactctccctctcctcgtcggcgtcgctcgtcctctcccgcctaccaccgcagc
actgcagcagcctccgcctcctcacctcagagctccaggcgctcccgatcgcccccagcc
tcccatgacacctcttcgccccaccgccgatcggacagatcgagccccagccggcaccac
tccaggggccgcgagaggagtcggggtgatagagacaggagtccgcctgtccaagagcgc
agacatgagcgtagagatgatagccgaagcaagcgagagaaagacagtgtccgtgacgac
cgggactatgactctgaacagcactcatcacgagacgctcgcgacgacagggagaccaga
gaggctcgtgagcgtcgggacgctcgcgacagaggaagggaaacaaccagagactctcgc
gaccacagagacaacagggacataaaggactccagagagagcaggacagagacccggtcc
agtcgagagtccctggagcggcgggaccgcgaaagggaacgagagagggaacgggagaag
gagagagagaaggacagagagcgagagaaggagcgagagagggagaggactgacacccac
aggaaggaggatacggctcaggacgacaggagttatgggagaggtcatgggcgtgatgat
ggagggagagctgaagggagggcagagaacaggacagacagagctgagaggaatggacga
gggagagggcgtgctaatgaaacatctgataaaggctcaaacagaaactcccggggttcc
caactggaaagcacccatgacaactgggagtcacggagcagtgcggtgcgcgagcggagt
gtggagaggagcacggatcgcagcgctaccgaaagaagctctgagaggggttcagaccga
gatcgctatgacggtgacagaagaggagagcaggcccgggactcttcttatgacaggaga
ggagggcatggagagcgggatcgcagagacaaccgagagagagatcaaagagtggcttcc
ccaaacagacaccaggggagatcagaggagtctgagcgggaggacaggagagaggagcgc
aggacagatagagtggaggagagacgggacgaccggacacgcgaccgggagcgagagaga
gaaagggagagggaccgggagcgggagagagagaaagaaaaggacagagagcgggagagg
gagagggaggctgctgagagggagcgggccagggaaagagaacgggagcgggaacgagag
agggagagagagcgggagagggagcgggagagagaaagggagcgcgaggagcgggagaga
gagagggagcggaaggagcgagaacgggagagggagcgagagagggagcagcgggagcgg
gagaggcagcgggaatgggaggagagagagagaggaagggaggagaggcgggagaggaga
gaggaccccagggaagatcggtctgttcgagacacccgagacgatcgcaagacaagtcgt
aaaaggcccagggtggagagcagcccgagcccccgtccctcgcctaagcgatcaacacgg
gacctcagtccggcggacagcgatggctacaacagtgcagaagacaaatgcggcgacaaa
catcgtctgctgagccaagtggtgcggccccaggagcccttgttgcgttctccaccgagg
gctgctccatctgatgacaagctcagtcactggaaggatgaggagcgcagaggagccgtc
gagaaaagggaagcacgcagccgccacgaggacctagagcctcaacgggaacgtggcaga
gtaggcgacagacgaggagaccatctttcagacaccccgtctgactcccgtagcagaggc
agagaccagcgagaatccacgccgccgccccctcctccttcagccctcaccactggcagc
gaagacagagacactgctggctcgcagtcccatgaggagggcaaaaagaagacaaagtca
cagaggaaggggctgaagaagggtcgcaaagatgaggagattagcggtgccaacagcctg
gctgctgtaggggaccgtttcaacctcgagcccccgactggtgcttctgcagatggacca
ccacccttgcactctcccaggaaagtagcaaagaagaaagcacttgaccgaaaaagaaaa
cggtcccgaggtggagaatctgatgtatctgaggaggatcagccacatagtaagaggaaa
agaggtccccggaccccaccaccttcgttgaggcctgatcaccgcggtactggaggtaat
gcagagccttctcctctgtccaaaatggacaacttcagtgactggtcagatgaggaggtc
acagtccgaggaggaggaccactggaaacgcaagctcccctggctcccgctgagcctctt
aggagagctggtggtcccagggtgggcagggacagagagaggtgcaaccccccacccatt
gcccctctactctcccaggatcctccaatgctgctgcagactctgactccacagcccctc
atgtcccagcccctgctgcatcctcagacccacagcctcnatgggagcaaccagagccgc
acatcatcccgacgcctgccccaaccgacccccaggtcagggtcgcaagactacaggcac
cggaccggannacgagagagggaaagagaacgagagagggaacgggagagagagcgggag
agggaaaggccggttgtaaatgaccctcctggggctgagaggaaatctcgaattgaccag
ttgaggagaggagagcccagccgtagcacctcatcagaccggcaggattctcgcagccac
agctccagacgcagctctcctgactccgagaggcagaccaggtccaggtcccgcgccggc
tcctacgacagtcgggaacgggagagagagagggagccgtttgaacgggaacgagaccga
aaggacctccggcctcagcagcagcaacagcagcagcagcccctgctcctccaacagccc
ctccaacaacaaagagactgggagcctgaacctagggactggcctagcaggggacgagag
cctctgctcatgcgtcccagccgtgaacctctccttagggagcgggacatcagggacagg
gaacgcttactccccgaaggactcattcagcagcatgaacgggagcgggaaagggagcga
gagagggagagggagagagacagtagaggtgaaagaggcggcgatcgcgagagggagagg
ataatgatgatgatggacctaccaccccacggggaccccagggctccaggacgaggggac
ctgagaggggaaatgagaggagaccctcgaggggacatgatgaggcaggacaggaacgac
tatgagcctctgctgccaagagaagccttcagccctccagagccagagaaagggagcaac
agtcaccatctcatgggagagcaacgggaacgggagctggagaaggcggacagcatcgac
ggagacgatgatgttaaagaggatgatggccagtcagtcgcatctgttggagaggagtat
gaaccaatcagtgacgacgagctggatgaaattctggctgatagccagaaaaaagaagat
cagcaggacgatgagaaaattacaggtcctgtggatgtgatcgatgtggactggtccagc
ctgatgcccaagcagaagcaggaaccccgggcagcaggggcagcattgctccggttcacc
ccaggggctgtacttctcagggctggaatctccaagcgacttgctgggcctgagctcctg
gagcaagtcagagaggtgtgcaagtctgagctggatgaccctaaagatgctgacaagctg
tttgagcatgaccttggggccctgaacatggcggccctgaacaggcgggtggagagggca
ggattactgagcaaccttgggccctgctgcaagggcctgtgtgcccgcagggactttgcc
atccgcaggcagctgttaaaaaatgacaagggcctaaccaagcagtatcccactacaccc
gtagtagacaacgagctgctgcagatgagcatgcgtctcttcagaaggaccgtggctggc
caggcttcggccccagagaggtccgacagtgggccggcgacagcagccgaagttgctgca
gctggtagtagtaagctcggcacagcacagcccgaggtgtgtgtgtcctga
DBGET
integrated database retrieval system
