Xiphias gladius (swordfish): 120798281
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Entry
120798281 CDS
T07311
Symbol
zswim2
Name
(RefSeq) E3 ubiquitin-protein ligase ZSWIM2 isoform X1
KO
K15716
E3 ubiquitin-protein ligase ZSWIM2 [EC:
2.3.2.27
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120798281 (zswim2)
Enzymes [BR:
xgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120798281 (zswim2)
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120798281 (zswim2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
SWIM
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING-like
ZZ
GT-D-like
Motif
Other DBs
NCBI-GeneID:
120798281
NCBI-ProteinID:
XP_039998397
LinkDB
All DBs
Position
LG13:3584640..3596885
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AA seq
654 aa
AA seq
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MVRVHRGRGSSSKPTTACFIRHLRPQRTVSDVRVNRKQSTGVVSSDRMFRKTAWRNTVSD
ALSFRQDQALNTTIFLLKTYGPMGFLLREDGETRNFKVCLGDPHTCTCPVFTKEQEPCKH
IFWILLRKFRLPREHDYSFQNGLVDRQILEVLHGLHQTRPHRMENDPSADSGTPSQPVMG
QEAGSVCRKVIQAQDVCPICQEELLEKKQPVSHCRFGCGNNVHISCMKVWADHQKLSDTE
EMVKCPLCREDFSSLKLLKEQVKNAEKLFTAAEREKPERHLGVLCHICQVCPITGRCFKC
IVCSYFYLCEGCAKRGCHPQHQFASRTKRRDKWHLVAEDLSDEPKGATCQPANDSIMTVA
ADPLPENVLGCLPTVRVRSGSRLLDEGQQCRICLQNFTLGQRVRILPCHHKFHMDCVDGI
LRKTNSCPLDGYVIFNPLIWRTSERKTSHKLASCPSSDSGKPDHNLKDLFIPGTALRDRK
TRTAPPHGSLHLELLTGSSETFNIPQKLISDQFLGLCITTTDAAKKEGKGVLQKKQSLAF
PESSCFDQRSKSDSGDRQNTCSSKKTLAKCSSASPNMFVPVAKIREQPQVNLFVGFCRSE
ASHTATVAFPARRTTLQPRRRGPITAQVTNKKPTSELRMTGVSINTQHHRNTET
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgcgtacaccgtgggaggggaagttcgtctaaaccgacgaccgcgtgtttcatc
cggcacctgaggccccaacggactgtttcggatgttagagttaaccggaaacagtcgaca
ggtgtagtttccagtgacaggatgtttaggaaaactgcctggaggaacacggtcagtgat
gcactgagtttccgccaggatcaagccctcaacacaactatatttctcctgaaaacctac
ggccccatgggatttctgctcagagaggatggagagaccagaaacttcaaggtgtgcttg
ggtgacccacatacgtgcacttgccctgtgttcaccaaggagcaggagccatgcaaacac
atcttctggattttactgcggaaattcagactaccaagagaacatgactattcatttcaa
aatggacttgtggatagacagatcctggaggtgctccatggtttacaccaaaccagaccc
caccggatggaaaatgatccctctgcagattctgggaccccaagccaaccagtcatgggc
caggaggctggaagtgtctgtcggaaagtgattcaagcccaggatgtgtgtcctatctgt
caagaggagcttctggagaaaaaacagcctgtgtctcactgcaggttcggctgtggcaac
aatgtccacatctcttgcatgaaagtgtgggcagatcaccagaagctctcagacacagaa
gagatggtgaagtgccctctgtgcagggaggacttcagctctttgaagttacttaaggag
caggtgaaaaacgcagaaaagctcttcactgctgctgaaagagagaagccagaaagacac
ctgggtgttctctgtcacatctgccaagtctgccctatcactggcagatgtttcaaatgc
atagtctgcagttacttctatttgtgtgagggatgcgcaaagagaggctgccacccacag
catcagtttgcttcacgaacaaaaagaagagacaagtggcatcttgttgcagaggacctg
agtgatgaaccaaagggagcgacctgtcagccagcaaatgacagcatcatgactgtagct
gcggatcctctacctgaaaatgtgttggggtgtctgcctactgtcagggtgagatcagga
tctcggctcttggacgagggacagcagtgtcggatctgtctgcagaattttaccctgggc
cagcgtgtccgaatcctgccctgtcatcataagttccacatggattgtgtggatgggatc
ttgcggaagacaaactcctgccctttggatggatacgtcatttttaatcccttgatttgg
agaaccagtgaaaggaagacctcccataaattggcatcctgcccttccagtgactctggc
aaaccagaccataacttaaaagacctgtttatcccaggaactgcactgcgggacaggaaa
actagaactgctcctccacatggttctcttcatttagagttgctgacaggctcttcagaa
acttttaacatcccacaaaagttaataagtgaccagtttcttggcttgtgcattaccaca
acagatgctgcaaaaaaagaaggaaaaggagtgctgcagaaaaaacaaagtcttgctttt
cctgaaagcagttgttttgatcagcgaagtaaatctgactcaggtgacagacaaaacacc
tgttcctcaaaaaagacactggcaaaatgcagctctgcctcacctaatatgtttgtacct
gtggcaaaaatcagagagcagccacaggtgaacctttttgtaggtttttgcagatcagaa
gcaagccacacagccactgtggcctttcctgccaggcgaactacactacagccaagaagg
agaggcccgataactgctcaagtcacaaacaagaaacctacttcagagctaagaatgact
ggagtctcgatcaacacacagcatcaccggaacacagaaacttaa
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