Xiphias gladius (swordfish): 120798343
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Entry
120798343 CDS
T07311
Symbol
gtf3c3
Name
(RefSeq) general transcription factor 3C polypeptide 3 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xgl03021
]
120798343 (gtf3c3)
Transcription machinery [BR:
xgl03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
120798343 (gtf3c3)
TFIIIC, fungi type
120798343 (gtf3c3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_16
TPR_19
TPR_12
TPR_CcmH_CycH
TPR_11
TPR_9
TPR_7
TPR_10
TPR_15
ANAPC3
ChAPs
Sel1
HAT_PRP39_N
SHNi-TPR
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
120798343
NCBI-ProteinID:
XP_039998518
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All DBs
Position
LG13:13411786..13427593
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AA seq
943 aa
AA seq
DB search
MSGFSAELIDYLEGRITFEEFDKRRDERRAKESGVLAEDVEDDAQPSTSAQIPGKIEEGV
SPGVQLAFASMLGETPEPPSSEEEEDGEEEDSLSYVDDEDDEDYKAEEEEGEKAELGLAE
KKQRRGGSGAGRRKKKEVEVEVEAEAEDLTVGDVFALEMELNRENKKMMKERRHRSKLPR
ALRGLMGEANIRYARGEKEDAILMCMEIIRQAPLAYEPFSTLAMIYEDDEDMDKALQFSL
IAAHLNPSDCEEWIRLAEMSLEQDNIRQAIVCYTKAIKYDPTNVRYLWERSSLHMRLGEH
KQCMDGYRRILSLLPLEDGEHFMQLSKDMAKSYYESNDLPSALSVVEEALARHPTLVSDD
FINMAAELYIASHQYNKALQVLVQFAGIVLVRGESKSDLTVPTQEEKVAEKTTGEQEKTE
EGAKTVEDIAAEENGAIKHVQVPDTVPVDLRAKLIVCLIHLRVYTPLESLLPSLMEQSPE
EVGDLYLDVGEAYLEKGEYMSALPLLSALVISDKYNLAVVWLRHAECLKALGHMEAAAES
YTKVVGMAPLHLEARLSLATLQQQLGRPECALKALESMYDSDTLSQDSSAAQKELKLLLH
RSTLLKTQGQIQDYLDAMITMISMLLKVAMQRAKVCVRSVTMLGENHLRLVKVKDMLPEI
ADHVAAYLDNTGKTNVLSREDWWQLLVSCVLTLCEVQRYEEAELLVESAMEFYSFYDNKP
RRKELEFFGLSATILDHNYYKAYNYIRLMLMENVDLPQLWNIFNQLTITSQHQRHHRFCL
RLLLKHPDNHALCVLCGHNAMVSGSFKHALGQYVQAFQTHPKNPLHSLCVGLTFFHMASQ
KYVAKRHTLVLQGFSFLWQYVELRGECQESMYNLGRALHQMGLTHLAIHYYQKALTLPAQ
KLEGIADDQVDLRREIAFNLSLIYQASGNVEMARQLINTHCIV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcttcagcgcggagctgatagactacctggagggcaggataactttcgaggag
tttgacaagaggagagacgagcgaagggcaaaggagtcaggggtattagccgaagatgtg
gaggatgatgctcagccctccacctcggctcagatcccgggaaaaatcgaagagggagtc
agcccaggggtccagctggccttcgcctccatgctgggagaaacaccagagccaccatct
tcagaagaggaggaggacggggaagaggaggacagcttgagctatgttgatgacgaagat
gatgaggattacaaggcggaggaggaggagggggaaaaggcagagttggggctggcagag
aagaagcagaggcgaggggggagcggagcggggaggaggaagaagaaagaggtggaggtg
gaggtggaggcggaggcggaggatctgacggtgggagacgtgttcgctctggagatggag
ctgaaccgggaaaacaagaagatgatgaaggagaggcgtcatcgcagcaagctgccccga
gctctgagaggcctgatgggagaagccaacatccgttacgccagaggagagaaagaggac
gccatcttaatgtgtatggagatcataagacaggctcctctggcctatgagcctttctcc
acgttggctatgatctacgaggatgatgaggacatggacaaagcactgcagttcagtctg
atcgctgcccaccttaacccgtcagactgtgaggagtggatcagactggctgaaatgtct
ctggagcaggacaatatccgacaagccatcgtctgctacaccaaagctatcaagtatgac
ccaaccaatgtgcgctacctgtgggagcgctccagcctccatatgcgtctgggtgagcac
aagcagtgcatggacggctaccgcaggatcctgtcgctgctgccgcttgaggacggagag
cacttcatgcagctctccaaggacatggccaagagttactatgagagtaatgacttgccc
tcagctctgagtgtggtagaggaagctctggcgcgacaccccaccctggtcagcgatgac
ttcatcaacatggcagctgagctctatattgccagccaccagtacaacaaggccttgcag
gtcttggtccagtttgcaggtattgttttggttaggggtgaatccaaatcggacttgaca
gtaccaacacaagaagagaaagtggcagagaagacgactggggaacaggagaagactgaa
gaaggcgcaaagactgtagaggatattgcagcagaggagaatggtgcaattaaacatgta
caggtaccagacactgtcccagtggacctgagagccaagctaattgtttgcctcatacac
ctacgcgtctacacgcccctggagagcctgctgccatcgctaatggagcagagtccagag
gaggttggtgacttgtacctagatgtaggtgaagcctacctggagaagggcgagtacatg
tctgctttgcctctactgtctgcccttgtcatatccgacaagtacaacctggctgtcgtc
tggctccgacacgcagaatgtctaaaggcgctgggccacatggaggcagcagcagaaagc
tacacaaaggtggtagggatggccccgctgcacctggaggcccggctctccctggccacc
ctgcagcagcagctgggccggccagagtgtgccctcaaagccctggagtccatgtacgac
agcgacacactgtcacaggattcgtcggctgcacagaaggaattaaagctgcttctgcat
cgttcaacactgctgaagactcagggacaaatacaggattacctggatgctatgatcacc
atgatctccatgctgctaaaggtggccatgcagcgagctaaggtttgtgtacgctctgta
accatgttgggtgagaatcacctgaggctggtaaaggtcaaagacatgctgccagagatt
gctgaccatgtagctgcctatctggacaacactggtaaaaccaacgttctgtccagagag
gactggtggcagctgctggtgagctgcgtactgacgctgtgtgaggtgcagcgctatgag
gaggctgagctgcttgtggagtccgccatggagttctactccttttatgacaacaagccc
aggagaaaagaactggagttcttcggcctgtctgccaccatcttggaccacaactactac
aaggcctacaactatatcagattaatgctgatggaaaatgtggatctacctcagctttgg
aatattttcaaccagttgacgataacctcgcagcaccagcgtcaccatcggttctgtcta
cgtctgctgttaaaacaccctgacaaccacgccttgtgtgtcctctgtggacacaacgcc
atggtgtcaggaagcttcaaacatgctctgggccagtatgtccaggccttccagactcac
cctaagaacccactccacagcctatgtgtgggtctcaccttcttccacatggcatctcag
aagtatgtagccaaacgacatacactggtgctgcagggcttctccttcctgtggcagtac
gtggaactacgtggagagtgtcaggagagcatgtacaacctgggcagagcgctgcaccag
atgggtctcacacatttggccatacattactaccagaaggcacttacactgcctgcacag
aaacttgagggtatcgctgacgatcaagtggatctgagaagggagatcgccttcaacctg
tcactcatttaccaggccagcgggaacgtggagatggctcgccagctcatcaacactcac
tgcatagtttga
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