Xiphias gladius (swordfish): 120798277
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Entry
120798277 CDS
T07311
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120798277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120798277
Enzymes [BR:
xgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120798277
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120798277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
TRIM_CC
PRY
zf-C3HC4
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
zf-RING_5
NDNF
Motif
Other DBs
NCBI-GeneID:
120798277
NCBI-ProteinID:
XP_039998390
LinkDB
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Position
LG13
Genome browser
AA seq
689 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILISHCATNESVQSIGAFQCPTCR
YVISLSPERGLEGLKRNVTLQNIIDRVQRASSSAGLPIPLPLPAPHSGPNSPGEEGSNRL
ALVPVSAAMSSPGTPPEPVQCQFCEQDPPQDAVKTCVTCEVSYCEECLRATHPNKKPFTG
HRLIEPMPDSHLRGLQCLEHEEEKVNMYCVTDDQLICSLCKLVGRHRDHQVAALSDRYEK
LRQALDSNLSNLIKRNNELESLMGKLIQTCQHVEVNASRQEGKLIEECDVLIDIIQQRRQ
IIGSKIKEGKTQRLRKLAQQISNCKQCIERSSALITQADQTLKETDHARFLQTAKSINER
VSMATASTQVLIPEIHLTDTFDTFALDFTREKKLLENLDYLTAPSAPCIREELCTASYDT
ITVHWTSDDEFTVVSYELQYAIFTGQSNIASLCNSLESWMIVPNIKQNHYTVHGLQSGTK
YIFVVKAINQAGSRSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETTSKKGHN
QERFTSQSSYGVVGNVFIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNSASWVLC
RCNNSWVVRHNSKELAIEPSPHLRRVGVLLDYDAGYVTFYDAVGSQHLHTFHVSFIQPVC
PVFNVWNKCLTVLTGLPIPDHLEGPESQN
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggacactctggagtcagagctgacctgcccaatctgcctggagctctttgaagaccca
cttctgctcccctgtgcccacagcctgtgctttggctgcgcccaccgtatcctcatctcc
cactgcgccaccaacgaatctgttcagagcatcggcgccttccagtgccccacttgtaga
tatgtcatttctctgagtccagagcgtggattagaaggacttaagagaaacgtgacctta
cagaacattattgatagagttcagcgagcctcatcttcggctgggctccctataccactg
cctctgcctgctccccacagcgggcccaactctcccggtgaggaagggagcaaccgcttg
gcgctagtccccgtcagcgccgccatgtccagcccaggtacgcctcccgaaccggtccag
tgccagttctgcgagcaggaccccccgcaggatgccgtcaagacgtgtgtgacatgcgag
gtgtcatactgcgaggagtgcctcagagcgacgcaccccaacaagaagccgttcaccggc
caccgtctcattgagcccatgccagactcccacctcagagggctccagtgtctggagcat
gaggaggagaaagtgaacatgtactgtgtcacggatgatcagctgatctgctcgctgtgt
aaactggtcggaaggcacagggaccaccaggtggcagcactgagtgaccgttatgaaaaa
ctcaggcaagccctggactccaacctgagtaatttgatcaagaggaacaacgagctggag
tcacttatgggcaaactgatccagacttgtcaacatgtagaggtgaacgcgtcccgccag
gagggcaagctcatcgaggagtgtgatgtcctgattgacattattcagcagaggaggcag
atcattggcagcaagatcaaggagggaaagacgcaaaggcttcggaagctcgcccaacag
atctccaactgcaagcagtgcatcgagaggtcctcagccctcatcacgcaggccgatcag
acactgaaagaaaccgatcacgctcgcttcctgcagactgccaagagcatcaacgagagg
gtttccatggcaaccgcatcaacccaagtgctgatccctgagatacacctaacggacacc
ttcgacaccttcgccctggacttcaccagagagaagaagctgctggagaatctggattac
ctcactgctccaagtgctccttgcataagggaagagttgtgcacagcttcctacgacacc
atcactgttcactggacgtctgatgatgaattcaccgtggtgtcctatgagctccagtat
gccatcttcactggacagtctaacattgctagtctctgtaactcattggagagctggatg
attgtccccaacatcaagcagaaccactacacggtacacggcctgcagagcggcaccaag
tacatctttgttgtcaaggccattaaccaagcaggaagcaggagcagtgaaccagggact
ctgaagaccaacagccagccattcaagctggaccccaaatctgctcacaagaagctgaag
gtgtcccatgataacctgacggtggagcgggacgaaaccacatccaagaaaggccacaac
caggagcggtttaccagccagagcagctatggtgtggtgggaaatgtcttcatcgacagc
gggcgtcactactgggaggctctgattggagggagcacatggtacgctgtgggtatagcc
tacaaatcagcccccaagcatgagtggatcggcaagaactccgcctcctgggtgctctgc
cgctgcaacaactcttgggtggttcgccacaacagcaaggagctggccatcgagccttcg
ccccacctgcggcgtgtcggggtcctgttggactacgacgccggatacgtgaccttctac
gatgccgtgggttcccagcacctgcacacatttcacgtctccttcatccagcctgtgtgt
cctgtgtttaacgtgtggaataagtgtttgacggttctcactggtctacccatccccgac
catctagagggaccggaatcccaaaactga
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