Xiphias gladius (swordfish): 120798247
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Entry
120798247 CDS
T07311
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120798247
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
120798247
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
UBA_N4BP1
UBA_N4BP1_C
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
120798247
NCBI-ProteinID:
XP_039998334
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All DBs
Position
LG13:complement(7561356..7578007)
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AA seq
974 aa
AA seq
DB search
MGQKDHVEAGAGHIFDLGLDLEYLHVAGADRQAGGADGPPAMEEQGESSGNSSTANSPPP
PTVEENAGPDTECKPAPSTGSTLTAGPDADGGEGGSTHSKNTHQPLCRTQCVDLGTEGPP
EPPSELLSELEHDTPAQSPPSSPCKNPLEPVANPSKSEPASEAGGKEYQAKLEFALKLGY
SEETVRLVLSKLGPDTLINDILGELVKLGTKSDSEQPAGSLASTSSSSSSSSSCGCSDLL
DGVRSDSPCPSDSLGDQDNLRPIVVDGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHHDI
TVFVPAWRKEQSRPDAPITDQEILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYE
SDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKR
PVMPEQKKQPCPYGKKCTYGHKCKYYHPERGAQPQRAVADELRASAKICVTTKNQGDTGL
VKSHSVPAGSIEAKKGAPKRQSDPSIRALSYSDAEEKLLAKGRVESQKSSLCGGNSGSSS
SSSSSSCSGSITMSPAPGGPPSGLSLPQDQQSRAATPHGHLPTPGHDLYPHCESPDLSYY
SVTRAYSGLSLSSRRSPDCRFPNDTDLRLGSMGSAGSECGSESSASCGSNCDSYSERPCP
GCPPDTLLEENIHFPNPHSRLYPHHAASNHELCGLHPADYTNIQQSHTSNSGVHGYHLSV
ARVQSCAHDQPPPEAPPKRPLYPLPPHLQHQPLAARSSCPGDYHSLPQTNPLPPGSPLGR
CLAPTRAESVSDSHLYEHLSTSHHHHRPKALPSWDTYYRQPPLPLSRYEPSAYQSLPDTR
QSSWHTPPWTQDGYAQHHSSYPALHPSPTHYLNHPPPPAHSPHPPHPSSAPLPPYPPHSA
HLSVPSHATPSYMPQHSESPAHSRYGDVREKVYVNLCNIFPPELVSRVMARSPHITDPQQ
LAAAILAEKAQTGY
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagaaggaccatgtggaggcaggagcaggccacatcttcgacctggggctggat
ttggagtatctccacgtagcgggggctgaccggcaggctggcggtgctgacgggccccct
gctatggaggagcagggggagagctccggtaacagcagcaccgccaattcccctccaccg
cctacggtggaggaaaatgctggacctgacacagagtgcaagccggcgccgtctaccggc
tccaccctcactgccggccctgacgcggatggaggagagggagggtcaactcacagtaag
aacacccaccagcctctttgtcggacccagtgtgtggacttgggcactgaggggcctcct
gagcccccatctgaactcctatcagagcttgaacatgacactcctgcccagtccccaccc
agctccccgtgtaaaaacccactcgagcctgtggccaatccctccaaatcagagccagca
tctgaggctggtgggaaggagtaccaggctaagctggagtttgccctgaagctgggctac
tctgaggagacggtgcgactggtgctgtccaagctgggccctgacaccctcatcaacgac
atactgggagagctggtcaaactgggcactaagtcggacagcgagcagccggctggatca
ttagcctctacatcatcttcttcgtcctcctcttcgtcttgtggttgctctgatttgctg
gatggcgtgaggtcggactcgccctgtccttcagactctctgggtgaccaggacaacctg
cggccgattgtggtggatggaagtaatgtagccatgagtcatggcaacaaggaagtgttt
tcgtgccagggcatccagctggctgtagattggttcctagagcgcggccatcatgacatc
acggtgtttgtgcctgcatggaggaaagagcagtcccgccctgatgcccctatcacggat
caggagatcttgcgtcgcctagagaaggaaaagatcctggtgttcactccgtcacggcgt
gtccaaggtcggcgtgtggtctgctatgacgaccgcttcattgtcaagctggcttatgag
tcagacggcatcatagtctccaatgacaactaccgagacctggctaatgagaagcctgag
tggaagaagttcatcgatgagcggctgctcatgtattcctttgtcaatgacaaattcatg
cccccagatgaccctctcggtcgtcatggtcccagcttagacaacttcctgaggaaaaga
cctgtcatgcctgagcagaagaaacagccttgcccatacggaaagaagtgcacttacggc
cacaagtgtaagtactaccacccagaaagaggtgctcagcctcagcgtgctgtggccgat
gagctgcgagccagtgccaagatctgtgtcaccacaaagaaccagggagacactgggctg
gtgaaaagccacagtgttccagctggcagcattgaggcaaaaaaaggtgccccgaaaagg
cagtcagaccccagcatccgagctctctcatacagtgatgccgaggagaagcttctggct
aaagggagggtggaaagccagaagagcagtttgtgtggtggtaacagtggcagtagcagt
tctagcagcagcagtagttgcagtgggagtatcaccatgtccccagccccaggaggccct
ccatccggccttagcctcccccaggaccaacagtccagagcagccactcctcacggtcac
ttaccaaccccaggccatgacctttaccctcactgtgagtccccagacctgagctactac
tcagtaacgcgtgcctactctggcctgagcctgtcctccagacggagcccggactgtcgc
ttccccaatgacacagacctgcgtttaggctcgatgggctcagcaggctccgaatgcggc
agcgaaagcagtgcgagttgtggtagcaactgtgactcgtacagtgagaggccttgtcct
ggatgccccccagacaccctcctggaagagaacatccacttccctaatccccacagccgg
ctgtatccccatcatgctgcatcaaaccatgaactttgtggccttcatcctgcagattac
acaaatatccaacaaagccacacgtctaattctggcgttcacggttaccacctgagtgtg
gcacgcgtgcagagctgtgctcatgatcagcctccaccggaggctcccccgaagcgccct
ctctaccccttaccccctcatctgcagcaccagccactggctgcacgctccagctgccca
ggcgactaccactctctgccccagactaaccctcttccccctggctctcctcttggacgc
tgccttgcccccacacgagcggagagtgtgtcggactcacatctgtatgaacacctctct
acatcccaccatcaccaccgacccaaagctttgcccagctgggacacatactacagacag
ccgccattgccgctgtcccggtatgagccgtctgcctatcagagtctgcccgacacacgc
cagtcatcctggcacacccctccctggacacaggatggctacgcccagcatcactcctct
tacccagctctccacccgtccccgacacattacctaaaccacccaccacctccagcccac
tctcctcacccgcctcacccgtccagcgcccctctcccgccttacccaccccacagcgct
cacctgtcggtgccctctcacgccactccctcctacatgccgcagcactcggaatcccct
gcgcacagccgctatggggacgtaagggagaaagtgtacgtcaacctgtgtaacatcttt
cccccagagctggtgagccgggtgatggccaggagcccccacatcacagacccccaacag
ctggcagccgccatcctggcagagaaggcccaaacaggctactaa
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